RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
GCN1-202ENST00000547263 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
GCN1-202ENST00000547263 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
GCN1-202ENST00000547263 SMR3BP02814 79 aaPredicted RBP6.97□□□□□ -1.29
GCN1-202ENST00000547263 UBE2D1P51668 147 aa6.97□□□□□ -1.29
GCN1-202ENST00000547263 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
GCN1-202ENST00000547263 URB1-AS1Q96HZ7 61 aa6.97□□□□□ -1.29
GCN1-202ENST00000547263 A0A087WZ39 114 aa6.96□□□□□ -1.3
GCN1-202ENST00000547263 A0A096LNJ9 63 aa6.96□□□□□ -1.3
GCN1-202ENST00000547263 IFITM10A6NMD0 228 aa6.96□□□□□ -1.3
GCN1-202ENST00000547263 C18orf32Q8TCD1 76 aa6.96□□□□□ -1.3
GCN1-202ENST00000547263 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
GCN1-202ENST00000547263 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
GCN1-202ENST00000547263 F8WDY8 70 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 COX6A2Q02221 97 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 FABP9Q0Z7S8 132 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 ERASQ7Z444 233 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 SLC7A5P1Q8MH63 180 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 OR10D4PQ8NGN7 298 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 TRAPPC1Q9Y5R8 145 aa6.95□□□□□ -1.3
GCN1-202ENST00000547263 IGLV4-69A0A075B6H9 119 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 FAM229AH3BQW9 127 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 APOMO95445 188 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 LINC00528Q8N1L1 170 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
GCN1-202ENST00000547263 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 ZNF561-AS1K7EIQ3 104 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 MALP21145 153 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 SYCNQ0VAF6 134 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 RNF151Q2KHN1 245 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 PAPPA-AS1Q5QFB9 102 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 Q6ZN92 141 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 Q6ZRU5 148 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 VCX2Q9H322 139 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 SMCO4Q9NRQ5 59 aa6.93□□□□□ -1.3
GCN1-202ENST00000547263 A0A087WYN8 130 aa6.92□□□□□ -1.3
GCN1-202ENST00000547263 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
GCN1-202ENST00000547263 C2orf88Q9BSF0 95 aa6.92□□□□□ -1.3
GCN1-202ENST00000547263 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
GCN1-202ENST00000547263 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
GCN1-202ENST00000547263 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
GCN1-202ENST00000547263 A0A096LNI7 61 aa6.91□□□□□ -1.3
GCN1-202ENST00000547263 LINC00614P0C842 121 aa6.91□□□□□ -1.3
GCN1-202ENST00000547263 SPAG11BQ08648 103 aa6.91□□□□□ -1.3
GCN1-202ENST00000547263 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
GCN1-202ENST00000547263 FAT1Q14517 4588 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
GCN1-202ENST00000547263 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
GCN1-202ENST00000547263 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 HERVK_113P63121 156 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 SEC11AP67812 179 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 FA2HQ7L5A8 372 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 ORAOV1Q8WV07 137 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
GCN1-202ENST00000547263 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.31
GCN1-202ENST00000547263 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
GCN1-202ENST00000547263 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
GCN1-202ENST00000547263 CAMK2N2Q96S95 79 aa6.89□□□□□ -1.31
GCN1-202ENST00000547263 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
GCN1-202ENST00000547263 LINC00474Q9P2X8 69 aa6.89□□□□□ -1.31
GCN1-202ENST00000547263 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 COLCA2A8K830 154 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 PTTG1IPP53801 180 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 PMVKQ15126 192 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 C10orf25Q5T742 122 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
GCN1-202ENST00000547263 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
GCN1-202ENST00000547263 NDUFA1O15239 70 aa6.87□□□□□ -1.31
GCN1-202ENST00000547263 HBDP02042 147 aa6.87□□□□□ -1.31
GCN1-202ENST00000547263 RAB5BP61020 215 aa6.87□□□□□ -1.31
GCN1-202ENST00000547263 Q8IZM0 81 aa6.87□□□□□ -1.31
GCN1-202ENST00000547263 CHCHD1Q96BP2 118 aaKnown RBP6.87□□□□□ -1.31
GCN1-202ENST00000547263 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
GCN1-202ENST00000547263 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
GCN1-202ENST00000547263 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
GCN1-202ENST00000547263 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
GCN1-202ENST00000547263 IGKV2-24A0A0C4DH68 120 aa6.85□□□□□ -1.31
GCN1-202ENST00000547263 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
GCN1-202ENST00000547263 LINC00310P59036 64 aa6.85□□□□□ -1.31
GCN1-202ENST00000547263 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
GCN1-202ENST00000547263 STPG4Q8N801 248 aa6.85□□□□□ -1.31
GCN1-202ENST00000547263 FLG2Q5D862 2391 aaPredicted RBP6.84□□□□□ -1.31
GCN1-202ENST00000547263 ATP5LO75964 103 aa6.84□□□□□ -1.31
GCN1-202ENST00000547263 TRGC2P03986 189 aa6.84□□□□□ -1.31
GCN1-202ENST00000547263 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
GCN1-202ENST00000547263 ODF1Q14990 250 aa6.84□□□□□ -1.31
GCN1-202ENST00000547263 Q6ZRP5 223 aa6.84□□□□□ -1.31
GCN1-202ENST00000547263 GEMIN7Q9H840 131 aaKnown RBP6.84□□□□□ -1.31
GCN1-202ENST00000547263 IGLV5-39A0A0G2JS06 123 aa6.83□□□□□ -1.32
GCN1-202ENST00000547263 A0A1W2PNN7 141 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms