RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 LINC00315P59091 139 aa7.94□□□□□ -1.14
CLSTN3-207ENST00000537408 ARHGAP32A7KAX9 2087 aa7.94□□□□□ -1.14
CLSTN3-207ENST00000537408 Q8N2B8 174 aa7.94□□□□□ -1.14
CLSTN3-207ENST00000537408 NPBQ8NG41 125 aa7.94□□□□□ -1.14
CLSTN3-207ENST00000537408 Q9H8V8 135 aa7.94□□□□□ -1.14
CLSTN3-207ENST00000537408 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
CLSTN3-207ENST00000537408 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 Q6YL49 198 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 C16orf95Q9H693 158 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 RAI1Q7Z5J4 1906 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 TRBV10-3A0A0K0K1G6 114 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 F8WEM9 126 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 IGF1P05019 195 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 FP248Q71RG6 208 aaPredicted RBP7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 A8MZ25 164 aa7.93□□□□□ -1.14
CLSTN3-207ENST00000537408 BLCAPP62952 87 aa7.92□□□□□ -1.14
CLSTN3-207ENST00000537408 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
CLSTN3-207ENST00000537408 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
CLSTN3-207ENST00000537408 CCKP06307 115 aa7.92□□□□□ -1.14
CLSTN3-207ENST00000537408 VPS13AQ96RL7 3174 aa7.92□□□□□ -1.14
CLSTN3-207ENST00000537408 SETXQ7Z333 2677 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 M0QY20 66 aa7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 C19orf54Q5BKX5 351 aa7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 C11orf68Q9H3H3 251 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 SORL1Q92673 2214 aa7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 UBE2L6O14933 153 aa7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 RNASE13Q5GAN3 156 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 DMDP11532 3685 aa7.91□□□□□ -1.14
CLSTN3-207ENST00000537408 KLKP1Q107X0 134 aa7.9□□□□□ -1.14
CLSTN3-207ENST00000537408 ORMDL1Q9P0S3 153 aa7.9□□□□□ -1.14
CLSTN3-207ENST00000537408 NCR3O14931 201 aa7.9□□□□□ -1.14
CLSTN3-207ENST00000537408 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
CLSTN3-207ENST00000537408 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.14
CLSTN3-207ENST00000537408 JMJD7-PLA2G4BH0Y9G9 81 aa7.9□□□□□ -1.15
CLSTN3-207ENST00000537408 C22orf24Q9Y442 160 aa7.9□□□□□ -1.15
CLSTN3-207ENST00000537408 SNURFQ9Y675 71 aa7.9□□□□□ -1.15
CLSTN3-207ENST00000537408 IGHV7-81A0A0B4J1V7 117 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 IL17DQ8TAD2 202 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 ITPR3Q14573 2671 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 Q8N9W7 124 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 RETNQ9HD89 108 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 LINC00474Q9P2X8 69 aa7.89□□□□□ -1.15
CLSTN3-207ENST00000537408 AVPP01185 164 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 KMT2BQ9UMN6 2715 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 PIK3CD-AS1Q5SR53 167 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 LINC00482Q8N8I6 264 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 DMXL1Q9Y485 3027 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 F6UB75 175 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 LECT2O14960 151 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
CLSTN3-207ENST00000537408 RMI2Q96E14 147 aa7.87□□□□□ -1.15
CLSTN3-207ENST00000537408 OBSCN-AS1Q96MR7 158 aa7.87□□□□□ -1.15
CLSTN3-207ENST00000537408 ATRQ13535 2644 aa7.87□□□□□ -1.15
CLSTN3-207ENST00000537408 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 A0A087WYN8 130 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 ODF3BA8MYP8 253 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 SS18Q15532 418 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 PLAC8L1A1L4L8 177 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 NDUFA4O00483 81 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 STHQ8IWL8 128 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 C5orf56Q8N8D9 126 aa7.86□□□□□ -1.15
CLSTN3-207ENST00000537408 FLNAP21333 2647 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 RPL36AP83881 106 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 C9orf66Q5T8R8 295 aa7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 RPL36ALQ969Q0 106 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 CMC4P56277 68 aaPredicted RBP7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 APRG1Q8IVJ8 170 aa7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 IGHV3-73A0A0B4J1V6 119 aa7.85□□□□□ -1.15
CLSTN3-207ENST00000537408 CFHR3Q02985 330 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 CD164Q04900 197 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 MIR7-3HGQ8N6C7 128 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 U3KQE9 123 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 TRGV2A0A075B6R0 118 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 A6NDX4 124 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 FRYLO94915 3013 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 FREM2Q5SZK8 3169 aa7.84□□□□□ -1.15
CLSTN3-207ENST00000537408 SOSTDC1Q6X4U4 206 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 MRPL55Q7Z7F7 128 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 LINC01006Q8NI28 216 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 CCL24O00175 119 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 MIFP14174 115 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 HTN3P15516 51 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 SND1-IT1Q9HBX3 110 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 KRTAP24-1Q3LI83 254 aa7.83□□□□□ -1.16
CLSTN3-207ENST00000537408 H3BUA1 57 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 SPINK13Q1W4C9 94 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 DAD1P61803 113 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 SMIM11BQ8TCY0 68 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 DMXL2Q8TDJ6 3036 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 DEFB131AP59861 70 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 FRYQ5TBA9 3013 aa7.82□□□□□ -1.16
CLSTN3-207ENST00000537408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 IGHV3-16A0A0C4DH30 117 aa7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 IGKV2-29A2NJV5 120 aaPredicted RBP7.81□□□□□ -1.16
CLSTN3-207ENST00000537408 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms