RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
HERC1-205ENST00000559886 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.09
HERC1-205ENST00000559886 K7EP13 123 aa8.21□□□□□ -1.09
HERC1-205ENST00000559886 LINC00469Q8N7U9 141 aa8.21□□□□□ -1.09
HERC1-205ENST00000559886 CDKN2A-AS1Q9UH64 79 aa8.21□□□□□ -1.09
HERC1-205ENST00000559886 PAM16Q9Y3D7 125 aa8.21□□□□□ -1.09
HERC1-205ENST00000559886 IGHV3OR16-9A0A0B4J2B5 98 aa8.21□□□□□ -1.1
HERC1-205ENST00000559886 MIAQ16674 131 aa8.21□□□□□ -1.1
HERC1-205ENST00000559886 C10orf126Q8N4M7 172 aa8.21□□□□□ -1.1
HERC1-205ENST00000559886 IGLV10-54A0A075B6I4 117 aa8.2□□□□□ -1.1
HERC1-205ENST00000559886 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
HERC1-205ENST00000559886 IBA57-AS1B1ANH7 110 aa8.2□□□□□ -1.1
HERC1-205ENST00000559886 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
HERC1-205ENST00000559886 XCL1P47992 114 aa8.2□□□□□ -1.1
HERC1-205ENST00000559886 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
HERC1-205ENST00000559886 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
HERC1-205ENST00000559886 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
HERC1-205ENST00000559886 CD164L2Q6UWJ8 174 aa8.19□□□□□ -1.1
HERC1-205ENST00000559886 H3BRM9 83 aa8.19□□□□□ -1.1
HERC1-205ENST00000559886 TRAV8-3A0A0A6YYJ7 113 aa8.18□□□□□ -1.1
HERC1-205ENST00000559886 HERVK_113P61574 105 aa8.18□□□□□ -1.1
HERC1-205ENST00000559886 A0A087WZ39 114 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 E9PLD3 99 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 KRTAP1-5Q9BYS1 174 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 FOXI1Q12951 378 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 KRTAP26-1Q6PEX3 210 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
HERC1-205ENST00000559886 GAGE12HA6NDE8 117 aa8.16□□□□□ -1.1
HERC1-205ENST00000559886 SMIM1B2RUZ4 78 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 Q9HAA7 133 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 IGHV1-58A0A0C4DH39 117 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 IGLV5-39A0A0G2JS06 123 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 COX7A2LO14548 114 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
HERC1-205ENST00000559886 IGHV3-64A0A075B6Q5 118 aa8.14□□□□□ -1.11
HERC1-205ENST00000559886 NBDYA0A0U1RRE5 68 aa8.14□□□□□ -1.11
HERC1-205ENST00000559886 NMUP48645 174 aa8.14□□□□□ -1.11
HERC1-205ENST00000559886 IGKV2D-24A0A075B6R9 120 aa8.14□□□□□ -1.11
HERC1-205ENST00000559886 LEPROTO15243 131 aa8.14□□□□□ -1.11
HERC1-205ENST00000559886 ALMS1Q8TCU4 4167 aa8.13□□□□□ -1.11
HERC1-205ENST00000559886 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
HERC1-205ENST00000559886 PLEKHB2Q96CS7 222 aa8.13□□□□□ -1.11
HERC1-205ENST00000559886 RMI2Q96E14 147 aa8.13□□□□□ -1.11
HERC1-205ENST00000559886 C14orf144Q96I85 54 aa8.13□□□□□ -1.11
HERC1-205ENST00000559886 COX8AP10176 69 aa8.12□□□□□ -1.11
HERC1-205ENST00000559886 TSPEAR-AS2P59090 65 aa8.12□□□□□ -1.11
HERC1-205ENST00000559886 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
HERC1-205ENST00000559886 PRO1933Q9H354 126 aa8.12□□□□□ -1.11
HERC1-205ENST00000559886 J3QQQ9 107 aa8.12□□□□□ -1.11
HERC1-205ENST00000559886 LY6G6CO95867 125 aa8.11□□□□□ -1.11
HERC1-205ENST00000559886 MALP21145 153 aa8.11□□□□□ -1.11
HERC1-205ENST00000559886 TTTY13Q9BZ97 58 aa8.11□□□□□ -1.11
HERC1-205ENST00000559886 KMT2AQ03164 3969 aa8.11□□□□□ -1.11
HERC1-205ENST00000559886 DNAH6Q9C0G6 4158 aa8.11□□□□□ -1.11
HERC1-205ENST00000559886 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
HERC1-205ENST00000559886 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
HERC1-205ENST00000559886 MAPKAPK5-AS1Q8N8E1 139 aa8.1□□□□□ -1.11
HERC1-205ENST00000559886 COX11Q9Y6N1 276 aa8.1□□□□□ -1.11
HERC1-205ENST00000559886 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
HERC1-205ENST00000559886 DLEU1O43261 78 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 APOMO95445 188 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 Q6ZR54 194 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 ORAOV1Q8WV07 137 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.11
HERC1-205ENST00000559886 MYMXA0A1B0GTQ4 84 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 M0R2N4 97 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 Q8IZM0 81 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 MIEN1Q9BRT3 115 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 TOMM7Q9P0U1 55 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 TP73-AS1Q9UF72 201 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 ZNF815PA8K554 130 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 NDUFA12Q9UI09 145 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 DNAH10Q8IVF4 4471 aa8.08□□□□□ -1.12
HERC1-205ENST00000559886 KIAA0087Q14695 138 aa8.07□□□□□ -1.12
HERC1-205ENST00000559886 C15orf56Q8N910 161 aa8.07□□□□□ -1.12
HERC1-205ENST00000559886 NDUFA1O15239 70 aa8.06□□□□□ -1.12
HERC1-205ENST00000559886 PRSS2P07478 247 aa8.06□□□□□ -1.12
HERC1-205ENST00000559886 C6orf226Q5I0X4 101 aa8.06□□□□□ -1.12
HERC1-205ENST00000559886 ZNF625Q96I27 306 aaPredicted RBP8.06□□□□□ -1.12
HERC1-205ENST00000559886 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
HERC1-205ENST00000559886 CFAP161Q6P656 301 aa8.05□□□□□ -1.12
HERC1-205ENST00000559886 Q6ZRN7 208 aaPredicted RBP8.05□□□□□ -1.12
HERC1-205ENST00000559886 GVQW2A0A096LPI5 108 aaPredicted RBP8.04□□□□□ -1.12
HERC1-205ENST00000559886 PSCAO43653 123 aa8.04□□□□□ -1.12
HERC1-205ENST00000559886 C2orf91Q6ZV80 131 aa8.04□□□□□ -1.12
HERC1-205ENST00000559886 USP17L23D6RBM5 183 aa8.04□□□□□ -1.12
HERC1-205ENST00000559886 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
HERC1-205ENST00000559886 ZNF561-AS1K7EIQ3 104 aa8.03□□□□□ -1.12
HERC1-205ENST00000559886 CXCL5P42830 114 aa8.03□□□□□ -1.12
HERC1-205ENST00000559886 CKS1BP61024 79 aa8.03□□□□□ -1.12
HERC1-205ENST00000559886 HERV-K104P63124 156 aa8.03□□□□□ -1.12
HERC1-205ENST00000559886 HIGD2BQ4VC39 106 aa8.03□□□□□ -1.12
HERC1-205ENST00000559886 C6orf223Q8N319 242 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms