RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NDUFA5Q16718 116 aa7.87□□□□□ -1.15
SMAD3-208ENST00000558827 KIAA1644Q3SXP7 199 aa7.87□□□□□ -1.15
SMAD3-208ENST00000558827 CAMK2N2Q96S95 79 aa7.87□□□□□ -1.15
SMAD3-208ENST00000558827 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
SMAD3-208ENST00000558827 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
SMAD3-208ENST00000558827 ORAOV1Q8WV07 137 aa7.86□□□□□ -1.15
SMAD3-208ENST00000558827 MAP1LC3AQ9H492 121 aa7.86□□□□□ -1.15
SMAD3-208ENST00000558827 SPANXA1Q9NS26 97 aa7.86□□□□□ -1.15
SMAD3-208ENST00000558827 IGLV4-3A0A075B6K6 122 aa7.84□□□□□ -1.15
SMAD3-208ENST00000558827 APOMO95445 188 aa7.84□□□□□ -1.15
SMAD3-208ENST00000558827 OXTP01178 125 aa7.84□□□□□ -1.15
SMAD3-208ENST00000558827 IFI27P40305 119 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-208ENST00000558827 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
SMAD3-208ENST00000558827 CTDSP1Q9GZU7 261 aa7.84□□□□□ -1.15
SMAD3-208ENST00000558827 CARHSP1Q9Y2V2 147 aaKnown RBP7.84□□□□□ -1.15
SMAD3-208ENST00000558827 LOC107984640A0A0U1RRK4 108 aa7.83□□□□□ -1.16
SMAD3-208ENST00000558827 A0A1W2PNN7 141 aa7.83□□□□□ -1.16
SMAD3-208ENST00000558827 PTTG1IPP53801 180 aa7.83□□□□□ -1.16
SMAD3-208ENST00000558827 MRPS36P82909 103 aaKnown RBP7.83□□□□□ -1.16
SMAD3-208ENST00000558827 C10orf25Q5T742 122 aa7.83□□□□□ -1.16
SMAD3-208ENST00000558827 Q8N8P6 123 aa7.83□□□□□ -1.16
SMAD3-208ENST00000558827 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
SMAD3-208ENST00000558827 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-208ENST00000558827 APOC3P02656 99 aa7.82□□□□□ -1.16
SMAD3-208ENST00000558827 C10orf91Q5T1B1 145 aa7.82□□□□□ -1.16
SMAD3-208ENST00000558827 C2orf66Q6UXQ4 117 aa7.82□□□□□ -1.16
SMAD3-208ENST00000558827 UNQ6190/PRO20217Q6UXQ8 127 aa7.82□□□□□ -1.16
SMAD3-208ENST00000558827 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
SMAD3-208ENST00000558827 PRR3P79522 188 aaKnown RBP7.81□□□□□ -1.16
SMAD3-208ENST00000558827 RHEBQ15382 184 aa7.81□□□□□ -1.16
SMAD3-208ENST00000558827 LINC00242Q5T6M2 205 aa7.81□□□□□ -1.16
SMAD3-208ENST00000558827 SVBPQ8N300 66 aa7.81□□□□□ -1.16
SMAD3-208ENST00000558827 TMEM141Q96I45 108 aa7.81□□□□□ -1.16
SMAD3-208ENST00000558827 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
SMAD3-208ENST00000558827 TGIF2-C20orf24A0A0A6YYL0 155 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 PRSS47A8MTI9 375 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 SNAPINO95295 136 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 C9orf116Q5BN46 136 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-208ENST00000558827 SLC7A5P1Q8MH63 180 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 LINC00474Q9P2X8 69 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 CYSLTR1Q9Y271 337 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 PYGO1Q9Y3Y4 419 aa7.8□□□□□ -1.16
SMAD3-208ENST00000558827 S100PP25815 95 aa7.79□□□□□ -1.16
SMAD3-208ENST00000558827 C2orf82Q6UX34 121 aa7.79□□□□□ -1.16
SMAD3-208ENST00000558827 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
SMAD3-208ENST00000558827 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
SMAD3-208ENST00000558827 OR10D4PQ8NGN7 298 aa7.79□□□□□ -1.16
SMAD3-208ENST00000558827 VCX2Q9H322 139 aa7.79□□□□□ -1.16
SMAD3-208ENST00000558827 RPS10P5Q9NQ39 176 aa7.79□□□□□ -1.16
SMAD3-208ENST00000558827 NDUFA1O15239 70 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 UBE2D1P51668 147 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 ODF1Q14990 250 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 LINC00173Q6ZV60 143 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
SMAD3-208ENST00000558827 A0A087WZ39 114 aa7.77□□□□□ -1.17
SMAD3-208ENST00000558827 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
SMAD3-208ENST00000558827 ORMDL2Q53FV1 153 aa7.77□□□□□ -1.17
SMAD3-208ENST00000558827 Q6ZN92 141 aa7.77□□□□□ -1.17
SMAD3-208ENST00000558827 C2orf88Q9BSF0 95 aa7.77□□□□□ -1.17
SMAD3-208ENST00000558827 TOMM7Q9P0U1 55 aa7.77□□□□□ -1.17
SMAD3-208ENST00000558827 IGIPA6NJ69 53 aa7.76□□□□□ -1.17
SMAD3-208ENST00000558827 KIAA0087Q14695 138 aa7.76□□□□□ -1.17
SMAD3-208ENST00000558827 NXT2Q9NPJ8 142 aaKnown RBP7.76□□□□□ -1.17
SMAD3-208ENST00000558827 MRPL35Q9NZE8 188 aaKnown RBP7.76□□□□□ -1.17
SMAD3-208ENST00000558827 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
SMAD3-208ENST00000558827 TRAV9-1A0A075B6T8 112 aa7.75□□□□□ -1.17
SMAD3-208ENST00000558827 RNF151Q2KHN1 245 aa7.75□□□□□ -1.17
SMAD3-208ENST00000558827 Q6ZRP5 223 aa7.75□□□□□ -1.17
SMAD3-208ENST00000558827 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
SMAD3-208ENST00000558827 AMELXQ99217 191 aa7.75□□□□□ -1.17
SMAD3-208ENST00000558827 FABP9Q0Z7S8 132 aa7.74□□□□□ -1.17
SMAD3-208ENST00000558827 SERTAD4-AS1Q5TG53 156 aa7.74□□□□□ -1.17
SMAD3-208ENST00000558827 MT-ND6P03923 174 aa7.73□□□□□ -1.17
SMAD3-208ENST00000558827 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
SMAD3-208ENST00000558827 SCGB3A1Q96QR1 104 aa7.73□□□□□ -1.17
SMAD3-208ENST00000558827 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
SMAD3-208ENST00000558827 MRPL18Q9H0U6 180 aaKnown RBP7.73□□□□□ -1.17
SMAD3-208ENST00000558827 PSORS1C2Q9UIG4 136 aa7.73□□□□□ -1.17
SMAD3-208ENST00000558827 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
SMAD3-208ENST00000558827 TNXBP22105 4242 aa7.73□□□□□ -1.17
SMAD3-208ENST00000558827 PRSS2P07478 247 aa7.72□□□□□ -1.17
SMAD3-208ENST00000558827 C1orf137Q5JT78 98 aa7.72□□□□□ -1.17
SMAD3-208ENST00000558827 LINC00469Q8N7U9 141 aa7.72□□□□□ -1.17
SMAD3-208ENST00000558827 TOMM6Q96B49 74 aa7.72□□□□□ -1.17
SMAD3-208ENST00000558827 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
SMAD3-208ENST00000558827 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
SMAD3-208ENST00000558827 SRSF9Q13242 221 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMAD3-208ENST00000558827 C6orf226Q5I0X4 101 aa7.71□□□□□ -1.18
SMAD3-208ENST00000558827 PACRGQ96M98 296 aaPredicted RBP7.71□□□□□ -1.18
SMAD3-208ENST00000558827 GEMIN7Q9H840 131 aaKnown RBP7.71□□□□□ -1.18
SMAD3-208ENST00000558827 F8WDY8 70 aa7.7□□□□□ -1.18
SMAD3-208ENST00000558827 K7EMI3 77 aa7.7□□□□□ -1.18
SMAD3-208ENST00000558827 CKS1BP61024 79 aa7.7□□□□□ -1.18
SMAD3-208ENST00000558827 COX19Q49B96 90 aa7.7□□□□□ -1.18
SMAD3-208ENST00000558827 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms