RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 LOC389332A0A1B0GUA5 103 aa6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 C5orf52A6NGY3 159 aa6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 TSHBP01222 138 aa6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 Q8N8P6 123 aa6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 TMEM101Q96IK0 257 aa6.32□□□□□ -1.4
TNFRSF1A-214ENST00000543048 IGKV3OR2-268A0A0C4DH90 116 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 LINC01546A6NGU7 62 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 HSBP1O75506 76 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 LINC00614P0C842 121 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 ZNF25P17030 456 aaPredicted RBP6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CFAP161Q6P656 301 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 HIST3H2BBQ8N257 126 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CHAC1Q9BUX1 264 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
TNFRSF1A-214ENST00000543048 hDV102S1A0JD36 115 aa6.3□□□□□ -1.4
TNFRSF1A-214ENST00000543048 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
TNFRSF1A-214ENST00000543048 K7EMI3 77 aa6.3□□□□□ -1.4
TNFRSF1A-214ENST00000543048 S100A2P29034 98 aa6.3□□□□□ -1.4
TNFRSF1A-214ENST00000543048 OR5A1Q8NGJ0 315 aa6.3□□□□□ -1.4
TNFRSF1A-214ENST00000543048 KIR2DL4Q99706 377 aa6.3□□□□□ -1.4
TNFRSF1A-214ENST00000543048 TCAPO15273 167 aa6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 NUPR1O60356 82 aa6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 FCER1GP30273 86 aa6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PDZD11Q5EBL8 140 aa6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 MRPL52Q86TS9 123 aaKnown RBP6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CHCHD10Q8WYQ3 142 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF1A-214ENST00000543048 FLG2Q5D862 2391 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CNBPP62633 177 aaKnown RBP6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 ORMDL2Q53FV1 153 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 SCXQ7RTU7 201 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 ZNF664Q8N3J9 261 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CIRBP-AS1Q8TBR5 109 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 PACRGQ96M98 296 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
TNFRSF1A-214ENST00000543048 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 IFITM10A6NMD0 228 aa6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 HBDP02042 147 aa6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 SLPIP03973 132 aa6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 SS18Q15532 418 aa6.27□□□□□ -1.41
TNFRSF1A-214ENST00000543048 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 CCL25O15444 150 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 FABP4P15090 132 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 FOXI1Q12951 378 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 PMCHL1Q16048 86 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 FAM19A2Q8N3H0 131 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 CSDC2Q9Y534 153 aaKnown RBP6.26□□□□□ -1.41
TNFRSF1A-214ENST00000543048 A0A096LNJ9 63 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 LOC105371267A0A1B0GV96 52 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 LINC01549A6NIU2 74 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 G0S2P27469 103 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 XCL1P47992 114 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 DPH3Q96FX2 82 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 TIMM21Q9BVV7 248 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 HSPB8Q9UJY1 196 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 UBE2D4Q9Y2X8 147 aa6.25□□□□□ -1.41
TNFRSF1A-214ENST00000543048 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
TNFRSF1A-214ENST00000543048 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
TNFRSF1A-214ENST00000543048 HIGD2BQ4VC39 106 aa6.24□□□□□ -1.41
TNFRSF1A-214ENST00000543048 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
TNFRSF1A-214ENST00000543048 CYSLTR1Q9Y271 337 aa6.24□□□□□ -1.41
TNFRSF1A-214ENST00000543048 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
TNFRSF1A-214ENST00000543048 C2orf66Q6UXQ4 117 aa6.23□□□□□ -1.41
TNFRSF1A-214ENST00000543048 OR10D4PQ8NGN7 298 aa6.23□□□□□ -1.41
TNFRSF1A-214ENST00000543048 TOMM6Q96B49 74 aa6.23□□□□□ -1.41
TNFRSF1A-214ENST00000543048 PANO1I0J062 215 aa6.22□□□□□ -1.41
TNFRSF1A-214ENST00000543048 ATP5LO75964 103 aa6.22□□□□□ -1.41
TNFRSF1A-214ENST00000543048 AKR1D1P51857 326 aa6.22□□□□□ -1.41
TNFRSF1A-214ENST00000543048 RPL39P62891 51 aaKnown RBP6.22□□□□□ -1.41
TNFRSF1A-214ENST00000543048 CIRBPQ14011 172 aaKnown RBP6.22□□□□□ -1.41
TNFRSF1A-214ENST00000543048 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
TNFRSF1A-214ENST00000543048 MYCBP2O75592 4640 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 TRAV13-1A0A0B4J241 112 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 KRTDAPP60985 99 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 COX6A2Q02221 97 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 SCGB3A1Q96QR1 104 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 MAP1LC3CQ9BXW4 147 aa6.21□□□□□ -1.42
TNFRSF1A-214ENST00000543048 ZNF561-AS1K7EIQ3 104 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 COX7A2LO14548 114 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 MALP21145 153 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 MRPS36P82909 103 aaKnown RBP6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 LINC00173Q6ZV60 143 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 ERASQ7Z444 233 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
TNFRSF1A-214ENST00000543048 TMEM141Q96I45 108 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms