RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 LINC00336Q6ZUF6 198 aa13.71□□□□□ -0.22
OTUB1-211ENST00000543004 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
OTUB1-211ENST00000543004 S100A6P06703 90 aa13.7□□□□□ -0.22
OTUB1-211ENST00000543004 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
OTUB1-211ENST00000543004 FUSP35637 526 aaKnown RBP eCLIP13.69□□□□□ -0.22
OTUB1-211ENST00000543004 FAM19A3Q7Z5A8 133 aa13.69□□□□□ -0.22
OTUB1-211ENST00000543004 HSPB8Q9UJY1 196 aa13.69□□□□□ -0.22
OTUB1-211ENST00000543004 HECTD4Q9Y4D8 3996 aa13.69□□□□□ -0.22
OTUB1-211ENST00000543004 SNRPEP62304 92 aaKnown RBP13.68□□□□□ -0.22
OTUB1-211ENST00000543004 HIST3H2BBQ8N257 126 aa13.68□□□□□ -0.22
OTUB1-211ENST00000543004 IGLV4-69A0A075B6H9 119 aa13.68□□□□□ -0.22
OTUB1-211ENST00000543004 C15orf56Q8N910 161 aa13.68□□□□□ -0.22
OTUB1-211ENST00000543004 COX7A2LO14548 114 aa13.67□□□□□ -0.22
OTUB1-211ENST00000543004 TMA7Q9Y2S6 64 aaKnown RBP13.67□□□□□ -0.22
OTUB1-211ENST00000543004 TRAV12-1A0A0B4J245 112 aa13.65□□□□□ -0.22
OTUB1-211ENST00000543004 CDKN2A-AS1Q9UH64 79 aa13.65□□□□□ -0.22
OTUB1-211ENST00000543004 CHTOPQ9Y3Y2 248 aaKnown RBP13.65□□□□□ -0.22
OTUB1-211ENST00000543004 TINCRA0A1B0GVN0 87 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 A0A1B0GVY2 172 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 Q8N814 137 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 GEMIN7Q9H840 131 aaKnown RBP13.64□□□□□ -0.23
OTUB1-211ENST00000543004 MRPL35Q9NZE8 188 aaKnown RBP13.64□□□□□ -0.23
OTUB1-211ENST00000543004 C5orf52A6NGY3 159 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 MALP21145 153 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 HERVK_113P63121 156 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 ODF1Q14990 250 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 HIGD2BQ4VC39 106 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 PMCHL2Q9BQD1 86 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 CHAC1Q9BUX1 264 aa13.64□□□□□ -0.23
OTUB1-211ENST00000543004 PKHD1P08F94 4074 aa13.63□□□□□ -0.23
OTUB1-211ENST00000543004 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.63□□□□□ -0.23
OTUB1-211ENST00000543004 C11orf86A6NJI1 115 aa13.63□□□□□ -0.23
OTUB1-211ENST00000543004 IGLC3P0DOY3 106 aa13.63□□□□□ -0.23
OTUB1-211ENST00000543004 KRTAP10-2P60368 255 aa13.63□□□□□ -0.23
OTUB1-211ENST00000543004 LINC00526Q96FQ7 95 aa13.63□□□□□ -0.23
OTUB1-211ENST00000543004 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
OTUB1-211ENST00000543004 EPPK1P58107 5090 aaKnown RBP13.62□□□□□ -0.23
OTUB1-211ENST00000543004 DNAH5Q8TE73 4624 aa13.62□□□□□ -0.23
OTUB1-211ENST00000543004 A0A087WZ39 114 aa13.62□□□□□ -0.23
OTUB1-211ENST00000543004 SEC11AP67812 179 aa13.62□□□□□ -0.23
OTUB1-211ENST00000543004 LINC00469Q8N7U9 141 aa13.62□□□□□ -0.23
OTUB1-211ENST00000543004 HIST1H2BLQ99880 126 aa13.62□□□□□ -0.23
OTUB1-211ENST00000543004 PACRGQ96M98 296 aaPredicted RBP13.61□□□□□ -0.23
OTUB1-211ENST00000543004 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
OTUB1-211ENST00000543004 F8VRH5 84 aa13.61□□□□□ -0.23
OTUB1-211ENST00000543004 SYS1-DBNDD2H3BUS1 97 aa13.61□□□□□ -0.23
OTUB1-211ENST00000543004 C3orf79P0CE67 100 aa13.61□□□□□ -0.23
OTUB1-211ENST00000543004 S100A2P29034 98 aa13.61□□□□□ -0.23
OTUB1-211ENST00000543004 IGLV5-45A0A087WSX0 123 aa13.6□□□□□ -0.23
OTUB1-211ENST00000543004 IGHV1-58A0A0C4DH39 117 aa13.6□□□□□ -0.23
OTUB1-211ENST00000543004 EREGO14944 169 aa13.59□□□□□ -0.23
OTUB1-211ENST00000543004 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
OTUB1-211ENST00000543004 KRTDAPP60985 99 aa13.59□□□□□ -0.23
OTUB1-211ENST00000543004 CFAP161Q6P656 301 aa13.58□□□□□ -0.24
OTUB1-211ENST00000543004 NTN5Q8WTR8 489 aaPredicted RBP13.58□□□□□ -0.24
OTUB1-211ENST00000543004 IGHV3-64A0A075B6Q5 118 aa13.57□□□□□ -0.24
OTUB1-211ENST00000543004 GVQW2A0A096LPI5 108 aaPredicted RBP13.57□□□□□ -0.24
OTUB1-211ENST00000543004 SLPIP03973 132 aa13.57□□□□□ -0.24
OTUB1-211ENST00000543004 SPINK8P0C7L1 97 aa13.57□□□□□ -0.24
OTUB1-211ENST00000543004 ORAOV1Q8WV07 137 aa13.57□□□□□ -0.24
OTUB1-211ENST00000543004 C14orf177Q52M58 125 aa13.56□□□□□ -0.24
OTUB1-211ENST00000543004 TMEM170BQ5T4T1 132 aa13.56□□□□□ -0.24
OTUB1-211ENST00000543004 SMIM1B2RUZ4 78 aa13.55□□□□□ -0.24
OTUB1-211ENST00000543004 APOMO95445 188 aa13.55□□□□□ -0.24
OTUB1-211ENST00000543004 SPAG11BQ08648 103 aa13.54□□□□□ -0.24
OTUB1-211ENST00000543004 LINC01620Q4KN68 170 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 PET117Q6UWS5 81 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 LINC01561Q8N1V8 128 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 KIAA0087Q14695 138 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 TOMM7Q9P0U1 55 aa13.53□□□□□ -0.24
OTUB1-211ENST00000543004 OR10D4PQ8NGN7 298 aa13.52□□□□□ -0.25
OTUB1-211ENST00000543004 IGLV5-52A0A0A0MRZ9 124 aa13.51□□□□□ -0.25
OTUB1-211ENST00000543004 H3BRM9 83 aa13.51□□□□□ -0.25
OTUB1-211ENST00000543004 DPM2O94777 84 aa13.51□□□□□ -0.25
OTUB1-211ENST00000543004 IGKCP01834 107 aa13.5□□□□□ -0.25
OTUB1-211ENST00000543004 PLNP26678 52 aa13.5□□□□□ -0.25
OTUB1-211ENST00000543004 DYNC1H1Q14204 4646 aaKnown RBP13.49□□□□□ -0.25
OTUB1-211ENST00000543004 TMEM223A0PJW6 202 aa13.49□□□□□ -0.25
OTUB1-211ENST00000543004 PGPEP1Q9NXJ5 209 aa13.49□□□□□ -0.25
OTUB1-211ENST00000543004 CNBPP62633 177 aaKnown RBP13.48□□□□□ -0.25
OTUB1-211ENST00000543004 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
OTUB1-211ENST00000543004 IGLV5-39A0A0G2JS06 123 aa13.47□□□□□ -0.25
OTUB1-211ENST00000543004 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
OTUB1-211ENST00000543004 Q6ZRU5 148 aa13.47□□□□□ -0.25
OTUB1-211ENST00000543004 CAMK2N2Q96S95 79 aa13.46□□□□□ -0.25
OTUB1-211ENST00000543004 UNQ6190/PRO20217Q6UXQ8 127 aa13.46□□□□□ -0.26
OTUB1-211ENST00000543004 Q8IZM0 81 aa13.46□□□□□ -0.26
OTUB1-211ENST00000543004 COX7B2Q8TF08 81 aa13.46□□□□□ -0.26
OTUB1-211ENST00000543004 C2orf48Q96LS8 159 aa13.46□□□□□ -0.26
OTUB1-211ENST00000543004 LRP1BQ9NZR2 4599 aa13.45□□□□□ -0.26
OTUB1-211ENST00000543004 PRSS2P07478 247 aa13.45□□□□□ -0.26
OTUB1-211ENST00000543004 SYCNQ0VAF6 134 aa13.45□□□□□ -0.26
OTUB1-211ENST00000543004 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
OTUB1-211ENST00000543004 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
OTUB1-211ENST00000543004 C16orf90A8MZG2 172 aa13.44□□□□□ -0.26
OTUB1-211ENST00000543004 CDPF1Q6NVV7 123 aa13.44□□□□□ -0.26
OTUB1-211ENST00000543004 C9orf163Q8N9P6 203 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms