RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TIMM21Q9BVV7 248 aa9.62□□□□□ -0.87
TPM1-211ENST00000558314 SMIM2Q9BVW6 85 aa9.62□□□□□ -0.87
TPM1-211ENST00000558314 F8W036 122 aa9.61□□□□□ -0.87
TPM1-211ENST00000558314 NPYP01303 97 aa9.61□□□□□ -0.87
TPM1-211ENST00000558314 S100A8P05109 93 aa9.61□□□□□ -0.87
TPM1-211ENST00000558314 HBBP68871 147 aa9.61□□□□□ -0.87
TPM1-211ENST00000558314 PHF5AQ7RTV0 110 aaKnown RBP9.61□□□□□ -0.87
TPM1-211ENST00000558314 IFITM2Q01629 132 aa9.6□□□□□ -0.87
TPM1-211ENST00000558314 UQCC3Q6UW78 93 aa9.6□□□□□ -0.87
TPM1-211ENST00000558314 TRBV24-1A0A075B6N3 115 aa9.59□□□□□ -0.87
TPM1-211ENST00000558314 RAB5AP20339 215 aa9.59□□□□□ -0.87
TPM1-211ENST00000558314 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
TPM1-211ENST00000558314 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
TPM1-211ENST00000558314 OR10D4PQ8NGN7 298 aa9.59□□□□□ -0.87
TPM1-211ENST00000558314 SPANXA1Q9NS26 97 aa9.59□□□□□ -0.87
TPM1-211ENST00000558314 PSORS1C2Q9UIG4 136 aa9.59□□□□□ -0.87
TPM1-211ENST00000558314 NDUFA1O15239 70 aa9.58□□□□□ -0.88
TPM1-211ENST00000558314 RPL32P62910 135 aaKnown RBP9.57□□□□□ -0.88
TPM1-211ENST00000558314 GAGE2EQ4V326 116 aa9.57□□□□□ -0.88
TPM1-211ENST00000558314 GAGE2DQ9UEU5 116 aa9.57□□□□□ -0.88
TPM1-211ENST00000558314 TNXBP22105 4242 aa9.57□□□□□ -0.88
TPM1-211ENST00000558314 TGIF2-C20orf24A0A0A6YYL0 155 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
TPM1-211ENST00000558314 KRTAP10-8P60410 259 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
TPM1-211ENST00000558314 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 TMEM136Q6ZRR5 245 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
TPM1-211ENST00000558314 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 PRELID3AQ96N28 172 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
TPM1-211ENST00000558314 A0A087WZ39 114 aa9.55□□□□□ -0.88
TPM1-211ENST00000558314 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
TPM1-211ENST00000558314 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
TPM1-211ENST00000558314 PPBPP02775 128 aa9.55□□□□□ -0.88
TPM1-211ENST00000558314 RNF151Q2KHN1 245 aa9.55□□□□□ -0.88
TPM1-211ENST00000558314 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
TPM1-211ENST00000558314 MRPL35Q9NZE8 188 aaKnown RBP9.55□□□□□ -0.88
TPM1-211ENST00000558314 MRPS36P82909 103 aaKnown RBP9.54□□□□□ -0.88
TPM1-211ENST00000558314 C6orf48Q9UBA6 75 aa9.53□□□□□ -0.88
TPM1-211ENST00000558314 LRP2P98164 4655 aa9.52□□□□□ -0.89
TPM1-211ENST00000558314 COMMD7Q86VX2 200 aa9.52□□□□□ -0.89
TPM1-211ENST00000558314 IGLV4-3A0A075B6K6 122 aa9.51□□□□□ -0.89
TPM1-211ENST00000558314 UBE2BP63146 152 aa9.51□□□□□ -0.89
TPM1-211ENST00000558314 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
TPM1-211ENST00000558314 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
TPM1-211ENST00000558314 TMEM218A2RU14 115 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 F8WDY8 70 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 MT-ND4LP03901 98 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 TEX43Q6ZNM6 134 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 ATP5L2Q7Z4Y8 100 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 TMEM141Q96I45 108 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 MAP1LC3AQ9H492 121 aa9.5□□□□□ -0.89
TPM1-211ENST00000558314 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
TPM1-211ENST00000558314 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
TPM1-211ENST00000558314 ANAPC16Q96DE5 110 aa9.49□□□□□ -0.89
TPM1-211ENST00000558314 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
TPM1-211ENST00000558314 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
TPM1-211ENST00000558314 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
TPM1-211ENST00000558314 M0QXV9 152 aa9.48□□□□□ -0.89
TPM1-211ENST00000558314 Q6ZN92 141 aa9.48□□□□□ -0.89
TPM1-211ENST00000558314 PRR26Q8N8Z3 221 aa9.48□□□□□ -0.89
TPM1-211ENST00000558314 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
TPM1-211ENST00000558314 SEC11CQ9BY50 192 aa9.48□□□□□ -0.89
TPM1-211ENST00000558314 PRSS2P07478 247 aa9.47□□□□□ -0.89
TPM1-211ENST00000558314 KIAA0087Q14695 138 aa9.47□□□□□ -0.89
TPM1-211ENST00000558314 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
TPM1-211ENST00000558314 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
TPM1-211ENST00000558314 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
TPM1-211ENST00000558314 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
TPM1-211ENST00000558314 VCX2Q9H322 139 aa9.46□□□□□ -0.9
TPM1-211ENST00000558314 UBE2D1P51668 147 aa9.45□□□□□ -0.9
TPM1-211ENST00000558314 LINC00469Q8N7U9 141 aa9.45□□□□□ -0.9
TPM1-211ENST00000558314 Q8N8P6 123 aa9.45□□□□□ -0.9
TPM1-211ENST00000558314 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
TPM1-211ENST00000558314 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
TPM1-211ENST00000558314 CKS1BP61024 79 aa9.44□□□□□ -0.9
TPM1-211ENST00000558314 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
TPM1-211ENST00000558314 LAMTOR2Q9Y2Q5 125 aa9.44□□□□□ -0.9
TPM1-211ENST00000558314 RNF213Q63HN8 5207 aa9.43□□□□□ -0.9
TPM1-211ENST00000558314 H0Y9J4 135 aa9.43□□□□□ -0.9
TPM1-211ENST00000558314 ORMDL2Q53FV1 153 aa9.43□□□□□ -0.9
TPM1-211ENST00000558314 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
TPM1-211ENST00000558314 CTDSP1Q9GZU7 261 aa9.43□□□□□ -0.9
TPM1-211ENST00000558314 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
TPM1-211ENST00000558314 KRTAP7-1Q8IUC3 87 aa9.42□□□□□ -0.9
TPM1-211ENST00000558314 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
TPM1-211ENST00000558314 ADCYAP1P18509 176 aa9.41□□□□□ -0.9
TPM1-211ENST00000558314 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
TPM1-211ENST00000558314 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
TPM1-211ENST00000558314 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
TPM1-211ENST00000558314 RHEBQ15382 184 aa9.4□□□□□ -0.9
TPM1-211ENST00000558314 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
TPM1-211ENST00000558314 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
TPM1-211ENST00000558314 XAGE1AQ9HD64 81 aa9.4□□□□□ -0.9
TPM1-211ENST00000558314 S100PP25815 95 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms