RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 DEFB135Q30KP9 77 aa10.77□□□□□ -0.69
NEK9-209ENST00000556170 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
NEK9-209ENST00000556170 CARD19Q96LW7 228 aa10.77□□□□□ -0.69
NEK9-209ENST00000556170 IGLV10-54A0A075B6I4 117 aa10.76□□□□□ -0.69
NEK9-209ENST00000556170 IGHV3-30P01768 117 aa10.76□□□□□ -0.69
NEK9-209ENST00000556170 IGHV3-30-5P0DP03 117 aa10.76□□□□□ -0.69
NEK9-209ENST00000556170 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
NEK9-209ENST00000556170 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
NEK9-209ENST00000556170 UBR5O95071 2799 aaPredicted RBP10.75□□□□□ -0.69
NEK9-209ENST00000556170 MXRA5Q9NR99 2828 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 TEX49A0A1B0GTD5 131 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 TRACP01848 142 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
NEK9-209ENST00000556170 DAZ2Q13117 558 aaKnown RBP10.75□□□□□ -0.69
NEK9-209ENST00000556170 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
NEK9-209ENST00000556170 CLEC2BQ92478 149 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 CDIP1Q9H305 208 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
NEK9-209ENST00000556170 CRPP02741 224 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 LINC01620Q4KN68 170 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
NEK9-209ENST00000556170 SETXQ7Z333 2677 aaKnown RBP10.74□□□□□ -0.69
NEK9-209ENST00000556170 PPDPFQ9H3Y8 114 aa10.74□□□□□ -0.69
NEK9-209ENST00000556170 INAFM1C9JVW0 142 aa10.74□□□□□ -0.69
NEK9-209ENST00000556170 A0A096LNT2 108 aa10.74□□□□□ -0.69
NEK9-209ENST00000556170 DAD1P61803 113 aa10.74□□□□□ -0.69
NEK9-209ENST00000556170 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
NEK9-209ENST00000556170 TINCRA0A1B0GVN0 87 aa10.72□□□□□ -0.69
NEK9-209ENST00000556170 ANGP03950 147 aaKnown RBP10.72□□□□□ -0.69
NEK9-209ENST00000556170 SS18Q15532 418 aa10.71□□□□□ -0.69
NEK9-209ENST00000556170 PYGO1Q9Y3Y4 419 aa10.71□□□□□ -0.69
NEK9-209ENST00000556170 POM121L12Q8N7R1 296 aa10.71□□□□□ -0.7
NEK9-209ENST00000556170 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.7
NEK9-209ENST00000556170 APCP25054 2843 aa10.7□□□□□ -0.7
NEK9-209ENST00000556170 TRBV10-1A0A0K0K1A3 114 aa10.7□□□□□ -0.7
NEK9-209ENST00000556170 IGHV3-33P01772 117 aa10.7□□□□□ -0.7
NEK9-209ENST00000556170 ICOSQ9Y6W8 199 aa10.7□□□□□ -0.7
NEK9-209ENST00000556170 BSNQ9UPA5 3926 aa10.7□□□□□ -0.7
NEK9-209ENST00000556170 UBE2D1P51668 147 aa10.69□□□□□ -0.7
NEK9-209ENST00000556170 MRPS36P82909 103 aaKnown RBP10.69□□□□□ -0.7
NEK9-209ENST00000556170 PIK3CD-AS1Q5SR53 167 aa10.68□□□□□ -0.7
NEK9-209ENST00000556170 COX6A2Q02221 97 aa10.68□□□□□ -0.7
NEK9-209ENST00000556170 MIAQ16674 131 aa10.68□□□□□ -0.7
NEK9-209ENST00000556170 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
NEK9-209ENST00000556170 FSHBP01225 129 aa10.68□□□□□ -0.7
NEK9-209ENST00000556170 LY6G6DO95868 133 aa10.67□□□□□ -0.7
NEK9-209ENST00000556170 C11orf72Q8NBR9 251 aa10.67□□□□□ -0.7
NEK9-209ENST00000556170 MAST4O15021 2626 aa10.67□□□□□ -0.7
NEK9-209ENST00000556170 TRIAP1O43715 76 aa10.67□□□□□ -0.7
NEK9-209ENST00000556170 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
NEK9-209ENST00000556170 LOC107984640A0A0U1RRK4 108 aa10.66□□□□□ -0.7
NEK9-209ENST00000556170 FAM222AQ5U5X8 452 aa10.66□□□□□ -0.7
NEK9-209ENST00000556170 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
NEK9-209ENST00000556170 HILS1P60008 231 aa10.65□□□□□ -0.7
NEK9-209ENST00000556170 Q8N2B8 174 aa10.65□□□□□ -0.7
NEK9-209ENST00000556170 COX7B2Q8TF08 81 aa10.65□□□□□ -0.71
NEK9-209ENST00000556170 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.71
NEK9-209ENST00000556170 TRBV10-2A0A0K0K1G8 114 aa10.64□□□□□ -0.71
NEK9-209ENST00000556170 AMELXQ99217 191 aa10.64□□□□□ -0.71
NEK9-209ENST00000556170 SMIM9A6NGZ8 99 aa10.64□□□□□ -0.71
NEK9-209ENST00000556170 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
NEK9-209ENST00000556170 A0A1B0GX51 115 aa10.63□□□□□ -0.71
NEK9-209ENST00000556170 IGLV1-51P01701 117 aa10.63□□□□□ -0.71
NEK9-209ENST00000556170 LINC00308Q8TCZ7 52 aa10.62□□□□□ -0.71
NEK9-209ENST00000556170 APOC4P55056 127 aa10.62□□□□□ -0.71
NEK9-209ENST00000556170 UBE2D3P61077 147 aa10.62□□□□□ -0.71
NEK9-209ENST00000556170 UBE2D2P62837 147 aa10.62□□□□□ -0.71
NEK9-209ENST00000556170 C9orf66Q5T8R8 295 aa10.62□□□□□ -0.71
NEK9-209ENST00000556170 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
NEK9-209ENST00000556170 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
NEK9-209ENST00000556170 hADV29S1A0JD25 119 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 PRO0255Q9UI72 69 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 MGAM2Q2M2H8 2515 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 UQCRQO14949 82 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 TIRAPP58753 221 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
NEK9-209ENST00000556170 IGKV3D-7A0A0C4DH55 119 aa10.6□□□□□ -0.71
NEK9-209ENST00000556170 SMCPP49901 116 aaPredicted RBP10.6□□□□□ -0.71
NEK9-209ENST00000556170 Q9HAA7 133 aa10.6□□□□□ -0.71
NEK9-209ENST00000556170 CSDC2Q9Y534 153 aaKnown RBP10.6□□□□□ -0.71
NEK9-209ENST00000556170 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
NEK9-209ENST00000556170 PKIGQ9Y2B9 76 aa10.6□□□□□ -0.71
NEK9-209ENST00000556170 IGLV4-60A0A075B6I1 120 aa10.59□□□□□ -0.71
NEK9-209ENST00000556170 TRBV6-4A0A1B0GX49 114 aa10.59□□□□□ -0.71
NEK9-209ENST00000556170 PRO0461Q9UI25 63 aa10.59□□□□□ -0.71
NEK9-209ENST00000556170 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
NEK9-209ENST00000556170 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
NEK9-209ENST00000556170 NDUFA1O15239 70 aa10.59□□□□□ -0.71
NEK9-209ENST00000556170 FAM19A5Q7Z5A7 132 aaPredicted RBP10.59□□□□□ -0.71
NEK9-209ENST00000556170 BAALC-AS2P0C853 105 aa10.58□□□□□ -0.72
NEK9-209ENST00000556170 ATP5G1P05496 136 aa10.57□□□□□ -0.72
NEK9-209ENST00000556170 TRAV13-2A0A0B4J235 113 aa10.57□□□□□ -0.72
NEK9-209ENST00000556170 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
NEK9-209ENST00000556170 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
NEK9-209ENST00000556170 LINC00526Q96FQ7 95 aa10.57□□□□□ -0.72
NEK9-209ENST00000556170 KLK12Q9UKR0 248 aa10.57□□□□□ -0.72
NEK9-209ENST00000556170 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
NEK9-209ENST00000556170 ATOX1O00244 68 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms