RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 IFITM10A6NMD0 228 aa10.65□□□□□ -0.7
CDT1-202ENST00000562747 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.7
CDT1-202ENST00000562747 NPSP0C0P6 89 aa10.65□□□□□ -0.7
CDT1-202ENST00000562747 SDIM1Q6ZPB5 146 aa10.65□□□□□ -0.7
CDT1-202ENST00000562747 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.7
CDT1-202ENST00000562747 PRSS3P2Q8NHM4 247 aa10.65□□□□□ -0.7
CDT1-202ENST00000562747 MALP21145 153 aa10.64□□□□□ -0.71
CDT1-202ENST00000562747 SCXQ7RTU7 201 aa10.64□□□□□ -0.71
CDT1-202ENST00000562747 Q6ZN92 141 aa10.63□□□□□ -0.71
CDT1-202ENST00000562747 TEX43Q6ZNM6 134 aa10.63□□□□□ -0.71
CDT1-202ENST00000562747 TRAPPC1Q9Y5R8 145 aa10.63□□□□□ -0.71
CDT1-202ENST00000562747 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
CDT1-202ENST00000562747 IGIPA6NJ69 53 aa10.62□□□□□ -0.71
CDT1-202ENST00000562747 ZNF561-AS1K7EIQ3 104 aa10.62□□□□□ -0.71
CDT1-202ENST00000562747 APOMO95445 188 aa10.62□□□□□ -0.71
CDT1-202ENST00000562747 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
CDT1-202ENST00000562747 C5orf38Q86SI9 138 aa10.62□□□□□ -0.71
CDT1-202ENST00000562747 CIRBP-AS1Q8TBR5 109 aa10.62□□□□□ -0.71
CDT1-202ENST00000562747 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
CDT1-202ENST00000562747 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
CDT1-202ENST00000562747 TOMM6Q96B49 74 aa10.61□□□□□ -0.71
CDT1-202ENST00000562747 C2orf88Q9BSF0 95 aa10.61□□□□□ -0.71
CDT1-202ENST00000562747 FAT3Q8TDW7 4589 aa10.61□□□□□ -0.71
CDT1-202ENST00000562747 PAPPA-AS1Q5QFB9 102 aa10.6□□□□□ -0.71
CDT1-202ENST00000562747 SLC7A5P1Q8MH63 180 aa10.6□□□□□ -0.71
CDT1-202ENST00000562747 AMELXQ99217 191 aa10.6□□□□□ -0.71
CDT1-202ENST00000562747 TIMM17AQ99595 171 aa10.6□□□□□ -0.71
CDT1-202ENST00000562747 VCX2Q9H322 139 aa10.6□□□□□ -0.71
CDT1-202ENST00000562747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.6□□□□□ -0.71
CDT1-202ENST00000562747 UBR4Q5T4S7 5183 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
CDT1-202ENST00000562747 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
CDT1-202ENST00000562747 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 FA2HQ7L5A8 372 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 LINC00526Q96FQ7 95 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 CARD19Q96LW7 228 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 YPEL4Q96NS1 127 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 SMCO4Q9NRQ5 59 aa10.59□□□□□ -0.71
CDT1-202ENST00000562747 IGLV4-69A0A075B6H9 119 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 UBE2D1P51668 147 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 SYCNQ0VAF6 134 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 ERASQ7Z444 233 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 OR10D4PQ8NGN7 298 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 PKIGQ9Y2B9 76 aa10.58□□□□□ -0.72
CDT1-202ENST00000562747 PANO1I0J062 215 aa10.57□□□□□ -0.72
CDT1-202ENST00000562747 COX6A2Q02221 97 aa10.57□□□□□ -0.72
CDT1-202ENST00000562747 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
CDT1-202ENST00000562747 A0A087WZ39 114 aa10.56□□□□□ -0.72
CDT1-202ENST00000562747 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
CDT1-202ENST00000562747 C18orf32Q8TCD1 76 aa10.56□□□□□ -0.72
CDT1-202ENST00000562747 SCGB3A1Q96QR1 104 aa10.56□□□□□ -0.72
CDT1-202ENST00000562747 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
CDT1-202ENST00000562747 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
CDT1-202ENST00000562747 ZC2HC1BQ5TFG8 222 aa10.55□□□□□ -0.72
CDT1-202ENST00000562747 SPACA4Q8TDM5 124 aa10.55□□□□□ -0.72
CDT1-202ENST00000562747 ORAOV1Q8WV07 137 aa10.55□□□□□ -0.72
CDT1-202ENST00000562747 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
CDT1-202ENST00000562747 F8WDY8 70 aa10.54□□□□□ -0.72
CDT1-202ENST00000562747 SEC11AP67812 179 aa10.54□□□□□ -0.72
CDT1-202ENST00000562747 CBLN2Q8IUK8 224 aa10.54□□□□□ -0.72
CDT1-202ENST00000562747 LINC01561Q8N1V8 128 aa10.54□□□□□ -0.72
CDT1-202ENST00000562747 LINC00614P0C842 121 aa10.53□□□□□ -0.72
CDT1-202ENST00000562747 CHTF8P0CG12 524 aa10.53□□□□□ -0.72
CDT1-202ENST00000562747 Q6ZRU5 148 aa10.53□□□□□ -0.72
CDT1-202ENST00000562747 DPH3Q96FX2 82 aa10.53□□□□□ -0.72
CDT1-202ENST00000562747 RAB5BP61020 215 aa10.52□□□□□ -0.73
CDT1-202ENST00000562747 SERTAD4-AS1Q5TG53 156 aa10.52□□□□□ -0.73
CDT1-202ENST00000562747 URB1-AS1Q96HZ7 61 aa10.52□□□□□ -0.73
CDT1-202ENST00000562747 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.73
CDT1-202ENST00000562747 A0A087WYN8 130 aa10.51□□□□□ -0.73
CDT1-202ENST00000562747 HERVK_113P63121 156 aa10.51□□□□□ -0.73
CDT1-202ENST00000562747 A0A096LNI7 61 aa10.5□□□□□ -0.73
CDT1-202ENST00000562747 IGKV2-24A0A0C4DH68 120 aa10.5□□□□□ -0.73
CDT1-202ENST00000562747 RNF151Q2KHN1 245 aa10.5□□□□□ -0.73
CDT1-202ENST00000562747 MAJINQ3KP22 176 aa10.5□□□□□ -0.73
CDT1-202ENST00000562747 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
CDT1-202ENST00000562747 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
CDT1-202ENST00000562747 A0A096LNJ9 63 aa10.49□□□□□ -0.73
CDT1-202ENST00000562747 LOC107984640A0A0U1RRK4 108 aa10.49□□□□□ -0.73
CDT1-202ENST00000562747 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.49□□□□□ -0.73
CDT1-202ENST00000562747 NDUFA1O15239 70 aa10.49□□□□□ -0.73
CDT1-202ENST00000562747 GEMIN7Q9H840 131 aaKnown RBP10.49□□□□□ -0.73
CDT1-202ENST00000562747 HBDP02042 147 aa10.48□□□□□ -0.73
CDT1-202ENST00000562747 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
CDT1-202ENST00000562747 PMVKQ15126 192 aa10.48□□□□□ -0.73
CDT1-202ENST00000562747 CST9LQ9H4G1 147 aa10.48□□□□□ -0.73
CDT1-202ENST00000562747 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
CDT1-202ENST00000562747 OXTP01178 125 aa10.47□□□□□ -0.73
CDT1-202ENST00000562747 CDKN2A-AS1Q9UH64 79 aa10.47□□□□□ -0.73
CDT1-202ENST00000562747 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.73
CDT1-202ENST00000562747 PTTG1IPP53801 180 aa10.46□□□□□ -0.73
CDT1-202ENST00000562747 STPG4Q8N801 248 aa10.46□□□□□ -0.73
CDT1-202ENST00000562747 CHCHD1Q96BP2 118 aaKnown RBP10.46□□□□□ -0.73
CDT1-202ENST00000562747 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.73
CDT1-202ENST00000562747 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
CDT1-202ENST00000562747 PDZD11Q5EBL8 140 aa10.45□□□□□ -0.74
CDT1-202ENST00000562747 PACRGQ96M98 296 aaPredicted RBP10.45□□□□□ -0.74
CDT1-202ENST00000562747 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
CDT1-202ENST00000562747 TRGC2P03986 189 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms