RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 H7C423 109 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 CLEC2BQ92478 149 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 A0A0J9YWU9 116 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 H3BT86 120 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 LINC00322Q6ZN03 302 aaPredicted RBP5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 A0A1W2PPM0 123 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 LRCOL1A6NCL2 159 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 NEXN-AS1Q8NBZ9 246 aa5.09□□□□□ -1.59
SRGAP1-206ENST00000543397 ANKRD17O75179 2603 aaKnown RBP5.09□□□□□ -1.6
SRGAP1-206ENST00000543397 NDUFB1O75438 58 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 LINC00467Q9BRT7 94 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 HIGD2AQ9BW72 106 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 C16orf95Q9H693 158 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 IGLV5-45A0A087WSX0 123 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 IGLV1-51P01701 117 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 FRMD6-AS1P0C7T7 363 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 BAALC-AS2P0C853 105 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 NRACQ8N912 160 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 Q8N976 141 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 DCANP1Q8TF63 244 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 SERP1Q9Y6X1 66 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 MIAQ16674 131 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 C7orf33Q8WU49 177 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 NUPR2A6NF83 97 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 FHL3Q13643 280 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 ODF3L2Q3SX64 289 aa5.08□□□□□ -1.6
SRGAP1-206ENST00000543397 IGLV2-8P01709 118 aa5.07□□□□□ -1.6
SRGAP1-206ENST00000543397 PYGO1Q9Y3Y4 419 aa5.07□□□□□ -1.6
SRGAP1-206ENST00000543397 FAM19A3Q7Z5A8 133 aa5.07□□□□□ -1.6
SRGAP1-206ENST00000543397 M0QY20 66 aa5.07□□□□□ -1.6
SRGAP1-206ENST00000543397 SYCNQ0VAF6 134 aa5.07□□□□□ -1.6
SRGAP1-206ENST00000543397 KLLNB2CW77 178 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 H3BQ85 93 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 LELP1Q5T871 98 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 HECTD1Q9ULT8 2610 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 A0A1B0GXF2 115 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 RAI1Q7Z5J4 1906 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 LECT2O14960 151 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 CRIP2P52943 208 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 PROK1P58294 105 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 MRGPRG-AS1Q2M3A8 158 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 TTTY13Q9BZ97 58 aa5.06□□□□□ -1.6
SRGAP1-206ENST00000543397 NUPR1O60356 82 aa5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 FOXI1Q12951 378 aa5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 CDKN2A-AS1Q9UH64 79 aa5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 PLA2G2DQ9UNK4 145 aa5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 COX7BP24311 80 aa5.05□□□□□ -1.6
SRGAP1-206ENST00000543397 PRM2P04554 102 aa5.04□□□□□ -1.6
SRGAP1-206ENST00000543397 CRIP1P50238 77 aa5.04□□□□□ -1.6
SRGAP1-206ENST00000543397 TDRG1Q3Y452 100 aa5.04□□□□□ -1.6
SRGAP1-206ENST00000543397 FAM19A1Q7Z5A9 133 aa5.04□□□□□ -1.6
SRGAP1-206ENST00000543397 RBM12B-AS1Q9P1G2 102 aa5.04□□□□□ -1.6
SRGAP1-206ENST00000543397 RNASE3P12724 160 aaKnown RBP5.04□□□□□ -1.6
SRGAP1-206ENST00000543397 IGLV4-3A0A075B6K6 122 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 XAGE1AQ9HD64 81 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 U3KQK5 164 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 LOC100131303A0A0U1RQF7 123 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 ATP5EP56381 51 aaPredicted RBP5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 NREPQ16612 68 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 PRR9Q5T870 116 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 LCA10Q71F78 164 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 ADAMTS20P59510 1910 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 TRBV27A0A0K0K1C4 114 aa5.03□□□□□ -1.6
SRGAP1-206ENST00000543397 HIGD1BQ9P298 99 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 A0A096LNI7 61 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 TRBV6-5A0A0K0K1A5 114 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 IGLV2-11P01706 119 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 COX7CP15954 63 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 EML5Q05BV3 1969 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 CASC2Q6XLA1 102 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 IBA57-AS1B1ANH7 110 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 JMJD7-PLA2G4BH0Y9G9 81 aa5.02□□□□□ -1.61
SRGAP1-206ENST00000543397 LINC00526Q96FQ7 95 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 WFDC2Q14508 124 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 Q6ZTC4 211 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 C11orf21Q9P2W6 132 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 TNRC6BQ9UPQ9 1833 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 IGLV4-69A0A075B6H9 119 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 A0A0J9YXY3 114 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 NHLRC4P0CG21 123 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 ZNF22P17026 224 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 FXYD2P54710 66 aa5.01□□□□□ -1.61
SRGAP1-206ENST00000543397 KIAA0087Q14695 138 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 EXPH5Q8NEV8 1989 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 SPATA12Q7Z6I5 190 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 IGLV9-49A0A0B4J1Y8 123 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 A0A0B4J2C4 111 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 UBE2D1P51668 147 aa5□□□□□ -1.61
SRGAP1-206ENST00000543397 H0Y9J4 135 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 CHKB-CPT1BH3BT56 60 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 LINC00959A0A1B0GUT2 108 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 UBE2D3P61077 147 aa4.99□□□□□ -1.61
SRGAP1-206ENST00000543397 UBE2D2P62837 147 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms