RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 TMEM238LA0A1B0GVL6 79 aa9.87□□□□□ -0.83
RABGGTA-209ENST00000559551 A6NJY4 79 aa9.87□□□□□ -0.83
RABGGTA-209ENST00000559551 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
RABGGTA-209ENST00000559551 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
RABGGTA-209ENST00000559551 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 TMEM141Q96I45 108 aa9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 PRSS29PA6NIE9 313 aa9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 LINC01549A6NIU2 74 aa9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 Q6ZUT4 128 aa9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
RABGGTA-209ENST00000559551 H3BNG1 76 aa9.85□□□□□ -0.83
RABGGTA-209ENST00000559551 APOMO95445 188 aa9.85□□□□□ -0.83
RABGGTA-209ENST00000559551 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
RABGGTA-209ENST00000559551 MTURNQ8N3F0 131 aa9.85□□□□□ -0.83
RABGGTA-209ENST00000559551 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
RABGGTA-209ENST00000559551 CKS1BP61024 79 aa9.84□□□□□ -0.83
RABGGTA-209ENST00000559551 GAGE6Q13070 117 aa9.84□□□□□ -0.83
RABGGTA-209ENST00000559551 AMELXQ99217 191 aa9.84□□□□□ -0.83
RABGGTA-209ENST00000559551 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.83
RABGGTA-209ENST00000559551 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 TRAV10A0A0B4J240 114 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 NHLRC4P0CG21 123 aaPredicted RBP9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 VCX2Q9H322 139 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 FOXI1Q12951 378 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 PMVKQ15126 192 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 Q8N3U1 123 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 PGPEP1Q9NXJ5 209 aa9.83□□□□□ -0.84
RABGGTA-209ENST00000559551 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
RABGGTA-209ENST00000559551 STARD9Q9P2P6 4700 aa9.81□□□□□ -0.84
RABGGTA-209ENST00000559551 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-209ENST00000559551 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
RABGGTA-209ENST00000559551 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-209ENST00000559551 PLECQ15149 4684 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-209ENST00000559551 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
RABGGTA-209ENST00000559551 H7C423 109 aa9.8□□□□□ -0.84
RABGGTA-209ENST00000559551 UBE2D1P51668 147 aa9.8□□□□□ -0.84
RABGGTA-209ENST00000559551 C11orf86A6NJI1 115 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 ZNF815PA8K554 130 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 UBE2L6O14933 153 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 ESRGQ1W209 222 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 SVIPQ8NHG7 77 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 LELP1Q5T871 98 aa9.79□□□□□ -0.84
RABGGTA-209ENST00000559551 LYSTQ99698 3801 aa9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 HERVK_113P61574 105 aa9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 TIRAPP58753 221 aa9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 SRSF9Q13242 221 aaKnown RBP eCLIP9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 PPDPFLQ8WWR9 84 aa9.78□□□□□ -0.84
RABGGTA-209ENST00000559551 TRBV20-1A0A075B6N2 111 aa9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 TSPAN13O95857 204 aa9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 PSMB2P49721 201 aa9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 CDIP1Q9H305 208 aa9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 TENM2Q9NT68 2774 aa9.77□□□□□ -0.85
RABGGTA-209ENST00000559551 GEMIN7Q9H840 131 aaKnown RBP9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 A0A1B0GUV1 79 aa9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 NFE4Q86UQ8 179 aa9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
RABGGTA-209ENST00000559551 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
RABGGTA-209ENST00000559551 TMEM262E9PQX1 116 aa9.75□□□□□ -0.85
RABGGTA-209ENST00000559551 COX6A2Q02221 97 aa9.74□□□□□ -0.85
RABGGTA-209ENST00000559551 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
RABGGTA-209ENST00000559551 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
RABGGTA-209ENST00000559551 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
RABGGTA-209ENST00000559551 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
RABGGTA-209ENST00000559551 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
RABGGTA-209ENST00000559551 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
RABGGTA-209ENST00000559551 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
RABGGTA-209ENST00000559551 M0QXV9 152 aa9.71□□□□□ -0.85
RABGGTA-209ENST00000559551 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.85
RABGGTA-209ENST00000559551 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
RABGGTA-209ENST00000559551 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
RABGGTA-209ENST00000559551 CLPSL2Q6UWE3 100 aa9.71□□□□□ -0.86
RABGGTA-209ENST00000559551 APLNQ9ULZ1 77 aa9.71□□□□□ -0.86
RABGGTA-209ENST00000559551 MT-ATP8P03928 68 aa9.7□□□□□ -0.86
RABGGTA-209ENST00000559551 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
RABGGTA-209ENST00000559551 DNAH1Q9P2D7 4330 aa9.7□□□□□ -0.86
RABGGTA-209ENST00000559551 XGP55808 180 aa9.7□□□□□ -0.86
RABGGTA-209ENST00000559551 LINC00269Q8N2A0 174 aa9.7□□□□□ -0.86
RABGGTA-209ENST00000559551 C10orf126Q8N4M7 172 aa9.7□□□□□ -0.86
RABGGTA-209ENST00000559551 IGLV5-45A0A087WSX0 123 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 TCL1BO95988 128 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 IGHV3-33P01772 117 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 IGHV3-30-3P0DP02 117 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 TMEM170BQ5T4T1 132 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
RABGGTA-209ENST00000559551 LINC00959A0A1B0GUT2 108 aa9.68□□□□□ -0.86
RABGGTA-209ENST00000559551 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
RABGGTA-209ENST00000559551 PRO1854Q9UHT4 67 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms