RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 ASCC3Q8N3C0 2202 aaKnown RBP0.72□□□□□ -2.29
VBP1-203ENST00000535916 K7EP34 96 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 UQCRHP07919 91 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 PMCHL1Q16048 86 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 PYY3Q5JQD4 70 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 BTAF1O14981 1849 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 KCPQ6ZWJ8 1503 aa0.72□□□□□ -2.29
VBP1-203ENST00000535916 SPTBP11277 2137 aa0.71□□□□□ -2.3
VBP1-203ENST00000535916 UQCRHLA0A096LP55 91 aa0.71□□□□□ -2.3
VBP1-203ENST00000535916 PRB3Q04118 309 aaPredicted RBP0.71□□□□□ -2.3
VBP1-203ENST00000535916 UBE2DNLQ8IWF7 75 aa0.71□□□□□ -2.3
VBP1-203ENST00000535916 HIGD1BQ9P298 99 aa0.71□□□□□ -2.3
VBP1-203ENST00000535916 C1orf167Q5SNV9 1468 aa0.71□□□□□ -2.3
VBP1-203ENST00000535916 MAGI2Q86UL8 1455 aa0.71□□□□□ -2.3
VBP1-203ENST00000535916 CCDC18Q5T9S5 1454 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 A0A1B0GWA3 101 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 PSMG4Q5JS54 123 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 Q6JHZ5 121 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 TMEM263Q8WUH6 116 aaKnown RBP0.7□□□□□ -2.3
VBP1-203ENST00000535916 PRO1933Q9H354 126 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 LINC00846Q9NV44 126 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 KIF14Q15058 1648 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 NHSL1Q5SYE7 1610 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 MAP3K4Q9Y6R4 1608 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 RGPD4Q7Z3J3 1758 aa0.7□□□□□ -2.3
VBP1-203ENST00000535916 SHPRHQ149N8 1683 aa0.69□□□□□ -2.3
VBP1-203ENST00000535916 ARHGAP35Q9NRY4 1499 aa0.69□□□□□ -2.3
VBP1-203ENST00000535916 TARBP1Q13395 1621 aaKnown RBP0.69□□□□□ -2.3
VBP1-203ENST00000535916 A0A087WVE0 104 aa0.69□□□□□ -2.3
VBP1-203ENST00000535916 C10orf113Q5VZT2 155 aa0.69□□□□□ -2.3
VBP1-203ENST00000535916 PPLO60437 1756 aa0.69□□□□□ -2.3
VBP1-203ENST00000535916 EDC4Q6P2E9 1401 aaKnown RBP0.69□□□□□ -2.3
VBP1-203ENST00000535916 XRN1Q8IZH2 1706 aaKnown RBP0.69□□□□□ -2.3
VBP1-203ENST00000535916 MED13LQ71F56 2210 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 ZNF815PA8K554 130 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 HAMPP81172 84 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 SSBP3-AS1Q7Z2R9 100 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 LCN9Q8WX39 176 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 UACAQ9BZF9 1416 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 PLAC8Q9NZF1 115 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 CUX1P39880 1505 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 PLIN4Q96Q06 1357 aa0.68□□□□□ -2.3
VBP1-203ENST00000535916 RGPD3A6NKT7 1758 aaPredicted RBP0.68□□□□□ -2.3
VBP1-203ENST00000535916 PDCD11Q14690 1871 aaKnown RBP0.67□□□□□ -2.3
VBP1-203ENST00000535916 ERCC6L2Q5T890 1561 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 DIP2BQ9P265 1576 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 WNK3Q9BYP7 1800 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 F5P12259 2224 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 C7orf77A4D0Y5 90 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 BCE1O60756 84 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 FDCSPQ8NFU4 85 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 TMEM131LA2VDJ0 1609 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 ALKQ9UM73 1620 aa0.67□□□□□ -2.3
VBP1-203ENST00000535916 DOCK11Q5JSL3 2073 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 ABCA1O95477 2261 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 PAPPA2Q9BXP8 1791 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 F8WEM9 126 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 ARMS2P0C7Q2 107 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 PI4KAP42356 2102 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 ETDBQ3ZM63 59 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 LINC01600Q96MT4 127 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 KNDC1Q76NI1 1749 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 PLXNB2O15031 1838 aa0.66□□□□□ -2.3
VBP1-203ENST00000535916 C5P01031 1676 aa0.65□□□□□ -2.3
VBP1-203ENST00000535916 FBN2P35556 2912 aa0.65□□□□□ -2.3
VBP1-203ENST00000535916 TRBV6-1A0A0K0K1D8 114 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 CYB5AP00167 134 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 SPINK7P58062 85 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 HMGN3Q15651 99 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 TDRG1Q3Y452 100 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 S100A16Q96FQ6 103 aaKnown RBP0.65□□□□□ -2.31
VBP1-203ENST00000535916 PSENENQ9NZ42 101 aa0.65□□□□□ -2.31
VBP1-203ENST00000535916 NEXMIFQ5QGS0 1516 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 PAPPAQ13219 1627 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 A0A0G2JMZ2 1700 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 I3L2K1 104 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 ZNF720Q7Z2F6 126 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 CNFNQ9BYD5 112 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 CRYBG1Q9Y4K1 1723 aa0.64□□□□□ -2.31
VBP1-203ENST00000535916 ERVK-7P63135 1459 aa0.63□□□□□ -2.31
VBP1-203ENST00000535916 H0Y9P7 68 aa0.63□□□□□ -2.31
VBP1-203ENST00000535916 H3BQF6 201 aa0.63□□□□□ -2.31
VBP1-203ENST00000535916 RABAC1Q9UI14 185 aa0.63□□□□□ -2.31
VBP1-203ENST00000535916 BIVM-ERCC5R4GMW8 1640 aa0.63□□□□□ -2.31
VBP1-203ENST00000535916 DCAF1Q9Y4B6 1507 aa0.63□□□□□ -2.31
VBP1-203ENST00000535916 SAMD9Q5K651 1589 aa0.62□□□□□ -2.31
VBP1-203ENST00000535916 LINC00959A0A1B0GUT2 108 aa0.62□□□□□ -2.31
VBP1-203ENST00000535916 HMGN2P05204 90 aaKnown RBP0.62□□□□□ -2.31
VBP1-203ENST00000535916 COX6A2Q02221 97 aa0.62□□□□□ -2.31
VBP1-203ENST00000535916 PEA15Q15121 130 aa0.62□□□□□ -2.31
VBP1-203ENST00000535916 DEFB107AQ8IZN7 70 aa0.62□□□□□ -2.31
VBP1-203ENST00000535916 SLIT1O75093 1534 aa0.61□□□□□ -2.31
VBP1-203ENST00000535916 TP53AIP1Q9HCN2 124 aa0.61□□□□□ -2.31
VBP1-203ENST00000535916 UBE2D4Q9Y2X8 147 aa0.61□□□□□ -2.31
VBP1-203ENST00000535916 ZDBF2Q9HCK1 2354 aa0.61□□□□□ -2.31
VBP1-203ENST00000535916 MYO7BQ6PIF6 2116 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms