RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PRSS2P07478 247 aa8.07□□□□□ -1.12
VTN-202ENST00000539746 CXCL5P42830 114 aa8.07□□□□□ -1.12
VTN-202ENST00000539746 HNRNPA3P51991 378 aaKnown RBP8.07□□□□□ -1.12
VTN-202ENST00000539746 SLC25A34Q6PIV7 304 aa8.07□□□□□ -1.12
VTN-202ENST00000539746 Q9H8V8 135 aa8.07□□□□□ -1.12
VTN-202ENST00000539746 KLK12Q9UKR0 248 aa8.07□□□□□ -1.12
VTN-202ENST00000539746 LINC00588Q9Y4M8 146 aa8.07□□□□□ -1.12
VTN-202ENST00000539746 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
VTN-202ENST00000539746 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
VTN-202ENST00000539746 IGHV1-58A0A0C4DH39 117 aa8.06□□□□□ -1.12
VTN-202ENST00000539746 LEPROTO15243 131 aa8.06□□□□□ -1.12
VTN-202ENST00000539746 CIRBPQ14011 172 aaKnown RBP8.06□□□□□ -1.12
VTN-202ENST00000539746 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
VTN-202ENST00000539746 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
VTN-202ENST00000539746 A0A087WZ39 114 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 MYMXA0A1B0GTQ4 84 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 IBA57-AS1B1ANH7 110 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 ZNF22P17026 224 aaPredicted RBP8.05□□□□□ -1.12
VTN-202ENST00000539746 HERV-K104P63124 156 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 WFDC10BQ8IUB3 73 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 UBE2WQ96B02 151 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
VTN-202ENST00000539746 SNHG12Q9BXW3 62 aa8.05□□□□□ -1.12
VTN-202ENST00000539746 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
VTN-202ENST00000539746 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
VTN-202ENST00000539746 COX8AP10176 69 aa8.04□□□□□ -1.12
VTN-202ENST00000539746 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
VTN-202ENST00000539746 CHCHD10Q8WYQ3 142 aaPredicted RBP8.04□□□□□ -1.12
VTN-202ENST00000539746 J3QQQ9 107 aa8.03□□□□□ -1.12
VTN-202ENST00000539746 XCL1P47992 114 aa8.03□□□□□ -1.12
VTN-202ENST00000539746 C14orf177Q52M58 125 aa8.03□□□□□ -1.12
VTN-202ENST00000539746 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
VTN-202ENST00000539746 COL5A1-AS1Q5SY13 56 aa8.03□□□□□ -1.12
VTN-202ENST00000539746 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
VTN-202ENST00000539746 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
VTN-202ENST00000539746 Q6ZVH6 145 aa8.02□□□□□ -1.13
VTN-202ENST00000539746 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
VTN-202ENST00000539746 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
VTN-202ENST00000539746 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
VTN-202ENST00000539746 CKS1BP61024 79 aa8.01□□□□□ -1.13
VTN-202ENST00000539746 Q8IZM0 81 aa8.01□□□□□ -1.13
VTN-202ENST00000539746 STPG4Q8N801 248 aa8.01□□□□□ -1.13
VTN-202ENST00000539746 ZNF815PA8K554 130 aa8□□□□□ -1.13
VTN-202ENST00000539746 EREGO14944 169 aa8□□□□□ -1.13
VTN-202ENST00000539746 PSCAO43653 123 aa8□□□□□ -1.13
VTN-202ENST00000539746 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
VTN-202ENST00000539746 FAM104AQ969W3 186 aa8□□□□□ -1.13
VTN-202ENST00000539746 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 IGKV2D-24A0A075B6R9 120 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 IGLV5-39A0A0G2JS06 123 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 GAGE12HA6NDE8 117 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 ZNF561-AS1K7EIQ3 104 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 MAJINQ3KP22 176 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 ZFAND6Q6FIF0 208 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 ENHOQ6UWT2 76 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 COX7B2Q8TF08 81 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 HIGD1BQ9P298 99 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 NDUFA12Q9UI09 145 aa7.99□□□□□ -1.13
VTN-202ENST00000539746 TENM3Q9P273 2699 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 TMEM238LA0A1B0GVL6 79 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 A6NJY4 79 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 SMIM1B2RUZ4 78 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 NDUFA1O15239 70 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 TIMM17BO60830 172 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 TAL2Q16559 108 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 CLPSL2Q6UWE3 100 aa7.98□□□□□ -1.13
VTN-202ENST00000539746 FBN3Q75N90 2809 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 NBDYA0A0U1RRE5 68 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 FOXI1Q12951 378 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 COX17Q14061 63 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
VTN-202ENST00000539746 IGLV10-54A0A075B6I4 117 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 A0A0J9YXY3 114 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 A0A1B0GV90 55 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 ANKRD39Q53RE8 183 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 C5orf38Q86SI9 138 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 ORAOV1Q8WV07 137 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 C2orf48Q96LS8 159 aa7.96□□□□□ -1.14
VTN-202ENST00000539746 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
VTN-202ENST00000539746 Q9HAA7 133 aa7.95□□□□□ -1.14
VTN-202ENST00000539746 TOMM7Q9P0U1 55 aa7.95□□□□□ -1.14
VTN-202ENST00000539746 IFITM1P13164 125 aa7.94□□□□□ -1.14
VTN-202ENST00000539746 COX6A2Q02221 97 aa7.94□□□□□ -1.14
VTN-202ENST00000539746 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
VTN-202ENST00000539746 HSD52Q0P140 79 aa7.94□□□□□ -1.14
VTN-202ENST00000539746 SRSF9Q13242 221 aaKnown RBP eCLIP7.94□□□□□ -1.14
VTN-202ENST00000539746 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
VTN-202ENST00000539746 HUWE1Q7Z6Z7 4374 aaKnown RBP7.94□□□□□ -1.14
VTN-202ENST00000539746 TRBV30A0A0K0K1B3 111 aa7.93□□□□□ -1.14
VTN-202ENST00000539746 MEIG1Q5JSS6 88 aa7.93□□□□□ -1.14
VTN-202ENST00000539746 SPANXB1Q9NS25 103 aaPredicted RBP7.93□□□□□ -1.14
VTN-202ENST00000539746 COL7A1Q02388 2944 aa7.93□□□□□ -1.14
VTN-202ENST00000539746 DNAH9Q9NYC9 4486 aa7.93□□□□□ -1.14
VTN-202ENST00000539746 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms