RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PTTG1IPP53801 180 aa5.87□□□□□ -1.47
YBX3-218ENST00000546298 RAB14P61106 215 aa5.87□□□□□ -1.47
YBX3-218ENST00000546298 PRR3P79522 188 aaKnown RBP5.87□□□□□ -1.47
YBX3-218ENST00000546298 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
YBX3-218ENST00000546298 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
YBX3-218ENST00000546298 TMEM136Q6ZRR5 245 aa5.87□□□□□ -1.47
YBX3-218ENST00000546298 HERC1Q15751 4861 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 MT-ND4LP03901 98 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 IFI27P40305 119 aaPredicted RBP5.86□□□□□ -1.47
YBX3-218ENST00000546298 RPL39P62891 51 aaKnown RBP5.86□□□□□ -1.47
YBX3-218ENST00000546298 SPAG11BQ08648 103 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 PNRC1Q12796 327 aaPredicted RBP5.86□□□□□ -1.47
YBX3-218ENST00000546298 RNF151Q2KHN1 245 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 Q6ZRP5 223 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 OR10D4PQ8NGN7 298 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 PRELID3AQ96N28 172 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 LAMTOR2Q9Y2Q5 125 aa5.86□□□□□ -1.47
YBX3-218ENST00000546298 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
YBX3-218ENST00000546298 IFITM10A6NMD0 228 aa5.85□□□□□ -1.47
YBX3-218ENST00000546298 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
YBX3-218ENST00000546298 SPINK6Q6UWN8 80 aa5.85□□□□□ -1.47
YBX3-218ENST00000546298 ANAPC16Q96DE5 110 aa5.85□□□□□ -1.47
YBX3-218ENST00000546298 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
YBX3-218ENST00000546298 TGIF2-C20orf24A0A0A6YYL0 155 aa5.84□□□□□ -1.47
YBX3-218ENST00000546298 REG3GQ6UW15 175 aa5.84□□□□□ -1.47
YBX3-218ENST00000546298 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
YBX3-218ENST00000546298 IMMP2LQ96T52 175 aa5.84□□□□□ -1.47
YBX3-218ENST00000546298 OPRPNQ99935 248 aaPredicted RBP5.84□□□□□ -1.47
YBX3-218ENST00000546298 MRPL35Q9NZE8 188 aaKnown RBP5.84□□□□□ -1.47
YBX3-218ENST00000546298 PYGO1Q9Y3Y4 419 aa5.84□□□□□ -1.47
YBX3-218ENST00000546298 IGHV3OR16-9A0A0B4J2B5 98 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 PRSS47A8MTI9 375 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.83□□□□□ -1.48
YBX3-218ENST00000546298 NDUFA1O15239 70 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 RPL18AQ02543 176 aaKnown RBP5.83□□□□□ -1.48
YBX3-218ENST00000546298 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 FAM104AQ969W3 186 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 MAP1LC3AQ9H492 121 aa5.83□□□□□ -1.48
YBX3-218ENST00000546298 C9orf116Q5BN46 136 aaPredicted RBP5.82□□□□□ -1.48
YBX3-218ENST00000546298 TMEM141Q96I45 108 aa5.82□□□□□ -1.48
YBX3-218ENST00000546298 A0A087WZ39 114 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 LOC389332A0A1B0GUA5 103 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 A0A1W2PNN7 141 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 K7EMI3 77 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 ATP6V1G1O75348 118 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 SRSF9Q13242 221 aaKnown RBP eCLIP5.81□□□□□ -1.48
YBX3-218ENST00000546298 ORMDL2Q53FV1 153 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 Q6ZN92 141 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 Q8N8P6 123 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 C2orf88Q9BSF0 95 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 CYSLTR1Q9Y271 337 aa5.81□□□□□ -1.48
YBX3-218ENST00000546298 IGLV4-3A0A075B6K6 122 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 A0A0J9YXV3 536 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 MT-ND6P03923 174 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 NPSP0C0P6 89 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 G0S2P27469 103 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 C2orf66Q6UXQ4 117 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 LINC01561Q8N1V8 128 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 CTDSP1Q9GZU7 261 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 VCX2Q9H322 139 aa5.8□□□□□ -1.48
YBX3-218ENST00000546298 TLX1NBP0CAT3 122 aa5.79□□□□□ -1.48
YBX3-218ENST00000546298 PAPPA-AS1Q5QFB9 102 aa5.79□□□□□ -1.48
YBX3-218ENST00000546298 UNQ6190/PRO20217Q6UXQ8 127 aa5.79□□□□□ -1.48
YBX3-218ENST00000546298 PACRGQ96M98 296 aaPredicted RBP5.79□□□□□ -1.48
YBX3-218ENST00000546298 NXT2Q9NPJ8 142 aaKnown RBP5.79□□□□□ -1.48
YBX3-218ENST00000546298 TRBV30A0A0K0K1B3 111 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 SEC11AP67812 179 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 GAGE2EQ4V326 116 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 CLLU1Q5K131 121 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 PHF5AQ7RTV0 110 aaKnown RBP5.78□□□□□ -1.48
YBX3-218ENST00000546298 C6orf48Q9UBA6 75 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 GAGE2DQ9UEU5 116 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
YBX3-218ENST00000546298 PRSS2P07478 247 aa5.77□□□□□ -1.49
YBX3-218ENST00000546298 UBE2D1P51668 147 aa5.77□□□□□ -1.49
YBX3-218ENST00000546298 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
YBX3-218ENST00000546298 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
YBX3-218ENST00000546298 UQCC3Q6UW78 93 aa5.77□□□□□ -1.49
YBX3-218ENST00000546298 AMELXQ99217 191 aa5.77□□□□□ -1.49
YBX3-218ENST00000546298 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
YBX3-218ENST00000546298 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
YBX3-218ENST00000546298 KRTAP10-8P60410 259 aa5.76□□□□□ -1.49
YBX3-218ENST00000546298 CKS1BP61024 79 aa5.76□□□□□ -1.49
YBX3-218ENST00000546298 LINC01549A6NIU2 74 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 NDUFC2-KCTD14E9PQ53 114 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 HERVK_113P63121 156 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 C6orf226Q5I0X4 101 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 FAM19A5Q7Z5A7 132 aaPredicted RBP5.75□□□□□ -1.49
YBX3-218ENST00000546298 FAM19A3Q7Z5A8 133 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 DIRC1Q969H9 104 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 TIMM17AQ99595 171 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
YBX3-218ENST00000546298 GEMIN7Q9H840 131 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms