RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
SPG7-209ENST00000564047 TAX1BP3O14907 124 aa8.8□□□□□ -1
SPG7-209ENST00000564047 DGAT2L7PQ6IED9 249 aa8.8□□□□□ -1
SPG7-209ENST00000564047 OR5A1Q8NGJ0 315 aa8.8□□□□□ -1
SPG7-209ENST00000564047 TMEM101Q96IK0 257 aa8.8□□□□□ -1
SPG7-209ENST00000564047 DNAH10Q8IVF4 4471 aa8.79□□□□□ -1
SPG7-209ENST00000564047 DNAH10OSP0CZ25 163 aa8.79□□□□□ -1
SPG7-209ENST00000564047 RBX1P62877 108 aa8.79□□□□□ -1
SPG7-209ENST00000564047 MRPS36P82909 103 aaKnown RBP8.79□□□□□ -1
SPG7-209ENST00000564047 PMVKQ15126 192 aa8.79□□□□□ -1
SPG7-209ENST00000564047 TAL2Q16559 108 aa8.79□□□□□ -1
SPG7-209ENST00000564047 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
SPG7-209ENST00000564047 KIAA1109Q2LD37 5005 aa8.79□□□□□ -1
SPG7-209ENST00000564047 IGLV4-3A0A075B6K6 122 aa8.78□□□□□ -1
SPG7-209ENST00000564047 E9PLD3 99 aa8.78□□□□□ -1
SPG7-209ENST00000564047 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
SPG7-209ENST00000564047 IGLV4-60A0A075B6I1 120 aa8.77□□□□□ -1.01
SPG7-209ENST00000564047 H3BRM9 83 aa8.77□□□□□ -1.01
SPG7-209ENST00000564047 Q6ZUT4 128 aa8.77□□□□□ -1.01
SPG7-209ENST00000564047 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
SPG7-209ENST00000564047 CHAC1Q9BUX1 264 aa8.77□□□□□ -1.01
SPG7-209ENST00000564047 Q9H8V8 135 aa8.77□□□□□ -1.01
SPG7-209ENST00000564047 IGHV3-30P01768 117 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 IGHV3-33P01772 117 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 IGHV3-30-3P0DP02 117 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 IGHV3-30-5P0DP03 117 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 HERVK_113P61574 105 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 Q8N3U1 123 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
SPG7-209ENST00000564047 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
SPG7-209ENST00000564047 IGLV4-69A0A075B6H9 119 aa8.75□□□□□ -1.01
SPG7-209ENST00000564047 K7EP13 123 aa8.75□□□□□ -1.01
SPG7-209ENST00000564047 AMELXQ99217 191 aa8.75□□□□□ -1.01
SPG7-209ENST00000564047 VCX2Q9H322 139 aa8.75□□□□□ -1.01
SPG7-209ENST00000564047 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
SPG7-209ENST00000564047 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
SPG7-209ENST00000564047 ANGP03950 147 aaKnown RBP8.74□□□□□ -1.01
SPG7-209ENST00000564047 NFE4Q86UQ8 179 aa8.74□□□□□ -1.01
SPG7-209ENST00000564047 TM2D2Q9BX73 214 aa8.74□□□□□ -1.01
SPG7-209ENST00000564047 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
SPG7-209ENST00000564047 LINC00269Q8N2A0 174 aa8.73□□□□□ -1.01
SPG7-209ENST00000564047 C10orf126Q8N4M7 172 aa8.73□□□□□ -1.01
SPG7-209ENST00000564047 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
SPG7-209ENST00000564047 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
SPG7-209ENST00000564047 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
SPG7-209ENST00000564047 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
SPG7-209ENST00000564047 LY6G6CO95867 125 aa8.72□□□□□ -1.01
SPG7-209ENST00000564047 REG3AQ06141 175 aa8.72□□□□□ -1.01
SPG7-209ENST00000564047 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
SPG7-209ENST00000564047 C9orf118A6NHY6 69 aa8.71□□□□□ -1.02
SPG7-209ENST00000564047 IBA57-AS1B1ANH7 110 aa8.71□□□□□ -1.02
SPG7-209ENST00000564047 PTTG1IPP53801 180 aa8.71□□□□□ -1.02
SPG7-209ENST00000564047 VAMP3Q15836 100 aa8.71□□□□□ -1.02
SPG7-209ENST00000564047 Q6ZVH6 145 aa8.71□□□□□ -1.02
SPG7-209ENST00000564047 CEND1Q8N111 149 aa8.71□□□□□ -1.02
SPG7-209ENST00000564047 CCL25O15444 150 aa8.7□□□□□ -1.02
SPG7-209ENST00000564047 CRPP02741 224 aa8.7□□□□□ -1.02
SPG7-209ENST00000564047 UBE2D1P51668 147 aa8.7□□□□□ -1.02
SPG7-209ENST00000564047 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
SPG7-209ENST00000564047 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
SPG7-209ENST00000564047 UBE2WQ96B02 151 aa8.7□□□□□ -1.02
SPG7-209ENST00000564047 NBDYA0A0U1RRE5 68 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 GCSHP23434 173 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 MIAQ16674 131 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 CLPSL2Q6UWE3 100 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
SPG7-209ENST00000564047 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
SPG7-209ENST00000564047 TRAV8-4A0A0B4J246 113 aa8.68□□□□□ -1.02
SPG7-209ENST00000564047 IGKV3OR2-268A0A0C4DH90 116 aa8.68□□□□□ -1.02
SPG7-209ENST00000564047 FXYD2P54710 66 aa8.68□□□□□ -1.02
SPG7-209ENST00000564047 SS18Q15532 418 aa8.68□□□□□ -1.02
SPG7-209ENST00000564047 VPS13DQ5THJ4 4388 aa8.68□□□□□ -1.02
SPG7-209ENST00000564047 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
SPG7-209ENST00000564047 TMEM223A0PJW6 202 aa8.67□□□□□ -1.02
SPG7-209ENST00000564047 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
SPG7-209ENST00000564047 LEPROTO15243 131 aa8.67□□□□□ -1.02
SPG7-209ENST00000564047 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
SPG7-209ENST00000564047 KRTAP1-5Q9BYS1 174 aa8.67□□□□□ -1.02
SPG7-209ENST00000564047 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 A0A1B0GWB2 263 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
SPG7-209ENST00000564047 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 LINC00242Q5T6M2 205 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 GTF2H5Q6ZYL4 71 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
SPG7-209ENST00000564047 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
SPG7-209ENST00000564047 HERVK_113P63121 156 aa8.65□□□□□ -1.02
SPG7-209ENST00000564047 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.02
SPG7-209ENST00000564047 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 TMEM238LA0A1B0GVL6 79 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 A0A1W2PPM0 123 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 A6NJY4 79 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 J3QQQ9 107 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 K7EP34 96 aa8.64□□□□□ -1.03
SPG7-209ENST00000564047 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
SPG7-209ENST00000564047 CD164L2Q6UWJ8 174 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms