RNA–Protein interactions for RNA: ENST00000559457.1

AC055874.1-202, humanhuman

TSL 3

Gene AC055874.1, Length 462 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055874.1-202ENST00000559457 HBDP02042 147 aa12.15□□□□□ -0.46
AC055874.1-202ENST00000559457 MALP21145 153 aa12.15□□□□□ -0.46
AC055874.1-202ENST00000559457 S100A1P23297 94 aa12.15□□□□□ -0.46
AC055874.1-202ENST00000559457 GVQW2A0A096LPI5 108 aaPredicted RBP12.14□□□□□ -0.47
AC055874.1-202ENST00000559457 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
AC055874.1-202ENST00000559457 SLPIP03973 132 aa12.14□□□□□ -0.47
AC055874.1-202ENST00000559457 COX6A2Q02221 97 aa12.14□□□□□ -0.47
AC055874.1-202ENST00000559457 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
AC055874.1-202ENST00000559457 LINC00526Q96FQ7 95 aa12.14□□□□□ -0.47
AC055874.1-202ENST00000559457 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.12□□□□□ -0.47
AC055874.1-202ENST00000559457 PDZD11Q5EBL8 140 aa12.12□□□□□ -0.47
AC055874.1-202ENST00000559457 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
AC055874.1-202ENST00000559457 LINC00310P59036 64 aa12.1□□□□□ -0.47
AC055874.1-202ENST00000559457 CST9LQ9H4G1 147 aa12.1□□□□□ -0.47
AC055874.1-202ENST00000559457 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 A0A0J9YXV3 536 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 HSBP1O75506 76 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 SERF1AO75920 110 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 APOMO95445 188 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 C9orf163Q8N9P6 203 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
AC055874.1-202ENST00000559457 A0A087WZ39 114 aa12.08□□□□□ -0.48
AC055874.1-202ENST00000559457 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
AC055874.1-202ENST00000559457 CDK2AP2O75956 126 aa12.08□□□□□ -0.48
AC055874.1-202ENST00000559457 NDUFA6P56556 154 aa12.08□□□□□ -0.48
AC055874.1-202ENST00000559457 PMVKQ15126 192 aa12.08□□□□□ -0.48
AC055874.1-202ENST00000559457 FAM19A3Q7Z5A8 133 aa12.08□□□□□ -0.48
AC055874.1-202ENST00000559457 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 NUPR1O60356 82 aa12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 ATP5LO75964 103 aa12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 HAMPP81172 84 aa12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 GEMIN7Q9H840 131 aaKnown RBP12.07□□□□□ -0.48
AC055874.1-202ENST00000559457 SEC11AP67812 179 aa12.06□□□□□ -0.48
AC055874.1-202ENST00000559457 SPAG11BQ08648 103 aa12.06□□□□□ -0.48
AC055874.1-202ENST00000559457 APOBP04114 4563 aaKnown RBP12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BKO60814 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BJP06899 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BOP23527 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BBP33778 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 XGP55808 180 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BDP58876 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BCP62807 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HERVK_113P63121 156 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST2H2BEQ16778 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 OR10D4PQ8NGN7 298 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BHQ93079 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BNQ99877 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 HIST1H2BMQ99879 126 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
AC055874.1-202ENST00000559457 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
AC055874.1-202ENST00000559457 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
AC055874.1-202ENST00000559457 SDIM1Q6ZPB5 146 aa12.03□□□□□ -0.48
AC055874.1-202ENST00000559457 Q6ZSA8 131 aa12.03□□□□□ -0.48
AC055874.1-202ENST00000559457 LINC00469Q8N7U9 141 aa12.03□□□□□ -0.48
AC055874.1-202ENST00000559457 IFI27L1Q96BM0 104 aa12.03□□□□□ -0.48
AC055874.1-202ENST00000559457 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
AC055874.1-202ENST00000559457 LINC01561Q8N1V8 128 aa12.02□□□□□ -0.49
AC055874.1-202ENST00000559457 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
AC055874.1-202ENST00000559457 Q6ZRU5 148 aa12.01□□□□□ -0.49
AC055874.1-202ENST00000559457 C2orf48Q96LS8 159 aa12.01□□□□□ -0.49
AC055874.1-202ENST00000559457 HSPG2P98160 4391 aa12□□□□□ -0.49
AC055874.1-202ENST00000559457 DNAH8Q96JB1 4490 aa12□□□□□ -0.49
AC055874.1-202ENST00000559457 IGLC3P0DOY3 106 aa12□□□□□ -0.49
AC055874.1-202ENST00000559457 IGLV5-45A0A087WSX0 123 aa11.99□□□□□ -0.49
AC055874.1-202ENST00000559457 KIAA0087Q14695 138 aa11.99□□□□□ -0.49
AC055874.1-202ENST00000559457 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
AC055874.1-202ENST00000559457 CHAC1Q9BUX1 264 aa11.99□□□□□ -0.49
AC055874.1-202ENST00000559457 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.99□□□□□ -0.49
AC055874.1-202ENST00000559457 RYR1P21817 5038 aa11.98□□□□□ -0.49
AC055874.1-202ENST00000559457 PANO1I0J062 215 aa11.98□□□□□ -0.49
AC055874.1-202ENST00000559457 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
AC055874.1-202ENST00000559457 FABP4P15090 132 aa11.98□□□□□ -0.49
AC055874.1-202ENST00000559457 KRTAP17-1Q9BYP8 105 aa11.98□□□□□ -0.49
AC055874.1-202ENST00000559457 TOMM7Q9P0U1 55 aa11.98□□□□□ -0.49
AC055874.1-202ENST00000559457 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
AC055874.1-202ENST00000559457 CHTOPQ9Y3Y2 248 aaKnown RBP11.97□□□□□ -0.49
AC055874.1-202ENST00000559457 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 NDUFA1O15239 70 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 SPINK8P0C7L1 97 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 C10orf25Q5T742 122 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 UNQ6190/PRO20217Q6UXQ8 127 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
AC055874.1-202ENST00000559457 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
AC055874.1-202ENST00000559457 C11orf86A6NJI1 115 aa11.95□□□□□ -0.5
AC055874.1-202ENST00000559457 H0Y8G0 127 aa11.95□□□□□ -0.5
AC055874.1-202ENST00000559457 PRSS2P07478 247 aa11.95□□□□□ -0.5
AC055874.1-202ENST00000559457 ZNF22P17026 224 aaPredicted RBP11.95□□□□□ -0.5
AC055874.1-202ENST00000559457 F8WDY8 70 aa11.94□□□□□ -0.5
AC055874.1-202ENST00000559457 H3BRM9 83 aa11.94□□□□□ -0.5
AC055874.1-202ENST00000559457 SMR3BP02814 79 aaPredicted RBP11.94□□□□□ -0.5
AC055874.1-202ENST00000559457 HSPB8Q9UJY1 196 aa11.94□□□□□ -0.5
AC055874.1-202ENST00000559457 HERC2O95714 4834 aa11.93□□□□□ -0.5
AC055874.1-202ENST00000559457 A0A096LNI7 61 aa11.93□□□□□ -0.5
AC055874.1-202ENST00000559457 IGKV2-24A0A0C4DH68 120 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms