RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 C9JQL5 133 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 SLPIP03973 132 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 TMEM136Q6ZRR5 245 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 STPG4Q8N801 248 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 HERC1Q15751 4861 aa6.61□□□□□ -1.35
CDCA3-208ENST00000540683 TGIF2-C20orf24A0A0A6YYL0 155 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 GAS8-AS1O95177 125 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 NPSP0C0P6 89 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
CDCA3-208ENST00000540683 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 PAPPA-AS1Q5QFB9 102 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 Q6ZN92 141 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 PRELID3AQ96N28 172 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
CDCA3-208ENST00000540683 LINC01549A6NIU2 74 aa6.59□□□□□ -1.35
CDCA3-208ENST00000540683 IFITM10A6NMD0 228 aa6.59□□□□□ -1.35
CDCA3-208ENST00000540683 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
CDCA3-208ENST00000540683 PRSS3P2Q8NHM4 247 aa6.59□□□□□ -1.35
CDCA3-208ENST00000540683 C2orf88Q9BSF0 95 aa6.59□□□□□ -1.35
CDCA3-208ENST00000540683 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.35
CDCA3-208ENST00000540683 CHTF8P0CG12 524 aa6.58□□□□□ -1.36
CDCA3-208ENST00000540683 ORMDL2Q53FV1 153 aa6.58□□□□□ -1.36
CDCA3-208ENST00000540683 UQCC3Q6UW78 93 aa6.58□□□□□ -1.36
CDCA3-208ENST00000540683 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
CDCA3-208ENST00000540683 TRAV9-1A0A075B6T8 112 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 A0A096LNI7 61 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 PANO1I0J062 215 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 NDUFA1O15239 70 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 NPYP01303 97 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 PTTG1IPP53801 180 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 SEC11AP67812 179 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 REG3GQ6UW15 175 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 Q6ZRP5 223 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 Q6ZUT4 128 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 TMEM141Q96I45 108 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 CYSLTR1Q9Y271 337 aa6.57□□□□□ -1.36
CDCA3-208ENST00000540683 IGHV3OR16-9A0A0B4J2B5 98 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 S100PP25815 95 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 RPL39P62891 51 aaKnown RBP6.55□□□□□ -1.36
CDCA3-208ENST00000540683 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
CDCA3-208ENST00000540683 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 COX19Q49B96 90 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 CLLU1Q5K131 121 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 C5orf38Q86SI9 138 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 LINC01561Q8N1V8 128 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 Q8N8P6 123 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 ORAOV1Q8WV07 137 aa6.55□□□□□ -1.36
CDCA3-208ENST00000540683 MRPL35Q9NZE8 188 aaKnown RBP6.55□□□□□ -1.36
CDCA3-208ENST00000540683 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
CDCA3-208ENST00000540683 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
CDCA3-208ENST00000540683 SPINK6Q6UWN8 80 aa6.54□□□□□ -1.36
CDCA3-208ENST00000540683 VCX2Q9H322 139 aa6.54□□□□□ -1.36
CDCA3-208ENST00000540683 A0A087WZ39 114 aa6.53□□□□□ -1.36
CDCA3-208ENST00000540683 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
CDCA3-208ENST00000540683 PRSS2P07478 247 aa6.53□□□□□ -1.36
CDCA3-208ENST00000540683 LINC00526Q96FQ7 95 aa6.53□□□□□ -1.36
CDCA3-208ENST00000540683 PACRGQ96M98 296 aaPredicted RBP6.53□□□□□ -1.36
CDCA3-208ENST00000540683 LOC389332A0A1B0GUA5 103 aa6.52□□□□□ -1.37
CDCA3-208ENST00000540683 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
CDCA3-208ENST00000540683 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
CDCA3-208ENST00000540683 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
CDCA3-208ENST00000540683 MT-ND6P03923 174 aa6.51□□□□□ -1.37
CDCA3-208ENST00000540683 HERVK_113P63121 156 aa6.51□□□□□ -1.37
CDCA3-208ENST00000540683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.5□□□□□ -1.37
CDCA3-208ENST00000540683 CKS1BP61024 79 aa6.5□□□□□ -1.37
CDCA3-208ENST00000540683 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
CDCA3-208ENST00000540683 SEC11CQ9BY50 192 aa6.5□□□□□ -1.37
CDCA3-208ENST00000540683 TMEM218A2RU14 115 aa6.49□□□□□ -1.37
CDCA3-208ENST00000540683 UBE2D1P51668 147 aa6.49□□□□□ -1.37
CDCA3-208ENST00000540683 C9orf116Q5BN46 136 aaPredicted RBP6.49□□□□□ -1.37
CDCA3-208ENST00000540683 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
CDCA3-208ENST00000540683 LINC01600Q96MT4 127 aa6.49□□□□□ -1.37
CDCA3-208ENST00000540683 GNB1LQ9BYB4 327 aa6.49□□□□□ -1.37
CDCA3-208ENST00000540683 GEMIN7Q9H840 131 aaKnown RBP6.49□□□□□ -1.37
CDCA3-208ENST00000540683 B5MCH6 92 aa6.48□□□□□ -1.37
CDCA3-208ENST00000540683 CXCL5P42830 114 aa6.48□□□□□ -1.37
CDCA3-208ENST00000540683 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
CDCA3-208ENST00000540683 C6orf226Q5I0X4 101 aa6.48□□□□□ -1.37
CDCA3-208ENST00000540683 ERASQ7Z444 233 aa6.48□□□□□ -1.37
CDCA3-208ENST00000540683 AMELXQ99217 191 aa6.48□□□□□ -1.37
CDCA3-208ENST00000540683 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
CDCA3-208ENST00000540683 NDUFC2-KCTD14E9PQ53 114 aa6.47□□□□□ -1.37
CDCA3-208ENST00000540683 RHEBQ15382 184 aa6.47□□□□□ -1.37
CDCA3-208ENST00000540683 FAM19A3Q7Z5A8 133 aa6.47□□□□□ -1.37
CDCA3-208ENST00000540683 Q8IZM0 81 aa6.47□□□□□ -1.37
CDCA3-208ENST00000540683 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
CDCA3-208ENST00000540683 SMCO4Q9NRQ5 59 aa6.47□□□□□ -1.37
CDCA3-208ENST00000540683 IGIPA6NJ69 53 aa6.46□□□□□ -1.38
CDCA3-208ENST00000540683 DIRC1Q969H9 104 aa6.46□□□□□ -1.38
CDCA3-208ENST00000540683 FAM104AQ969W3 186 aa6.46□□□□□ -1.38
CDCA3-208ENST00000540683 SCGB3A1Q96QR1 104 aa6.46□□□□□ -1.38
CDCA3-208ENST00000540683 ALKBH7Q9BT30 221 aaPredicted RBP6.46□□□□□ -1.38
CDCA3-208ENST00000540683 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
CDCA3-208ENST00000540683 NDUFA5Q16718 116 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms