RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 PSORS1C2Q9UIG4 136 aa5.19□□□□□ -1.58
USP28-203ENST00000537490 LRP2P98164 4655 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 TRBV24-1A0A075B6N3 115 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 SMIM27A0A1W2PRY6 76 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 LINC00862A6NCI5 91 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 RPL18AQ02543 176 aaKnown RBP5.18□□□□□ -1.58
USP28-203ENST00000537490 SPAG11BQ08648 103 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 ADIRFQ15847 76 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 TMEM18Q96B42 140 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 C20orf78Q9BR46 151 aa5.18□□□□□ -1.58
USP28-203ENST00000537490 IGHV3OR16-9A0A0B4J2B5 98 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 TNFRSF6BO95407 300 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 MT-ND6P03923 174 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 CKS2P33552 79 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 RPL32P62910 135 aaKnown RBP5.17□□□□□ -1.58
USP28-203ENST00000537490 SRSF3P84103 164 aaKnown RBP5.17□□□□□ -1.58
USP28-203ENST00000537490 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 C1orf137Q5JT78 98 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 C10orf25Q5T742 122 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 ORAOV1Q8WV07 137 aa5.17□□□□□ -1.58
USP28-203ENST00000537490 TCAPO15273 167 aa5.16□□□□□ -1.58
USP28-203ENST00000537490 NPYP01303 97 aa5.16□□□□□ -1.58
USP28-203ENST00000537490 MRPL54Q6P161 138 aaKnown RBP5.16□□□□□ -1.58
USP28-203ENST00000537490 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
USP28-203ENST00000537490 OR10D4PQ8NGN7 298 aa5.16□□□□□ -1.58
USP28-203ENST00000537490 SMIM2Q9BVW6 85 aa5.16□□□□□ -1.58
USP28-203ENST00000537490 MRPL35Q9NZE8 188 aaKnown RBP5.16□□□□□ -1.58
USP28-203ENST00000537490 NAT8Q9UHE5 227 aa5.16□□□□□ -1.58
USP28-203ENST00000537490 A0A1B0GW15 77 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 A0A1B0GXF2 115 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 FAM168BA1KXE4 195 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 D6R8Y8 96 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 MRPS36P82909 103 aaKnown RBP5.15□□□□□ -1.59
USP28-203ENST00000537490 UNQ6190/PRO20217Q6UXQ8 127 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 SPANXA1Q9NS26 97 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 C6orf48Q9UBA6 75 aa5.15□□□□□ -1.59
USP28-203ENST00000537490 A0A087WZ39 114 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 TMEM238LA0A1B0GVL6 79 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 IFITM10A6NMD0 228 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 F8WDY8 70 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 NDUFA1O15239 70 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 IGLV7-43P04211 117 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 TLX1NBP0CAT3 122 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 HBBP68871 147 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 KIAA0087Q14695 138 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 PEA15Q15121 130 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 KRTAP7-1Q8IUC3 87 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 PRR26Q8N8Z3 221 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 IMMP2LQ96T52 175 aa5.14□□□□□ -1.59
USP28-203ENST00000537490 A0A1B0GVG6 124 aa5.13□□□□□ -1.59
USP28-203ENST00000537490 F8W036 122 aa5.13□□□□□ -1.59
USP28-203ENST00000537490 S100A8P05109 93 aa5.13□□□□□ -1.59
USP28-203ENST00000537490 GAGE2EQ4V326 116 aa5.13□□□□□ -1.59
USP28-203ENST00000537490 GAGE2DQ9UEU5 116 aa5.13□□□□□ -1.59
USP28-203ENST00000537490 PPBPP02775 128 aa5.12□□□□□ -1.59
USP28-203ENST00000537490 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
USP28-203ENST00000537490 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
USP28-203ENST00000537490 FAM19A5Q7Z5A7 132 aaPredicted RBP5.12□□□□□ -1.59
USP28-203ENST00000537490 DIRC1Q969H9 104 aa5.12□□□□□ -1.59
USP28-203ENST00000537490 SMDT1Q9H4I9 107 aa5.12□□□□□ -1.59
USP28-203ENST00000537490 IGLV4-3A0A075B6K6 122 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 TGIF2-C20orf24A0A0A6YYL0 155 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
USP28-203ENST00000537490 H0Y9J4 135 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 RAB5AP20339 215 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 IFI27P40305 119 aaPredicted RBP5.11□□□□□ -1.59
USP28-203ENST00000537490 C2orf82Q6UX34 121 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 ORMDL3Q8N138 153 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 PRELID3AQ96N28 172 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 PYGO1Q9Y3Y4 419 aa5.11□□□□□ -1.59
USP28-203ENST00000537490 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
USP28-203ENST00000537490 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
USP28-203ENST00000537490 ZC2HC1BQ5TFG8 222 aa5.1□□□□□ -1.59
USP28-203ENST00000537490 TRBV30A0A0K0K1B3 111 aa5.09□□□□□ -1.59
USP28-203ENST00000537490 PRSS47A8MTI9 375 aa5.09□□□□□ -1.59
USP28-203ENST00000537490 M0QXV9 152 aa5.09□□□□□ -1.59
USP28-203ENST00000537490 UBE2D1P51668 147 aa5.09□□□□□ -1.59
USP28-203ENST00000537490 C9orf129Q5T035 196 aaKnown RBP5.09□□□□□ -1.59
USP28-203ENST00000537490 ATP5L2Q7Z4Y8 100 aa5.09□□□□□ -1.59
USP28-203ENST00000537490 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
USP28-203ENST00000537490 NDUFC2-KCTD14E9PQ53 114 aa5.08□□□□□ -1.6
USP28-203ENST00000537490 UBE2BP63146 152 aa5.08□□□□□ -1.6
USP28-203ENST00000537490 TEX43Q6ZNM6 134 aa5.08□□□□□ -1.6
USP28-203ENST00000537490 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
USP28-203ENST00000537490 LINC01561Q8N1V8 128 aa5.08□□□□□ -1.6
USP28-203ENST00000537490 PACRGQ96M98 296 aaPredicted RBP5.08□□□□□ -1.6
USP28-203ENST00000537490 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 C2orf66Q6UXQ4 117 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 Q8N8P6 123 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 AMELXQ99217 191 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 CYSLTR1Q9Y271 337 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 LAMTOR2Q9Y2Q5 125 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
USP28-203ENST00000537490 LPAP08519 4548 aa5.06□□□□□ -1.6
USP28-203ENST00000537490 IGIPA6NJ69 53 aa5.06□□□□□ -1.6
USP28-203ENST00000537490 Q6ZN92 141 aa5.06□□□□□ -1.6
USP28-203ENST00000537490 LINC00469Q8N7U9 141 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms