RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 COMMD7Q86VX2 200 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 KRTAP11-1Q8IUC1 163 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 NAT8Q9UHE5 227 aa11.43□□□□□ -0.58
CHERP-204ENST00000546538 IGHV3OR16-9A0A0B4J2B5 98 aa11.42□□□□□ -0.58
CHERP-204ENST00000546538 A0A1B0GXF2 115 aa11.42□□□□□ -0.58
CHERP-204ENST00000546538 NPYP01303 97 aa11.42□□□□□ -0.58
CHERP-204ENST00000546538 CKS2P33552 79 aa11.42□□□□□ -0.58
CHERP-204ENST00000546538 C10orf25Q5T742 122 aa11.42□□□□□ -0.58
CHERP-204ENST00000546538 SMIM2Q9BVW6 85 aa11.42□□□□□ -0.58
CHERP-204ENST00000546538 D6R8Y8 96 aa11.41□□□□□ -0.58
CHERP-204ENST00000546538 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
CHERP-204ENST00000546538 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
CHERP-204ENST00000546538 MRPL54Q6P161 138 aaKnown RBP11.4□□□□□ -0.58
CHERP-204ENST00000546538 FAM168BA1KXE4 195 aa11.39□□□□□ -0.59
CHERP-204ENST00000546538 TCAPO15273 167 aa11.39□□□□□ -0.59
CHERP-204ENST00000546538 RNF151Q2KHN1 245 aa11.39□□□□□ -0.59
CHERP-204ENST00000546538 KRTAP7-1Q8IUC3 87 aa11.39□□□□□ -0.59
CHERP-204ENST00000546538 OR10D4PQ8NGN7 298 aa11.39□□□□□ -0.59
CHERP-204ENST00000546538 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
CHERP-204ENST00000546538 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
CHERP-204ENST00000546538 TMEM18Q96B42 140 aa11.38□□□□□ -0.59
CHERP-204ENST00000546538 MRPL35Q9NZE8 188 aaKnown RBP11.38□□□□□ -0.59
CHERP-204ENST00000546538 A0A1B0GW15 77 aa11.37□□□□□ -0.59
CHERP-204ENST00000546538 UQCC3Q6UW78 93 aa11.37□□□□□ -0.59
CHERP-204ENST00000546538 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
CHERP-204ENST00000546538 HBBP68871 147 aa11.36□□□□□ -0.59
CHERP-204ENST00000546538 UNQ6190/PRO20217Q6UXQ8 127 aa11.36□□□□□ -0.59
CHERP-204ENST00000546538 SLC7A5P1Q8MH63 180 aa11.36□□□□□ -0.59
CHERP-204ENST00000546538 C6orf48Q9UBA6 75 aa11.36□□□□□ -0.59
CHERP-204ENST00000546538 MT-ND6P03923 174 aa11.35□□□□□ -0.59
CHERP-204ENST00000546538 PEA15Q15121 130 aa11.35□□□□□ -0.59
CHERP-204ENST00000546538 C1orf137Q5JT78 98 aa11.35□□□□□ -0.59
CHERP-204ENST00000546538 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
CHERP-204ENST00000546538 SMDT1Q9H4I9 107 aa11.35□□□□□ -0.59
CHERP-204ENST00000546538 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
CHERP-204ENST00000546538 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
CHERP-204ENST00000546538 NDUFA1O15239 70 aa11.32□□□□□ -0.6
CHERP-204ENST00000546538 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
CHERP-204ENST00000546538 IGLV4-3A0A075B6K6 122 aa11.31□□□□□ -0.6
CHERP-204ENST00000546538 F8W036 122 aa11.31□□□□□ -0.6
CHERP-204ENST00000546538 F8WDY8 70 aa11.31□□□□□ -0.6
CHERP-204ENST00000546538 IGLV7-43P04211 117 aa11.31□□□□□ -0.6
CHERP-204ENST00000546538 A0A087WZ39 114 aa11.3□□□□□ -0.6
CHERP-204ENST00000546538 ATP6V1G1O75348 118 aa11.3□□□□□ -0.6
CHERP-204ENST00000546538 PPBPP02775 128 aa11.3□□□□□ -0.6
CHERP-204ENST00000546538 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
CHERP-204ENST00000546538 S100A8P05109 93 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 ZC2HC1BQ5TFG8 222 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 C2orf82Q6UX34 121 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 FAM19A5Q7Z5A7 132 aaPredicted RBP11.29□□□□□ -0.6
CHERP-204ENST00000546538 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 PYGO1Q9Y3Y4 419 aa11.29□□□□□ -0.6
CHERP-204ENST00000546538 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
CHERP-204ENST00000546538 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
CHERP-204ENST00000546538 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.6
CHERP-204ENST00000546538 TMEM218A2RU14 115 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 KRTAP1-4P0C5Y4 121 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 IFI27P40305 119 aaPredicted RBP11.26□□□□□ -0.61
CHERP-204ENST00000546538 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
CHERP-204ENST00000546538 ATP5L2Q7Z4Y8 100 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 TGIF2-C20orf24A0A0A6YYL0 155 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 H0Y9J4 135 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 S100A1P23297 94 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 UBE2D1P51668 147 aa11.26□□□□□ -0.61
CHERP-204ENST00000546538 LOC389332A0A1B0GUA5 103 aa11.25□□□□□ -0.61
CHERP-204ENST00000546538 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
CHERP-204ENST00000546538 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
CHERP-204ENST00000546538 RAB5AP20339 215 aa11.24□□□□□ -0.61
CHERP-204ENST00000546538 SEC11CQ9BY50 192 aa11.23□□□□□ -0.61
CHERP-204ENST00000546538 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
CHERP-204ENST00000546538 M0QXV9 152 aa11.22□□□□□ -0.61
CHERP-204ENST00000546538 AMELXQ99217 191 aa11.22□□□□□ -0.61
CHERP-204ENST00000546538 NDUFC2-KCTD14E9PQ53 114 aa11.21□□□□□ -0.61
CHERP-204ENST00000546538 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
CHERP-204ENST00000546538 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
CHERP-204ENST00000546538 Q8N8P6 123 aa11.2□□□□□ -0.62
CHERP-204ENST00000546538 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
CHERP-204ENST00000546538 LINC01561Q8N1V8 128 aa11.19□□□□□ -0.62
CHERP-204ENST00000546538 MAP1LC3AQ9H492 121 aa11.19□□□□□ -0.62
CHERP-204ENST00000546538 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
CHERP-204ENST00000546538 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
CHERP-204ENST00000546538 ADCYAP1P18509 176 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 C10orf91Q5T1B1 145 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 MUC2Q02817 5179 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 APOC3P02656 99 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 SVBPQ8N300 66 aa11.18□□□□□ -0.62
CHERP-204ENST00000546538 UBE2BP63146 152 aa11.16□□□□□ -0.62
CHERP-204ENST00000546538 LINC00469Q8N7U9 141 aa11.16□□□□□ -0.62
CHERP-204ENST00000546538 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
CHERP-204ENST00000546538 IGLV1-50A0A075B6I6 118 aa11.15□□□□□ -0.62
CHERP-204ENST00000546538 PNRC1Q12796 327 aaPredicted RBP11.15□□□□□ -0.62
CHERP-204ENST00000546538 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
CHERP-204ENST00000546538 SNAPINO95295 136 aa11.14□□□□□ -0.63
CHERP-204ENST00000546538 Q6ZN92 141 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms