RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMEM262E9PQX1 116 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 M0R2N4 97 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 IGHV3-53P01767 116 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 ORM1P02763 201 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 S100A4P26447 101 aaKnown RBP3.69□□□□□ -1.82
CPSF7-220ENST00000541963 CKS1BP61024 79 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 MRPL23Q16540 153 aaKnown RBP3.69□□□□□ -1.82
CPSF7-220ENST00000541963 RNASEKQ6P5S7 137 aaKnown RBP3.69□□□□□ -1.82
CPSF7-220ENST00000541963 Q6ZQT7 251 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 FMC1Q96HJ9 113 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 ICOSQ9Y6W8 199 aa3.69□□□□□ -1.82
CPSF7-220ENST00000541963 VPS13DQ5THJ4 4388 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 TRAV4A0A0B4J268 109 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 IGHV1-24A0A0C4DH33 117 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 TRBV6-1A0A0K0K1D8 114 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 SMIM13P0DJ93 91 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 CRYBA4P53673 196 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 TTC32Q5I0X7 151 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 C1orf134Q5TEV5 83 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 SH2D6Q7Z4S9 175 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 PTH2Q96A98 100 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 LINC00588Q9Y4M8 146 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
CPSF7-220ENST00000541963 A0A096LPF7 62 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 TRAV8-6A0A0B4J262 113 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 NBDYA0A0U1RRE5 68 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 A0A1B0GXF2 115 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 K7EN84 100 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 TSPAN13O95857 204 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 GATA1P15976 413 aaPredicted RBP3.67□□□□□ -1.82
CPSF7-220ENST00000541963 ASIPP42127 132 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
CPSF7-220ENST00000541963 ESRGQ1W209 222 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 Q86TA4 180 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 GATD1Q8NB37 220 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 ZNRF2Q8NHG8 242 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 VSIG2Q96IQ7 327 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 DHRS4-AS1Q9P1J3 65 aa3.67□□□□□ -1.82
CPSF7-220ENST00000541963 DNAH6Q9C0G6 4158 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 A8MWV9 139 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
CPSF7-220ENST00000541963 H3BUT2 72 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 M0QXV9 152 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 RS1O15537 224 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 LTAP01374 205 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 LYPD5Q6UWN5 251 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 Q6ZR54 194 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 C6orf223Q8N319 242 aa3.66□□□□□ -1.82
CPSF7-220ENST00000541963 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
CPSF7-220ENST00000541963 BIRC6Q9NR09 4857 aa3.65□□□□□ -1.82
CPSF7-220ENST00000541963 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.83
CPSF7-220ENST00000541963 IGKV3D-20A0A0C4DH25 116 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 LINC01549A6NIU2 74 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 H3BMG7 143 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 SH2D1AO60880 128 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 ARMS2P0C7Q2 107 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 MGST1P10620 155 aaKnown RBP3.65□□□□□ -1.83
CPSF7-220ENST00000541963 RNASE3P12724 160 aaKnown RBP3.65□□□□□ -1.83
CPSF7-220ENST00000541963 FOXA3P55318 350 aaPredicted RBP3.65□□□□□ -1.83
CPSF7-220ENST00000541963 SMAGPQ0VAQ4 97 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 RHOHQ15669 191 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 CFAP126Q5VTH2 177 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 ZFP2Q6ZN57 461 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 C2orf91Q6ZV80 131 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 FAM19A2Q8N3H0 131 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 NUP35Q8NFH5 326 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 GTSF1Q8WW33 167 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 ZC2HC1AQ96GY0 325 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 RPP21Q9H633 154 aaKnown RBP3.65□□□□□ -1.83
CPSF7-220ENST00000541963 PHLDA3Q9Y5J5 127 aa3.65□□□□□ -1.83
CPSF7-220ENST00000541963 NACAE9PAV3 2078 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 MUC4Q99102 2169 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 TRBV20-1A0A075B6N2 111 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 HIGD1CA8MV81 97 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 F2Z2F3 143 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 RTL8CO15255 209 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 ATP5LO75964 103 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 P01737 135 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 EVI2AP22794 236 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 CRIP1P50238 77 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 Q6Q795 121 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 ATOH7Q8N100 152 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 SLC25A29Q8N8R3 303 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
CPSF7-220ENST00000541963 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 DNAH10Q8IVF4 4471 aa3.64□□□□□ -1.83
CPSF7-220ENST00000541963 TMSB15BA0A087X1C1 80 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 IGHV3-73A0A0B4J1V6 119 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 A0A1B0GUT8 65 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 E9PLD3 99 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 H3BVH4 76 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 IGLV2-8P01709 118 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 HBDP02042 147 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 FGF6P10767 208 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 C2orf66Q6UXQ4 117 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 C10orf126Q8N4M7 172 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms