RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 SPANXA1Q9NS26 97 aa11.65□□□□□ -0.54
CPT1A-207ENST00000561996 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
CPT1A-207ENST00000561996 MT1HL1P0DM35 61 aa11.64□□□□□ -0.55
CPT1A-207ENST00000561996 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
CPT1A-207ENST00000561996 IMMP2LQ96T52 175 aa11.64□□□□□ -0.55
CPT1A-207ENST00000561996 PLA2G2DQ9UNK4 145 aa11.64□□□□□ -0.55
CPT1A-207ENST00000561996 LOC107984640A0A0U1RRK4 108 aa11.63□□□□□ -0.55
CPT1A-207ENST00000561996 D6R8Y8 96 aa11.63□□□□□ -0.55
CPT1A-207ENST00000561996 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
CPT1A-207ENST00000561996 S100A1P23297 94 aa11.62□□□□□ -0.55
CPT1A-207ENST00000561996 PTTG1IPP53801 180 aa11.62□□□□□ -0.55
CPT1A-207ENST00000561996 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
CPT1A-207ENST00000561996 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
CPT1A-207ENST00000561996 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
CPT1A-207ENST00000561996 C5orf38Q86SI9 138 aa11.61□□□□□ -0.55
CPT1A-207ENST00000561996 ORMDL3Q8N138 153 aa11.61□□□□□ -0.55
CPT1A-207ENST00000561996 F8WDY8 70 aa11.6□□□□□ -0.55
CPT1A-207ENST00000561996 NPYP01303 97 aa11.6□□□□□ -0.55
CPT1A-207ENST00000561996 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
CPT1A-207ENST00000561996 OR10D4PQ8NGN7 298 aa11.6□□□□□ -0.55
CPT1A-207ENST00000561996 RPS10P5Q9NQ39 176 aa11.6□□□□□ -0.55
CPT1A-207ENST00000561996 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
CPT1A-207ENST00000561996 RNF151Q2KHN1 245 aa11.59□□□□□ -0.55
CPT1A-207ENST00000561996 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
CPT1A-207ENST00000561996 RAB5AP20339 215 aa11.58□□□□□ -0.56
CPT1A-207ENST00000561996 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
CPT1A-207ENST00000561996 Q6ZRP5 223 aa11.58□□□□□ -0.56
CPT1A-207ENST00000561996 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
CPT1A-207ENST00000561996 LAMTOR2Q9Y2Q5 125 aa11.58□□□□□ -0.56
CPT1A-207ENST00000561996 IGHV3OR16-9A0A0B4J2B5 98 aa11.57□□□□□ -0.56
CPT1A-207ENST00000561996 SPINK6Q6UWN8 80 aa11.57□□□□□ -0.56
CPT1A-207ENST00000561996 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
CPT1A-207ENST00000561996 PRELID3AQ96N28 172 aa11.57□□□□□ -0.56
CPT1A-207ENST00000561996 IFITM10A6NMD0 228 aa11.56□□□□□ -0.56
CPT1A-207ENST00000561996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
CPT1A-207ENST00000561996 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
CPT1A-207ENST00000561996 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
CPT1A-207ENST00000561996 PRSS47A8MTI9 375 aa11.55□□□□□ -0.56
CPT1A-207ENST00000561996 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
CPT1A-207ENST00000561996 MRPL35Q9NZE8 188 aaKnown RBP11.55□□□□□ -0.56
CPT1A-207ENST00000561996 TNXBP22105 4242 aa11.55□□□□□ -0.56
CPT1A-207ENST00000561996 ORAOV1Q8WV07 137 aa11.54□□□□□ -0.56
CPT1A-207ENST00000561996 S100PP25815 95 aa11.53□□□□□ -0.56
CPT1A-207ENST00000561996 REG3GQ6UW15 175 aa11.53□□□□□ -0.56
CPT1A-207ENST00000561996 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
CPT1A-207ENST00000561996 OPRPNQ99935 248 aaPredicted RBP11.53□□□□□ -0.56
CPT1A-207ENST00000561996 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
CPT1A-207ENST00000561996 A0A1W2PNN7 141 aa11.52□□□□□ -0.57
CPT1A-207ENST00000561996 RPL18AQ02543 176 aaKnown RBP11.52□□□□□ -0.57
CPT1A-207ENST00000561996 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPT1A-207ENST00000561996 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
CPT1A-207ENST00000561996 MAP1LC3AQ9H492 121 aa11.52□□□□□ -0.57
CPT1A-207ENST00000561996 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
CPT1A-207ENST00000561996 NDUFA1O15239 70 aa11.51□□□□□ -0.57
CPT1A-207ENST00000561996 A0A087WZ39 114 aa11.5□□□□□ -0.57
CPT1A-207ENST00000561996 K7EMI3 77 aa11.5□□□□□ -0.57
CPT1A-207ENST00000561996 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
CPT1A-207ENST00000561996 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
CPT1A-207ENST00000561996 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
CPT1A-207ENST00000561996 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
CPT1A-207ENST00000561996 UBR4Q5T4S7 5183 aa11.49□□□□□ -0.57
CPT1A-207ENST00000561996 NPSP0C0P6 89 aa11.48□□□□□ -0.57
CPT1A-207ENST00000561996 LINC00242Q5T6M2 205 aa11.48□□□□□ -0.57
CPT1A-207ENST00000561996 LINC01561Q8N1V8 128 aa11.48□□□□□ -0.57
CPT1A-207ENST00000561996 Q8N8P6 123 aa11.48□□□□□ -0.57
CPT1A-207ENST00000561996 CYSLTR1Q9Y271 337 aa11.48□□□□□ -0.57
CPT1A-207ENST00000561996 COX19Q49B96 90 aa11.47□□□□□ -0.57
CPT1A-207ENST00000561996 ORMDL2Q53FV1 153 aa11.47□□□□□ -0.57
CPT1A-207ENST00000561996 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
CPT1A-207ENST00000561996 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
CPT1A-207ENST00000561996 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
CPT1A-207ENST00000561996 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
CPT1A-207ENST00000561996 Q6ZN92 141 aa11.46□□□□□ -0.57
CPT1A-207ENST00000561996 MT-ND6P03923 174 aa11.45□□□□□ -0.58
CPT1A-207ENST00000561996 C2orf66Q6UXQ4 117 aa11.45□□□□□ -0.58
CPT1A-207ENST00000561996 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
CPT1A-207ENST00000561996 PSORS1C2Q9UIG4 136 aa11.45□□□□□ -0.58
CPT1A-207ENST00000561996 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 G0S2P27469 103 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 UBE2D1P51668 147 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 KIAA0087Q14695 138 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 C10orf25Q5T742 122 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
CPT1A-207ENST00000561996 C6orf48Q9UBA6 75 aa11.44□□□□□ -0.58
CPT1A-207ENST00000561996 AMELXQ99217 191 aa11.43□□□□□ -0.58
CPT1A-207ENST00000561996 VCX2Q9H322 139 aa11.43□□□□□ -0.58
CPT1A-207ENST00000561996 COLCA2A8K830 154 aa11.42□□□□□ -0.58
CPT1A-207ENST00000561996 SCO1O75880 301 aa11.42□□□□□ -0.58
CPT1A-207ENST00000561996 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
CPT1A-207ENST00000561996 PHF5AQ7RTV0 110 aaKnown RBP11.42□□□□□ -0.58
CPT1A-207ENST00000561996 IGIPA6NJ69 53 aa11.4□□□□□ -0.58
CPT1A-207ENST00000561996 C1orf137Q5JT78 98 aa11.4□□□□□ -0.58
CPT1A-207ENST00000561996 FAM19A3Q7Z5A8 133 aa11.4□□□□□ -0.58
CPT1A-207ENST00000561996 PACRGQ96M98 296 aaPredicted RBP11.4□□□□□ -0.58
CPT1A-207ENST00000561996 NDUFC2-KCTD14E9PQ53 114 aa11.39□□□□□ -0.59
CPT1A-207ENST00000561996 SEC11AP67812 179 aa11.39□□□□□ -0.59
CPT1A-207ENST00000561996 LINC00173Q6ZV60 143 aa11.39□□□□□ -0.59
CPT1A-207ENST00000561996 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms