RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PLEKHB2Q96CS7 222 aa16.77■□□□□ 0.27
TTC3-225ENST00000540756 ANGP03950 147 aaKnown RBP16.76■□□□□ 0.27
TTC3-225ENST00000540756 IGHV1-58A0A0C4DH39 117 aa16.75■□□□□ 0.27
TTC3-225ENST00000540756 SIVA1O15304 175 aa16.75■□□□□ 0.27
TTC3-225ENST00000540756 SEC11AP67812 179 aa16.75■□□□□ 0.27
TTC3-225ENST00000540756 CSMD3Q7Z407 3707 aa16.74■□□□□ 0.27
TTC3-225ENST00000540756 LGALS3P17931 250 aaKnown RBP16.74■□□□□ 0.27
TTC3-225ENST00000540756 LYSTQ99698 3801 aa16.73■□□□□ 0.27
TTC3-225ENST00000540756 IGHV3-30P01768 117 aa16.72■□□□□ 0.27
TTC3-225ENST00000540756 IGHV3-33P01772 117 aa16.72■□□□□ 0.27
TTC3-225ENST00000540756 IGHV3-30-5P0DP03 117 aa16.72■□□□□ 0.27
TTC3-225ENST00000540756 SMIM1B2RUZ4 78 aa16.72■□□□□ 0.27
TTC3-225ENST00000540756 H3BRM9 83 aa16.72■□□□□ 0.27
TTC3-225ENST00000540756 IGLL5B9A064 214 aa16.71■□□□□ 0.27
TTC3-225ENST00000540756 XCL1P47992 114 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 REG3AQ06141 175 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 HIGD1BQ9P298 99 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 IGHV3OR16-9A0A0B4J2B5 98 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 CCL25O15444 150 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 BVES-AS1Q5T3Y7 98 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 KLK12Q9UKR0 248 aa16.7■□□□□ 0.26
TTC3-225ENST00000540756 IGLV10-54A0A075B6I4 117 aa16.69■□□□□ 0.26
TTC3-225ENST00000540756 SCGB1D4Q6XE38 83 aa16.68■□□□□ 0.26
TTC3-225ENST00000540756 C5orf38Q86SI9 138 aa16.68■□□□□ 0.26
TTC3-225ENST00000540756 IGLV5-39A0A0G2JS06 123 aa16.67■□□□□ 0.26
TTC3-225ENST00000540756 SS18Q15532 418 aa16.67■□□□□ 0.26
TTC3-225ENST00000540756 C10orf126Q8N4M7 172 aa16.67■□□□□ 0.26
TTC3-225ENST00000540756 C15orf53Q8NAA6 179 aa16.66■□□□□ 0.26
TTC3-225ENST00000540756 DYNC2H1Q8NCM8 4307 aaKnown RBP16.66■□□□□ 0.26
TTC3-225ENST00000540756 NHLRC4P0CG21 123 aaPredicted RBP16.65■□□□□ 0.26
TTC3-225ENST00000540756 HSD52Q0P140 79 aa16.65■□□□□ 0.26
TTC3-225ENST00000540756 K7EP13 123 aa16.64■□□□□ 0.25
TTC3-225ENST00000540756 ENHOQ6UWT2 76 aa16.64■□□□□ 0.25
TTC3-225ENST00000540756 NDUFA12Q9UI09 145 aa16.64■□□□□ 0.25
TTC3-225ENST00000540756 CHCHD10Q8WYQ3 142 aaPredicted RBP16.63■□□□□ 0.25
TTC3-225ENST00000540756 PRR34Q9NV39 138 aa16.63■□□□□ 0.25
TTC3-225ENST00000540756 LINC00588Q9Y4M8 146 aa16.63■□□□□ 0.25
TTC3-225ENST00000540756 DNAH7Q8WXX0 4024 aa16.63■□□□□ 0.25
TTC3-225ENST00000540756 A0A087WZ39 114 aa16.62■□□□□ 0.25
TTC3-225ENST00000540756 ZFAND6Q6FIF0 208 aa16.62■□□□□ 0.25
TTC3-225ENST00000540756 GCSHP23434 173 aa16.61■□□□□ 0.25
TTC3-225ENST00000540756 PLECQ15149 4684 aaKnown RBP16.61■□□□□ 0.25
TTC3-225ENST00000540756 HIST1H4GQ99525 98 aa16.6■□□□□ 0.25
TTC3-225ENST00000540756 TENM2Q9NT68 2774 aa16.6■□□□□ 0.25
TTC3-225ENST00000540756 A0A0J9YXY3 114 aa16.6■□□□□ 0.25
TTC3-225ENST00000540756 UBE2WQ96B02 151 aa16.6■□□□□ 0.25
TTC3-225ENST00000540756 FXYD2P54710 66 aa16.59■□□□□ 0.25
TTC3-225ENST00000540756 FBN3Q75N90 2809 aa16.59■□□□□ 0.25
TTC3-225ENST00000540756 CD164L2Q6UWJ8 174 aa16.58■□□□□ 0.24
TTC3-225ENST00000540756 TOMM7Q9P0U1 55 aa16.58■□□□□ 0.24
TTC3-225ENST00000540756 STARD9Q9P2P6 4700 aa16.58■□□□□ 0.24
TTC3-225ENST00000540756 CEND1Q8N111 149 aa16.57■□□□□ 0.24
TTC3-225ENST00000540756 ORAOV1Q8WV07 137 aa16.57■□□□□ 0.24
TTC3-225ENST00000540756 Q9H8V8 135 aa16.57■□□□□ 0.24
TTC3-225ENST00000540756 LBHQ53QV2 105 aaPredicted RBP16.57■□□□□ 0.24
TTC3-225ENST00000540756 Q6ZVH6 145 aa16.57■□□□□ 0.24
TTC3-225ENST00000540756 ZNF625Q96I27 306 aaPredicted RBP16.57■□□□□ 0.24
TTC3-225ENST00000540756 COL5A1-AS1Q5SY13 56 aa16.56■□□□□ 0.24
TTC3-225ENST00000540756 NDUFA1O15239 70 aa16.55■□□□□ 0.24
TTC3-225ENST00000540756 FOXI1Q12951 378 aa16.55■□□□□ 0.24
TTC3-225ENST00000540756 LINC01556Q5JQF7 62 aa16.55■□□□□ 0.24
TTC3-225ENST00000540756 SRSF9Q13242 221 aaKnown RBP eCLIP16.55■□□□□ 0.24
TTC3-225ENST00000540756 COX7B2Q8TF08 81 aa16.55■□□□□ 0.24
TTC3-225ENST00000540756 GAGE12HA6NDE8 117 aa16.54■□□□□ 0.24
TTC3-225ENST00000540756 LITAFQ99732 161 aa16.54■□□□□ 0.24
TTC3-225ENST00000540756 CRPP02741 224 aa16.53■□□□□ 0.24
TTC3-225ENST00000540756 CCL18P55774 89 aa16.53■□□□□ 0.24
TTC3-225ENST00000540756 ADAMTSL4-AS1Q5T5F5 129 aa16.53■□□□□ 0.24
TTC3-225ENST00000540756 TM2D2Q9BX73 214 aa16.53■□□□□ 0.24
TTC3-225ENST00000540756 A0A1B0GV90 55 aa16.53■□□□□ 0.24
TTC3-225ENST00000540756 COX7A2LO14548 114 aa16.52■□□□□ 0.24
TTC3-225ENST00000540756 TAL2Q16559 108 aa16.52■□□□□ 0.24
TTC3-225ENST00000540756 DNAH1Q9P2D7 4330 aa16.52■□□□□ 0.23
TTC3-225ENST00000540756 DNAH10OSP0CZ25 163 aa16.51■□□□□ 0.23
TTC3-225ENST00000540756 SPANXB1Q9NS25 103 aaPredicted RBP16.5■□□□□ 0.23
TTC3-225ENST00000540756 APLNQ9ULZ1 77 aa16.5■□□□□ 0.23
TTC3-225ENST00000540756 PTTG1IPP53801 180 aa16.49■□□□□ 0.23
TTC3-225ENST00000540756 A0A0U1RRA0 63 aa16.48■□□□□ 0.23
TTC3-225ENST00000540756 DAND5Q8N907 189 aa16.48■□□□□ 0.23
TTC3-225ENST00000540756 TGP01266 2768 aa16.48■□□□□ 0.23
TTC3-225ENST00000540756 K7ERJ3 54 aa16.48■□□□□ 0.23
TTC3-225ENST00000540756 MALP21145 153 aa16.47■□□□□ 0.23
TTC3-225ENST00000540756 MIAQ16674 131 aa16.46■□□□□ 0.23
TTC3-225ENST00000540756 KRTAP26-1Q6PEX3 210 aa16.46■□□□□ 0.23
TTC3-225ENST00000540756 NHP2Q9NX24 153 aaKnown RBP16.46■□□□□ 0.23
TTC3-225ENST00000540756 TRAV8-4A0A0B4J246 113 aa16.45■□□□□ 0.22
TTC3-225ENST00000540756 TMEM238C9JI98 176 aa16.45■□□□□ 0.22
TTC3-225ENST00000540756 TAX1BP3O14907 124 aa16.45■□□□□ 0.22
TTC3-225ENST00000540756 C2orf82Q6UX34 121 aa16.45■□□□□ 0.22
TTC3-225ENST00000540756 NPC2P61916 151 aa16.45■□□□□ 0.22
TTC3-225ENST00000540756 EIF4EBP3O60516 100 aaPredicted RBP16.44■□□□□ 0.22
TTC3-225ENST00000540756 C6orf226Q5I0X4 101 aa16.44■□□□□ 0.22
TTC3-225ENST00000540756 MUSTN1Q8IVN3 82 aa16.44■□□□□ 0.22
TTC3-225ENST00000540756 LINC01561Q8N1V8 128 aa16.44■□□□□ 0.22
TTC3-225ENST00000540756 KIAA0087Q14695 138 aa16.43■□□□□ 0.22
TTC3-225ENST00000540756 UPK3BQ9BT76 320 aa16.43■□□□□ 0.22
TTC3-225ENST00000540756 Q9HAA7 133 aa16.43■□□□□ 0.22
TTC3-225ENST00000540756 A6NDN8 102 aa16.43■□□□□ 0.22
TTC3-225ENST00000540756 RAB37Q96AX2 223 aa16.43■□□□□ 0.22
TTC3-225ENST00000540756 LINC00526Q96FQ7 95 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms