RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CRPP02741 224 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 REG3AQ06141 175 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 CASC10Q5T4H9 136 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 LINC00269Q8N2A0 174 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 C10orf126Q8N4M7 172 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 PMCHL2Q9BQD1 86 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 Q9H8V8 135 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 KLK12Q9UKR0 248 aa7.22□□□□□ -1.25
LEMD3-202ENST00000539442 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 GHRHP01286 108 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 HERVK_113P63121 156 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 SS18Q15532 418 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 LINC00242Q5T6M2 205 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 CHAC1Q9BUX1 264 aa7.21□□□□□ -1.26
LEMD3-202ENST00000539442 STARD9Q9P2P6 4700 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 TGP01266 2768 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 TRAV9-2A0A087WT02 112 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 IGKV3OR2-268A0A0C4DH90 116 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 C11orf86A6NJI1 115 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 MIAQ16674 131 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 CLPSL2Q6UWE3 100 aa7.2□□□□□ -1.26
LEMD3-202ENST00000539442 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
LEMD3-202ENST00000539442 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
LEMD3-202ENST00000539442 IGLV5-45A0A087WSX0 123 aa7.19□□□□□ -1.26
LEMD3-202ENST00000539442 IBA57-AS1B1ANH7 110 aa7.19□□□□□ -1.26
LEMD3-202ENST00000539442 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
LEMD3-202ENST00000539442 ENHOQ6UWT2 76 aa7.19□□□□□ -1.26
LEMD3-202ENST00000539442 ATOH7Q8N100 152 aa7.19□□□□□ -1.26
LEMD3-202ENST00000539442 UBE2WQ96B02 151 aa7.19□□□□□ -1.26
LEMD3-202ENST00000539442 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
LEMD3-202ENST00000539442 HSBP1L1C9JCN9 74 aa7.18□□□□□ -1.26
LEMD3-202ENST00000539442 S100A12P80511 92 aa7.18□□□□□ -1.26
LEMD3-202ENST00000539442 TTC32Q5I0X7 151 aa7.18□□□□□ -1.26
LEMD3-202ENST00000539442 TMEM170BQ5T4T1 132 aa7.18□□□□□ -1.26
LEMD3-202ENST00000539442 LINC00469Q8N7U9 141 aa7.18□□□□□ -1.26
LEMD3-202ENST00000539442 TRAV8-3A0A0A6YYJ7 113 aa7.17□□□□□ -1.26
LEMD3-202ENST00000539442 H3BRM9 83 aa7.17□□□□□ -1.26
LEMD3-202ENST00000539442 HERVK_113P61574 105 aa7.17□□□□□ -1.26
LEMD3-202ENST00000539442 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
LEMD3-202ENST00000539442 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
LEMD3-202ENST00000539442 VAMP8Q9BV40 100 aa7.17□□□□□ -1.26
LEMD3-202ENST00000539442 IGHV3OR16-9A0A0B4J2B5 98 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 XCL1P47992 114 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 COX6A2Q02221 97 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 CDPF1Q6NVV7 123 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 LINC00518Q8N0U6 118 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 RMI2Q96E14 147 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 C12orf57Q99622 126 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 CDKN2A-AS1Q9UH64 79 aa7.16□□□□□ -1.26
LEMD3-202ENST00000539442 IGLV10-54A0A075B6I4 117 aa7.15□□□□□ -1.26
LEMD3-202ENST00000539442 A0A087WZ39 114 aa7.15□□□□□ -1.26
LEMD3-202ENST00000539442 hDV102S1A0JD36 115 aa7.15□□□□□ -1.26
LEMD3-202ENST00000539442 TMEM223A0PJW6 202 aa7.15□□□□□ -1.26
LEMD3-202ENST00000539442 STPG4Q8N801 248 aa7.15□□□□□ -1.26
LEMD3-202ENST00000539442 C1orf43Q9BWL3 253 aa7.15□□□□□ -1.26
LEMD3-202ENST00000539442 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 E9PLD3 99 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 FOXI1Q12951 378 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 MAJINQ3KP22 176 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 LINC00476Q8WZB0 136 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 PAM16Q9Y3D7 125 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 COX11Q9Y6N1 276 aa7.14□□□□□ -1.27
LEMD3-202ENST00000539442 GAGE12HA6NDE8 117 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 COX7A2LO14548 114 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 SPATA45Q537H7 98 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 KRTAP26-1Q6PEX3 210 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 Q9HAA7 133 aa7.13□□□□□ -1.27
LEMD3-202ENST00000539442 VPS13DQ5THJ4 4388 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 IGLV5-39A0A0G2JS06 123 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 LY6G6CO95867 125 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 C5orf38Q86SI9 138 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 PLEKHB2Q96CS7 222 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
LEMD3-202ENST00000539442 LEPROTO15243 131 aa7.11□□□□□ -1.27
LEMD3-202ENST00000539442 APOMO95445 188 aa7.11□□□□□ -1.27
LEMD3-202ENST00000539442 MALP21145 153 aa7.11□□□□□ -1.27
LEMD3-202ENST00000539442 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
LEMD3-202ENST00000539442 NMUP48645 174 aa7.1□□□□□ -1.27
LEMD3-202ENST00000539442 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
LEMD3-202ENST00000539442 IGHV3-64A0A075B6Q5 118 aa7.09□□□□□ -1.27
LEMD3-202ENST00000539442 IGKV2D-26A0A0A0MRZ7 120 aa7.09□□□□□ -1.27
LEMD3-202ENST00000539442 J3QQQ9 107 aa7.09□□□□□ -1.27
LEMD3-202ENST00000539442 LGALS3P17931 250 aaKnown RBP7.09□□□□□ -1.27
LEMD3-202ENST00000539442 Q6ZR54 194 aa7.09□□□□□ -1.27
LEMD3-202ENST00000539442 DNAH1Q9P2D7 4330 aa7.08□□□□□ -1.28
LEMD3-202ENST00000539442 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
LEMD3-202ENST00000539442 COX8AP10176 69 aa7.08□□□□□ -1.28
LEMD3-202ENST00000539442 Q8IZM0 81 aa7.08□□□□□ -1.28
LEMD3-202ENST00000539442 TSTD3H0UI37 97 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 DLEU1O43261 78 aa7.07□□□□□ -1.28
LEMD3-202ENST00000539442 PRSS2P07478 247 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms