RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TRGV3P03979 118 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 CD7P09564 240 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 FXYD7P58549 80 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 CKS1BP61024 79 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 Q6Q795 121 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 SCGB1D4Q6XE38 83 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 SLC25A29Q8N8R3 303 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 PLEKHB2Q96CS7 222 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 C9orf85Q96MD7 179 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 GTSF1LQ9H1H1 148 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 EDA2RQ9HAV5 297 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 ZNF256Q9Y2P7 627 aaPredicted RBP2.91□□□□□ -1.94
LINC00561-201ENST00000565815 H3BVH4 76 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 K7EMT4 169 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 C10orf126Q8N4M7 172 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 ZFAND2AQ8N6M9 145 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 TRAV41A0A0B4J266 112 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 A0A0J9YY99 117 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 TRBV27A0A0K0K1C4 114 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 FAM168BA1KXE4 195 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 IGIPA6NJ69 53 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 LGALS9O00182 355 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 LEPROTO15243 131 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 TSPAN13O95857 204 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
LINC00561-201ENST00000565815 CLEC19AQ6UXS0 136 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 C5orf56Q8N8D9 126 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 TM2D3Q9BRN9 247 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 PRO1854Q9UHT4 67 aa2.91□□□□□ -1.94
LINC00561-201ENST00000565815 TGP01266 2768 aa2.9□□□□□ -1.94
LINC00561-201ENST00000565815 NOTCH1P46531 2555 aa2.9□□□□□ -1.94
LINC00561-201ENST00000565815 KLLNB2CW77 178 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 ZNF688P0C7X2 276 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 RBMY1CP0DJD4 496 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 SCGB1C2P0DMR2 95 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 GPHB5Q86YW7 130 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 RNF182Q8N6D2 247 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 KIF25-AS1Q9Y6Z4 181 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 S4R3C0 116 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 WNK2Q9Y3S1 2297 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-30P01768 117 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-30-5P0DP03 117 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 LGALS3P17931 250 aaKnown RBP2.9□□□□□ -1.95
LINC00561-201ENST00000565815 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
LINC00561-201ENST00000565815 LY6EQ16553 131 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 HIGD2BQ4VC39 106 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 ZFP2Q6ZN57 461 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 Q6ZUT4 128 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 SH2D6Q7Z4S9 175 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 TTTY13Q9BZ97 58 aa2.9□□□□□ -1.95
LINC00561-201ENST00000565815 IGLV4-69A0A075B6H9 119 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 IGHV3-23P01764 117 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 SPINK8P0C7L1 97 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 RNASE4P34096 147 aaKnown RBP2.89□□□□□ -1.95
LINC00561-201ENST00000565815 RPL13AP40429 203 aaKnown RBP2.89□□□□□ -1.95
LINC00561-201ENST00000565815 PSMB2P49721 201 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 ATXN8Q156A1 80 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 COPS9Q8WXC6 57 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 PTH2Q96A98 100 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 PPDPFQ9H3Y8 114 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 GEMIN7Q9H840 131 aaKnown RBP2.89□□□□□ -1.95
LINC00561-201ENST00000565815 ERG28Q9UKR5 140 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 TRRAPQ9Y4A5 3859 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 TRAV26-2A0A0B4J265 109 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 LOC107984156A0A0G2JMH3 177 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 A0A0J9YXY3 114 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 TRBV30A0A0K0K1B3 111 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 FAM240AA0A1B0GVK7 77 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 J3QQQ9 107 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 TIMM17BO60830 172 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 CRYGDP07320 174 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 MGPP08493 103 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 RNASE3P12724 160 aaKnown RBP2.89□□□□□ -1.95
LINC00561-201ENST00000565815 DLX1P56177 255 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
LINC00561-201ENST00000565815 ZFAND6Q6FIF0 208 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 LINC00336Q6ZUF6 198 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 ARL17AQ8IVW1 177 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 C14orf178Q8N769 122 aaPredicted RBP2.89□□□□□ -1.95
LINC00561-201ENST00000565815 TP53TG1Q9Y2A0 90 aa2.89□□□□□ -1.95
LINC00561-201ENST00000565815 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 H3BT86 120 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 M0R2P5 195 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 IGHG2P01859 326 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 IFITM1P13164 125 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 LINC00315P59091 139 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 AMTNQ6UX39 209 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 DAZ1Q9NQZ3 744 aaKnown RBP2.88□□□□□ -1.95
LINC00561-201ENST00000565815 SPANXCQ9NY87 97 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 ARHGAP32A7KAX9 2087 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 SLC25A20O43772 301 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 COX6CP09669 75 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 KRTAP10-5P60370 271 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 PRR9Q5T870 116 aa2.88□□□□□ -1.95
LINC00561-201ENST00000565815 RPL39LQ96EH5 51 aaKnown RBP2.88□□□□□ -1.95
LINC00561-201ENST00000565815 TENM1Q9UKZ4 2725 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 LOC100131303A0A0U1RQF7 123 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 NUPR2A6NF83 97 aa2.87□□□□□ -1.95
LINC00561-201ENST00000565815 I3L3M4 83 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms