RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 C7orf77A4D0Y5 90 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 PYY3Q5JQD4 70 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 SSBP3-AS1Q7Z2R9 100 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 SPRR4Q96PI1 79 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 C20orf78Q9BR46 151 aa0.81□□□□□ -2.28
SNHG1-210ENST00000539303 FAM103A1Q9BTL3 118 aaKnown RBP0.81□□□□□ -2.28
SNHG1-210ENST00000539303 S100A3P33764 101 aa0.8□□□□□ -2.28
SNHG1-210ENST00000539303 SPINK7P58062 85 aa0.8□□□□□ -2.28
SNHG1-210ENST00000539303 FDCSPQ8NFU4 85 aa0.8□□□□□ -2.28
SNHG1-210ENST00000539303 TMEM263Q8WUH6 116 aaKnown RBP0.8□□□□□ -2.28
SNHG1-210ENST00000539303 FBN3Q75N90 2809 aa0.8□□□□□ -2.28
SNHG1-210ENST00000539303 RGPD3A6NKT7 1758 aaPredicted RBP0.8□□□□□ -2.28
SNHG1-210ENST00000539303 MYH4Q9Y623 1939 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 NUP188Q5SRE5 1749 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
SNHG1-210ENST00000539303 ZNF720Q7Z2F6 126 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 JMJD1CQ15652 2540 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 ARHGEF12Q9NZN5 1544 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 ERCC6L2Q5T890 1561 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 CACNA1CQ13936 2221 aa0.79□□□□□ -2.28
SNHG1-210ENST00000539303 FCGBPQ9Y6R7 5405 aaPredicted RBP0.78□□□□□ -2.28
SNHG1-210ENST00000539303 A0A087WVE0 104 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 K7EP34 96 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 COX6A2Q02221 97 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 C10orf113Q5VZT2 155 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 LCN9Q8WX39 176 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 HIGD1BQ9P298 99 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 ASXL3Q9C0F0 2248 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 NRXN1Q9ULB1 1477 aa0.78□□□□□ -2.28
SNHG1-210ENST00000539303 CYB5AP00167 134 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 SMIM11AP58511 58 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 ETDBQ3ZM63 59 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 S100A16Q96FQ6 103 aaKnown RBP0.77□□□□□ -2.29
SNHG1-210ENST00000539303 LINC00846Q9NV44 126 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 EDC4Q6P2E9 1401 aaKnown RBP0.77□□□□□ -2.29
SNHG1-210ENST00000539303 ATP10BO94823 1461 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 UNC13BO14795 1591 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 LRP6O75581 1613 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
SNHG1-210ENST00000539303 TENM1Q9UKZ4 2725 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 ABCC3O15438 1527 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 A0A0D9SFI3 127 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 TRBV6-1A0A0K0K1D8 114 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 F8WEM9 126 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 BCE1O60756 84 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 LEPROTL1O95214 131 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 ARMS2P0C7Q2 107 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 PEA15Q15121 130 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 LINC01600Q96MT4 127 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 PSENENQ9NZ42 101 aa0.76□□□□□ -2.29
SNHG1-210ENST00000539303 KNDC1Q76NI1 1749 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 EPRSP07814 1512 aaKnown RBP0.75□□□□□ -2.29
SNHG1-210ENST00000539303 ABCC2Q92887 1545 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 PLIN4Q96Q06 1357 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 H3BQF6 201 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 DEFB107AQ8IZN7 70 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 SCRIBQ14160 1630 aa0.75□□□□□ -2.29
SNHG1-210ENST00000539303 FANCAO15360 1455 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 C1orf167Q5SNV9 1468 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 D6R8Y8 96 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 HMGN3Q15651 99 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 MUSTN1Q8IVN3 82 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 SPCS1Q9Y6A9 102 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 PPLO60437 1756 aa0.74□□□□□ -2.29
SNHG1-210ENST00000539303 CCDC18Q5T9S5 1454 aa0.73□□□□□ -2.29
SNHG1-210ENST00000539303 CEP162Q5TB80 1403 aa0.73□□□□□ -2.29
SNHG1-210ENST00000539303 GNGT1P63211 74 aa0.73□□□□□ -2.29
SNHG1-210ENST00000539303 DNAJC13O75165 2243 aa0.73□□□□□ -2.29
SNHG1-210ENST00000539303 POLA1P09884 1462 aaPredicted RBP0.73□□□□□ -2.29
SNHG1-210ENST00000539303 NLRP1Q9C000 1473 aa0.73□□□□□ -2.29
SNHG1-210ENST00000539303 UACAQ9BZF9 1416 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 ANKRD36A6QL64 1941 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 MYO3AQ8NEV4 1616 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 H0Y9P7 68 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 TDRG1Q3Y452 100 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 CNFNQ9BYD5 112 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 RABAC1Q9UI14 185 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 PRO0255Q9UI72 69 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 MED14O60244 1454 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 UBR1Q8IWV7 1749 aa0.72□□□□□ -2.29
SNHG1-210ENST00000539303 MEGF8Q7Z7M0 2845 aa0.71□□□□□ -2.3
SNHG1-210ENST00000539303 AHCTF1Q8WYP5 2266 aa0.71□□□□□ -2.3
SNHG1-210ENST00000539303 HMGN2P05204 90 aaKnown RBP0.71□□□□□ -2.3
SNHG1-210ENST00000539303 ALKAL2Q6UX46 152 aa0.71□□□□□ -2.3
SNHG1-210ENST00000539303 TP53AIP1Q9HCN2 124 aa0.71□□□□□ -2.3
SNHG1-210ENST00000539303 SUPT6HQ7KZ85 1726 aaKnown RBP0.71□□□□□ -2.3
SNHG1-210ENST00000539303 LAMC1P11047 1609 aa0.71□□□□□ -2.3
SNHG1-210ENST00000539303 PAPPA2Q9BXP8 1791 aa0.7□□□□□ -2.3
SNHG1-210ENST00000539303 XRN1Q8IZH2 1706 aaKnown RBP0.7□□□□□ -2.3
SNHG1-210ENST00000539303 SHPRHQ149N8 1683 aa0.7□□□□□ -2.3
SNHG1-210ENST00000539303 IQSEC2Q5JU85 1478 aa0.7□□□□□ -2.3
SNHG1-210ENST00000539303 C6orf201Q7Z4U5 140 aa0.7□□□□□ -2.3
SNHG1-210ENST00000539303 S100A13Q99584 98 aa0.7□□□□□ -2.3
SNHG1-210ENST00000539303 PLAC8Q9NZF1 115 aa0.7□□□□□ -2.3
SNHG1-210ENST00000539303 CRYBG1Q9Y4K1 1723 aa0.69□□□□□ -2.3
SNHG1-210ENST00000539303 C5P01031 1676 aa0.69□□□□□ -2.3
SNHG1-210ENST00000539303 TARBP1Q13395 1621 aaKnown RBP0.69□□□□□ -2.3
SNHG1-210ENST00000539303 A0A1B0GU69 56 aa0.69□□□□□ -2.3
SNHG1-210ENST00000539303 SNRPFP62306 86 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms