RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 MEIG1Q5JSS6 88 aa13.03□□□□□ -0.32
PKD1-235ENST00000568591 RPL36ALQ969Q0 106 aaKnown RBP13.03□□□□□ -0.32
PKD1-235ENST00000568591 NDUFV3P56181 108 aaKnown RBP13.02□□□□□ -0.32
PKD1-235ENST00000568591 CDC42SE2Q9NRR3 84 aa13.02□□□□□ -0.32
PKD1-235ENST00000568591 ACANP16112 2415 aa13.02□□□□□ -0.33
PKD1-235ENST00000568591 TRAV25A0A0B4J276 109 aa13.01□□□□□ -0.33
PKD1-235ENST00000568591 IGKV3OR2-268A0A0C4DH90 116 aa13□□□□□ -0.33
PKD1-235ENST00000568591 DEFB113Q30KQ7 82 aa13□□□□□ -0.33
PKD1-235ENST00000568591 GIG44P09565 113 aaPredicted RBP13□□□□□ -0.33
PKD1-235ENST00000568591 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 FN1P02751 2386 aaKnown RBP12.98□□□□□ -0.33
PKD1-235ENST00000568591 CCL24O00175 119 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 GAGE7O76087 117 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 GAGE12FP0CL80 117 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 GAGE12GP0CL81 117 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 GAGE12IP0CL82 117 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 ESM1Q9NQ30 184 aa12.98□□□□□ -0.33
PKD1-235ENST00000568591 CCDC179H3BU77 68 aa12.97□□□□□ -0.33
PKD1-235ENST00000568591 DAZ2Q13117 558 aaKnown RBP12.97□□□□□ -0.33
PKD1-235ENST00000568591 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
PKD1-235ENST00000568591 PPDPFQ9H3Y8 114 aa12.97□□□□□ -0.33
PKD1-235ENST00000568591 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
PKD1-235ENST00000568591 DNAJC9-AS1A6NH13 148 aa12.97□□□□□ -0.33
PKD1-235ENST00000568591 COX7A2LO14548 114 aa12.97□□□□□ -0.33
PKD1-235ENST00000568591 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.33
PKD1-235ENST00000568591 RPL35AP18077 110 aaKnown RBP12.96□□□□□ -0.33
PKD1-235ENST00000568591 FAM19A3Q7Z5A8 133 aa12.96□□□□□ -0.33
PKD1-235ENST00000568591 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.33
PKD1-235ENST00000568591 TRBV10-1A0A0K0K1A3 114 aa12.95□□□□□ -0.34
PKD1-235ENST00000568591 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
PKD1-235ENST00000568591 WIPF1O43516 503 aa12.94□□□□□ -0.34
PKD1-235ENST00000568591 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
PKD1-235ENST00000568591 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
PKD1-235ENST00000568591 UBE2L6O14933 153 aa12.94□□□□□ -0.34
PKD1-235ENST00000568591 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
PKD1-235ENST00000568591 TMEM243Q9BU79 118 aa12.93□□□□□ -0.34
PKD1-235ENST00000568591 C22orf24Q9Y442 160 aa12.93□□□□□ -0.34
PKD1-235ENST00000568591 NBEAL2Q6ZNJ1 2754 aa12.93□□□□□ -0.34
PKD1-235ENST00000568591 IGLV4-60A0A075B6I1 120 aa12.92□□□□□ -0.34
PKD1-235ENST00000568591 Q9HAA7 133 aa12.92□□□□□ -0.34
PKD1-235ENST00000568591 MIR7-3HGQ8N6C7 128 aa12.91□□□□□ -0.34
PKD1-235ENST00000568591 Q6Q795 121 aa12.91□□□□□ -0.34
PKD1-235ENST00000568591 LINC00337Q8N6G1 96 aa12.91□□□□□ -0.34
PKD1-235ENST00000568591 SMCR5Q8TEV8 140 aa12.91□□□□□ -0.34
PKD1-235ENST00000568591 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
PKD1-235ENST00000568591 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
PKD1-235ENST00000568591 FAM240AA0A1B0GVK7 77 aa12.89□□□□□ -0.35
PKD1-235ENST00000568591 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
PKD1-235ENST00000568591 HIST2H2BCQ6DN03 193 aa12.89□□□□□ -0.35
PKD1-235ENST00000568591 BAALC-AS2P0C853 105 aa12.88□□□□□ -0.35
PKD1-235ENST00000568591 CHCHD5Q9BSY4 110 aa12.88□□□□□ -0.35
PKD1-235ENST00000568591 COX7B2Q8TF08 81 aa12.88□□□□□ -0.35
PKD1-235ENST00000568591 TRGV4A0A0C4DH28 118 aa12.87□□□□□ -0.35
PKD1-235ENST00000568591 ZNF843Q8N446 348 aa12.86□□□□□ -0.35
PKD1-235ENST00000568591 C19orf73Q9NVV2 129 aa12.86□□□□□ -0.35
PKD1-235ENST00000568591 C5orf38Q86SI9 138 aa12.85□□□□□ -0.35
PKD1-235ENST00000568591 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
PKD1-235ENST00000568591 SND1-IT1Q9HBX3 110 aa12.85□□□□□ -0.35
PKD1-235ENST00000568591 C9orf129Q5T035 196 aaKnown RBP12.85□□□□□ -0.35
PKD1-235ENST00000568591 CSNK1G2-AS1Q8NCQ2 148 aa12.85□□□□□ -0.35
PKD1-235ENST00000568591 LINC00158P58513 81 aa12.84□□□□□ -0.35
PKD1-235ENST00000568591 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
PKD1-235ENST00000568591 TRACP01848 142 aa12.84□□□□□ -0.35
PKD1-235ENST00000568591 PFN2P35080 140 aa12.84□□□□□ -0.35
PKD1-235ENST00000568591 C3orf56Q8N813 242 aa12.84□□□□□ -0.35
PKD1-235ENST00000568591 COPS9Q8WXC6 57 aa12.84□□□□□ -0.35
PKD1-235ENST00000568591 TENM4Q6N022 2769 aa12.83□□□□□ -0.35
PKD1-235ENST00000568591 A0A087WYN8 130 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 FHL2Q14192 279 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 LRRC75A-AS1Q8N1F1 130 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 LINC01006Q8NI28 216 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 IGHV3OR16-9A0A0B4J2B5 98 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 CRPP02741 224 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 TMEM86BQ8N661 226 aa12.83□□□□□ -0.36
PKD1-235ENST00000568591 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
PKD1-235ENST00000568591 ANK3Q12955 4377 aaKnown RBP12.82□□□□□ -0.36
PKD1-235ENST00000568591 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
PKD1-235ENST00000568591 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
PKD1-235ENST00000568591 CCL18P55774 89 aa12.82□□□□□ -0.36
PKD1-235ENST00000568591 SMIM11BQ8TCY0 68 aa12.82□□□□□ -0.36
PKD1-235ENST00000568591 TRBV7-7A0A0K0K1E9 115 aa12.81□□□□□ -0.36
PKD1-235ENST00000568591 ATP5G1P05496 136 aa12.81□□□□□ -0.36
PKD1-235ENST00000568591 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
PKD1-235ENST00000568591 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
PKD1-235ENST00000568591 RPL28P46779 137 aaKnown RBP12.81□□□□□ -0.36
PKD1-235ENST00000568591 TMEM126AQ9H061 195 aa12.81□□□□□ -0.36
PKD1-235ENST00000568591 ITPR2Q14571 2701 aa12.81□□□□□ -0.36
PKD1-235ENST00000568591 VWFP04275 2813 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 TRAV13-2A0A0B4J235 113 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 FAM236AA0A1B0GUQ0 79 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 FAM236BA0A1B0GV22 79 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 CLPSL2Q6UWE3 100 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
PKD1-235ENST00000568591 GAGE2AQ6NT46 116 aa12.78□□□□□ -0.36
PKD1-235ENST00000568591 PDZD2O15018 2839 aa12.77□□□□□ -0.36
PKD1-235ENST00000568591 A0A096LPF7 62 aa12.77□□□□□ -0.37
PKD1-235ENST00000568591 MALP21145 153 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms