RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 CELSR2Q9HCU4 2923 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 KNCNA6PVL3 124 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 CCL19Q99731 98 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 V9GYY9 64 aa11.22□□□□□ -0.61
SYNE3-203ENST00000554873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.22□□□□□ -0.61
SYNE3-203ENST00000554873 IGKV2-29A2NJV5 120 aaPredicted RBP11.22□□□□□ -0.61
SYNE3-203ENST00000554873 NCR3O14931 201 aa11.21□□□□□ -0.62
SYNE3-203ENST00000554873 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.62
SYNE3-203ENST00000554873 H0YGX0 51 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 CCKP06307 115 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 COX6A2Q02221 97 aa11.2□□□□□ -0.62
SYNE3-203ENST00000554873 IGHV4-59P01825 116 aa11.19□□□□□ -0.62
SYNE3-203ENST00000554873 LINC00467Q9BRT7 94 aa11.19□□□□□ -0.62
SYNE3-203ENST00000554873 ITPR1Q14643 2758 aa11.19□□□□□ -0.62
SYNE3-203ENST00000554873 IGHV3-73A0A0B4J1V6 119 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 PROK1P58294 105 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
SYNE3-203ENST00000554873 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 HTN1P15515 57 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 BCE1O60756 84 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
SYNE3-203ENST00000554873 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
SYNE3-203ENST00000554873 LECT2O14960 151 aa11.16□□□□□ -0.62
SYNE3-203ENST00000554873 PRM2P04554 102 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 KLKP1Q107X0 134 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 Q9UF83 564 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 B4DSR2 109 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 MIR7-3HGQ8N6C7 128 aa11.15□□□□□ -0.62
SYNE3-203ENST00000554873 IGKV2-28A0A075B6P5 120 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 IGKV2D-28P01615 120 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 IGHV3OR16-12A0A075B7B8 117 aa11.14□□□□□ -0.63
SYNE3-203ENST00000554873 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
SYNE3-203ENST00000554873 Q6ZSN1 163 aa11.12□□□□□ -0.63
SYNE3-203ENST00000554873 SS18Q15532 418 aa11.12□□□□□ -0.63
SYNE3-203ENST00000554873 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
SYNE3-203ENST00000554873 USP9YO00507 2555 aaPredicted RBP11.11□□□□□ -0.63
SYNE3-203ENST00000554873 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
SYNE3-203ENST00000554873 JMJD7-PLA2G4BH0Y9G9 81 aa11.1□□□□□ -0.63
SYNE3-203ENST00000554873 SLPIP03973 132 aa11.1□□□□□ -0.63
SYNE3-203ENST00000554873 RPL36AP83881 106 aaKnown RBP11.1□□□□□ -0.63
SYNE3-203ENST00000554873 RPL36ALQ969Q0 106 aaKnown RBP11.1□□□□□ -0.63
SYNE3-203ENST00000554873 DEFB131AP59861 70 aa11.09□□□□□ -0.63
SYNE3-203ENST00000554873 UBL5Q9BZL1 73 aa11.09□□□□□ -0.63
SYNE3-203ENST00000554873 IGHV3-38A0A0C4DH36 116 aa11.09□□□□□ -0.63
SYNE3-203ENST00000554873 TRBV7-6A0A0J9YX20 115 aa11.08□□□□□ -0.63
SYNE3-203ENST00000554873 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.63
SYNE3-203ENST00000554873 ZANQ9Y493 2812 aa11.08□□□□□ -0.64
SYNE3-203ENST00000554873 FLNCQ14315 2725 aa11.08□□□□□ -0.64
SYNE3-203ENST00000554873 F8WEM9 126 aa11.08□□□□□ -0.64
SYNE3-203ENST00000554873 RBM3P98179 157 aaKnown RBP11.08□□□□□ -0.64
SYNE3-203ENST00000554873 RMI2Q96E14 147 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 CSMD2Q7Z408 3487 aa11.07□□□□□ -0.64
SYNE3-203ENST00000554873 ATP5EP56381 51 aaPredicted RBP11.06□□□□□ -0.64
SYNE3-203ENST00000554873 SNURFQ9Y675 71 aa11.06□□□□□ -0.64
SYNE3-203ENST00000554873 SLURP1P55000 103 aa11.06□□□□□ -0.64
SYNE3-203ENST00000554873 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
SYNE3-203ENST00000554873 USP9XQ93008 2570 aaPredicted RBP11.06□□□□□ -0.64
SYNE3-203ENST00000554873 NDUFC1O43677 76 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 A8MTW9 85 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 DOPEY1Q5JWR5 2465 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 LINC01356Q8N9X3 169 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 ZNF702PQ9H963 129 aa11.05□□□□□ -0.64
SYNE3-203ENST00000554873 MAPK1IP1LQ8NDC0 245 aa11.04□□□□□ -0.64
SYNE3-203ENST00000554873 UTP20O75691 2785 aaKnown RBP11.04□□□□□ -0.64
SYNE3-203ENST00000554873 PKD1L2Q7Z442 2459 aa11.04□□□□□ -0.64
SYNE3-203ENST00000554873 C11orf72Q8NBR9 251 aa11.04□□□□□ -0.64
SYNE3-203ENST00000554873 MXRA5Q9NR99 2828 aa11.03□□□□□ -0.64
SYNE3-203ENST00000554873 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
SYNE3-203ENST00000554873 CCL18P55774 89 aa11.02□□□□□ -0.65
SYNE3-203ENST00000554873 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
SYNE3-203ENST00000554873 DSCR9P59020 149 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 LINC00158P58513 81 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 POLQO75417 2590 aa11.01□□□□□ -0.65
SYNE3-203ENST00000554873 TMEM256-PLSCR3K7ERE1 68 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 Q96MF0 132 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 A0A096LNT2 108 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 Q6YL49 198 aa11□□□□□ -0.65
SYNE3-203ENST00000554873 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
SYNE3-203ENST00000554873 COX7B2Q8TF08 81 aa10.99□□□□□ -0.65
SYNE3-203ENST00000554873 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms