RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
HDAC7-229ENST00000549883 PLAC8Q9NZF1 115 aa6.17□□□□□ -1.42
HDAC7-229ENST00000549883 LAMTOR2Q9Y2Q5 125 aa6.17□□□□□ -1.42
HDAC7-229ENST00000549883 A0A0J9YXV3 536 aa6.16□□□□□ -1.42
HDAC7-229ENST00000549883 ZNF561-AS1K7EIQ3 104 aa6.16□□□□□ -1.42
HDAC7-229ENST00000549883 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
HDAC7-229ENST00000549883 C2orf66Q6UXQ4 117 aa6.16□□□□□ -1.42
HDAC7-229ENST00000549883 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
HDAC7-229ENST00000549883 SPAG11BQ08648 103 aa6.15□□□□□ -1.42
HDAC7-229ENST00000549883 LINC00242Q5T6M2 205 aa6.15□□□□□ -1.42
HDAC7-229ENST00000549883 STPG4Q8N801 248 aa6.15□□□□□ -1.42
HDAC7-229ENST00000549883 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.42
HDAC7-229ENST00000549883 TRAV9-1A0A075B6T8 112 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 ORAOV1Q8WV07 137 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 CAMK2N2Q96S95 79 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 RPS10P5Q9NQ39 176 aa6.14□□□□□ -1.43
HDAC7-229ENST00000549883 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
HDAC7-229ENST00000549883 TGIF2-C20orf24A0A0A6YYL0 155 aa6.13□□□□□ -1.43
HDAC7-229ENST00000549883 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
HDAC7-229ENST00000549883 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.13□□□□□ -1.43
HDAC7-229ENST00000549883 UBE2D1P51668 147 aa6.13□□□□□ -1.43
HDAC7-229ENST00000549883 GAGE2BQ13066 116 aa6.13□□□□□ -1.43
HDAC7-229ENST00000549883 AMELXQ99217 191 aa6.13□□□□□ -1.43
HDAC7-229ENST00000549883 ALKBH7Q9BT30 221 aaPredicted RBP6.13□□□□□ -1.43
HDAC7-229ENST00000549883 GNB1LQ9BYB4 327 aa6.13□□□□□ -1.43
HDAC7-229ENST00000549883 NXT2Q9NPJ8 142 aaKnown RBP6.13□□□□□ -1.43
HDAC7-229ENST00000549883 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
HDAC7-229ENST00000549883 A0A1W2PNN7 141 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 J3QL48 77 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 S100PP25815 95 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 KIAA0087Q14695 138 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 ORMDL2Q53FV1 153 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 UNQ6190/PRO20217Q6UXQ8 127 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
HDAC7-229ENST00000549883 HERC1Q15751 4861 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 A0A087WZ39 114 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 APOMO95445 188 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 APOC3P02656 99 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 RHEBQ15382 184 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 TEX43Q6ZNM6 134 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 OR10D4PQ8NGN7 298 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 TOMM6Q96B49 74 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
HDAC7-229ENST00000549883 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
HDAC7-229ENST00000549883 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
HDAC7-229ENST00000549883 RPL18AQ02543 176 aaKnown RBP6.1□□□□□ -1.43
HDAC7-229ENST00000549883 FABP9Q0Z7S8 132 aa6.1□□□□□ -1.43
HDAC7-229ENST00000549883 VCX2Q9H322 139 aa6.1□□□□□ -1.43
HDAC7-229ENST00000549883 FAM168BA1KXE4 195 aa6.09□□□□□ -1.43
HDAC7-229ENST00000549883 LINC01546A6NGU7 62 aa6.09□□□□□ -1.43
HDAC7-229ENST00000549883 K7EMI3 77 aa6.09□□□□□ -1.43
HDAC7-229ENST00000549883 PRR3P79522 188 aaKnown RBP6.09□□□□□ -1.43
HDAC7-229ENST00000549883 URB1-AS1Q96HZ7 61 aa6.09□□□□□ -1.43
HDAC7-229ENST00000549883 C2orf88Q9BSF0 95 aa6.09□□□□□ -1.43
HDAC7-229ENST00000549883 RNF151Q2KHN1 245 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 C9orf116Q5BN46 136 aaPredicted RBP6.08□□□□□ -1.44
HDAC7-229ENST00000549883 Q6ZN92 141 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 Q6ZRP5 223 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 C7orf33Q8WU49 177 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 MRPL35Q9NZE8 188 aaKnown RBP6.08□□□□□ -1.44
HDAC7-229ENST00000549883 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
HDAC7-229ENST00000549883 A0A096LNJ9 63 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 NDUFA1O15239 70 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 MT-ND6P03923 174 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 PHF5AQ7RTV0 110 aaKnown RBP6.07□□□□□ -1.44
HDAC7-229ENST00000549883 ERASQ7Z444 233 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 FAM19A3Q7Z5A8 133 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 YPEL4Q96NS1 127 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 TIMM17AQ99595 171 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 LINC00474Q9P2X8 69 aa6.07□□□□□ -1.44
HDAC7-229ENST00000549883 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 OXTP01178 125 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 NPSP0C0P6 89 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 PMCHL1Q16048 86 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 COX19Q49B96 90 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 C18orf32Q8TCD1 76 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 TOMM7Q9P0U1 55 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 TRAPPC1Q9Y5R8 145 aa6.06□□□□□ -1.44
HDAC7-229ENST00000549883 SNAPINO95295 136 aa6.05□□□□□ -1.44
HDAC7-229ENST00000549883 CST9LQ9H4G1 147 aa6.05□□□□□ -1.44
HDAC7-229ENST00000549883 PKIGQ9Y2B9 76 aa6.05□□□□□ -1.44
HDAC7-229ENST00000549883 F8WDY8 70 aa6.04□□□□□ -1.44
HDAC7-229ENST00000549883 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
HDAC7-229ENST00000549883 ODF1Q14990 250 aa6.04□□□□□ -1.44
HDAC7-229ENST00000549883 C9orf129Q5T035 196 aaKnown RBP6.04□□□□□ -1.44
HDAC7-229ENST00000549883 SLC7A5P1Q8MH63 180 aa6.04□□□□□ -1.44
HDAC7-229ENST00000549883 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 1521.4 ms