RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
LGR5-202ENST00000536515 LST1O00453 97 aa9.32□□□□□ -0.92
LGR5-202ENST00000536515 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
LGR5-202ENST00000536515 MTORP42345 2549 aa9.32□□□□□ -0.92
LGR5-202ENST00000536515 LY6G6DO95868 133 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 CSDC2Q9Y534 153 aaKnown RBP9.31□□□□□ -0.92
LGR5-202ENST00000536515 ACANP16112 2415 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 SMR3AQ99954 134 aa9.31□□□□□ -0.92
LGR5-202ENST00000536515 H3BT86 120 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 GIG44P09565 113 aaPredicted RBP9.3□□□□□ -0.92
LGR5-202ENST00000536515 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 GAGE7O76087 117 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 CITED1Q99966 193 aa9.3□□□□□ -0.92
LGR5-202ENST00000536515 F5H768 121 aa9.29□□□□□ -0.92
LGR5-202ENST00000536515 CRLF1O75462 422 aa9.29□□□□□ -0.92
LGR5-202ENST00000536515 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
LGR5-202ENST00000536515 TRGV2A0A075B6R0 118 aa9.29□□□□□ -0.92
LGR5-202ENST00000536515 UBE2L6O14933 153 aa9.29□□□□□ -0.92
LGR5-202ENST00000536515 TMEM243Q9BU79 118 aa9.28□□□□□ -0.92
LGR5-202ENST00000536515 TRAV26-1A0A087WT03 109 aa9.28□□□□□ -0.92
LGR5-202ENST00000536515 SNCGO76070 127 aa9.28□□□□□ -0.92
LGR5-202ENST00000536515 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
LGR5-202ENST00000536515 HIVEP1P15822 2718 aa9.27□□□□□ -0.93
LGR5-202ENST00000536515 IGKV3OR2-268A0A0C4DH90 116 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 GAGE2EQ4V326 116 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 C15orf53Q8NAA6 179 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 LINC01006Q8NI28 216 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 ANAPC13Q9BS18 74 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 GAGE2DQ9UEU5 116 aa9.26□□□□□ -0.93
LGR5-202ENST00000536515 COX7A2LO14548 114 aa9.25□□□□□ -0.93
LGR5-202ENST00000536515 GAGE6Q13070 117 aa9.25□□□□□ -0.93
LGR5-202ENST00000536515 COPS9Q8WXC6 57 aa9.25□□□□□ -0.93
LGR5-202ENST00000536515 TRGV4A0A0C4DH28 118 aa9.24□□□□□ -0.93
LGR5-202ENST00000536515 HERV-K104P63124 156 aa9.24□□□□□ -0.93
LGR5-202ENST00000536515 SHISA2Q6UWI4 295 aa9.24□□□□□ -0.93
LGR5-202ENST00000536515 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
LGR5-202ENST00000536515 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
LGR5-202ENST00000536515 TRBV6-4A0A1B0GX49 114 aa9.23□□□□□ -0.93
LGR5-202ENST00000536515 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
LGR5-202ENST00000536515 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
LGR5-202ENST00000536515 IGLV1-51P01701 117 aa9.22□□□□□ -0.93
LGR5-202ENST00000536515 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
LGR5-202ENST00000536515 CSNK1G2-AS1Q8NCQ2 148 aa9.22□□□□□ -0.93
LGR5-202ENST00000536515 FN1P02751 2386 aaKnown RBP9.22□□□□□ -0.93
LGR5-202ENST00000536515 IGLV4-60A0A075B6I1 120 aa9.22□□□□□ -0.93
LGR5-202ENST00000536515 INAFM1C9JVW0 142 aa9.22□□□□□ -0.93
LGR5-202ENST00000536515 DEFB121Q5J5C9 76 aa9.21□□□□□ -0.93
LGR5-202ENST00000536515 COX7B2Q8TF08 81 aa9.21□□□□□ -0.93
LGR5-202ENST00000536515 F8P00451 2351 aa9.21□□□□□ -0.93
LGR5-202ENST00000536515 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.94
LGR5-202ENST00000536515 ANK3Q12955 4377 aaKnown RBP9.21□□□□□ -0.94
LGR5-202ENST00000536515 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
LGR5-202ENST00000536515 CHCHD5Q9BSY4 110 aa9.2□□□□□ -0.94
LGR5-202ENST00000536515 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
LGR5-202ENST00000536515 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
LGR5-202ENST00000536515 FHL2Q14192 279 aa9.2□□□□□ -0.94
LGR5-202ENST00000536515 TRBV6-8A0A0A6YYG3 113 aa9.19□□□□□ -0.94
LGR5-202ENST00000536515 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
LGR5-202ENST00000536515 FAM218AQ96MZ4 157 aa9.19□□□□□ -0.94
LGR5-202ENST00000536515 MAST4O15021 2626 aa9.19□□□□□ -0.94
LGR5-202ENST00000536515 FAM240AA0A1B0GVK7 77 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 RNASE1P07998 156 aaKnown RBP9.18□□□□□ -0.94
LGR5-202ENST00000536515 C16orf95Q9H693 158 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 FAM110AQ9BQ89 295 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 LINC00158P58513 81 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 Q6Q795 121 aa9.18□□□□□ -0.94
LGR5-202ENST00000536515 TRACP01848 142 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 CRPP02741 224 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 HILS1P60008 231 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 BAALC-AS2P0C853 105 aa9.17□□□□□ -0.94
LGR5-202ENST00000536515 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
LGR5-202ENST00000536515 TRAV13-2A0A0B4J235 113 aa9.16□□□□□ -0.94
LGR5-202ENST00000536515 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
LGR5-202ENST00000536515 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
LGR5-202ENST00000536515 MRPL23Q16540 153 aaKnown RBP9.15□□□□□ -0.94
LGR5-202ENST00000536515 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
LGR5-202ENST00000536515 Q9HAA7 133 aa9.15□□□□□ -0.94
LGR5-202ENST00000536515 PFN2P35080 140 aa9.14□□□□□ -0.95
LGR5-202ENST00000536515 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
LGR5-202ENST00000536515 A0A087WZ39 114 aa9.14□□□□□ -0.95
LGR5-202ENST00000536515 PF4P02776 101 aa9.14□□□□□ -0.95
LGR5-202ENST00000536515 CCL18P55774 89 aa9.14□□□□□ -0.95
LGR5-202ENST00000536515 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms