RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 MIAQ16674 131 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 HIST2H2BDQ6DRA6 164 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 NTM-AS1Q6ZSK4 140 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CSNK1G2-AS1Q8NCQ2 148 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 OVOL2Q9BRP0 275 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TSSC4Q9Y5U2 329 aaPredicted RBP4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SONP18583 2426 aaKnown RBP4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 FLNAP21333 2647 aaKnown RBP4.15□□□□□ -1.74
TNFRSF1A-206ENST00000535038 INAFM1C9JVW0 142 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 F5H768 121 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 J3QR89 54 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 NDUFA7O95182 113 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 IGLV1-51P01701 117 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 IFITM1P13164 125 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 PSMB2P49721 201 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LINC00242Q5T6M2 205 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TEN1Q86WV5 123 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 MTURNQ8N3F0 131 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LINC01006Q8NI28 216 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 PPDPFLQ8WWR9 84 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TMEM101Q96IK0 257 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CITED2Q99967 270 aaPredicted RBP4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 XCL2Q9UBD3 114 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CDKN2A-AS1Q9UH64 79 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 NDUFA12Q9UI09 145 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CHD6Q8TD26 2715 aa4.15□□□□□ -1.75
TNFRSF1A-206ENST00000535038 IGHV3-64A0A075B6Q5 118 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 IGHV3-38A0A0C4DH36 116 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LOC107984156A0A0G2JMH3 177 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 A8MZ25 164 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 K7EQD1 137 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CIDEAO60543 219 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 HTN1P15515 57 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 COX6A2Q02221 97 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 RNASE13Q5GAN3 156 aaKnown RBP4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 Q6ZTI0 123 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 DAZ4Q86SG3 579 aaKnown RBP4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ARL17AQ8IVW1 177 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 STHQ8IWL8 128 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LINC00612Q8N6U2 182 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 GTSF1LQ9H1H1 148 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 DAZ3Q9NR90 486 aaKnown RBP4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CDC42SE2Q9NRR3 84 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ERG28Q9UKR5 140 aa4.14□□□□□ -1.75
TNFRSF1A-206ENST00000535038 WNK1Q9H4A3 2382 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SETXQ7Z333 2677 aaKnown RBP4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SMIM1B2RUZ4 78 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 H7C423 109 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SPINK8P0C7L1 97 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 HERVK_113P63121 156 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 YAE1D1Q9NRH1 226 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 NOTCH3Q9UM47 2321 aa4.13□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TRGV1A0A0A0MS02 117 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TRBV6-4A0A1B0GX49 114 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 PRSS2P07478 247 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 HILS1P60008 231 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LINC01620Q4KN68 170 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 DEFB121Q5J5C9 76 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SFTA2Q6UW10 78 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ANKRD29Q8N6D5 301 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 C16orf74Q96GX8 76 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ICOSQ9Y6W8 199 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CCDC168Q8NDH2 2452 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 JMJD1CQ15652 2540 aa4.12□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TRBV10-2A0A0K0K1G8 114 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LST1O00453 97 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SLC25A20O43772 301 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 KRTAP10-3P60369 221 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ATXN8Q156A1 80 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SOSTDC1Q6X4U4 206 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LINC00308Q8TCZ7 52 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ZNF418Q8TF45 676 aaPredicted RBP4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 GEMIN7Q9H840 131 aaKnown RBP4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 ACANP16112 2415 aa4.11□□□□□ -1.75
TNFRSF1A-206ENST00000535038 KMT2BQ9UMN6 2715 aaPredicted RBP4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 C9JAW5 83 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 H3BT86 120 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SMAGPQ0VAQ4 97 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TMEM243Q9BU79 118 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 WFDC10AQ9H1F0 79 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 NOP10Q9NPE3 64 aaKnown RBP4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 TENM4Q6N022 2769 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 CUBNO60494 3623 aa4.1□□□□□ -1.75
TNFRSF1A-206ENST00000535038 NF1P21359 2839 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 C2CD3Q4AC94 2353 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 MTORP42345 2549 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 LOC100131303A0A0U1RQF7 123 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 SCGB1C2P0DMR2 95 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 XGP55808 180 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 HERV-K104P63124 156 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 GAGE4Q13068 117 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 GAGE5Q13069 117 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 HIST2H2BCQ6DN03 193 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 DGAT2L7PQ6IED9 249 aa4.09□□□□□ -1.75
TNFRSF1A-206ENST00000535038 KIR2DL5BQ8NHK3 375 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms