RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 SULT1A2P50226 295 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 ZNF345Q14585 488 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 KIAA1644Q3SXP7 199 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 SMIM29Q86T20 159 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 STPG4Q8N801 248 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.73□□□□□ -1.81
SOX6-216ENST00000533658 MED9Q9NWA0 146 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
SOX6-216ENST00000533658 IGHV3-64A0A075B6Q5 118 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 A0A0D9SG52 128 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 HMSDA8MTL9 139 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 UBE2L6O14933 153 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
SOX6-216ENST00000533658 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 GTSF1Q8WW33 167 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 CHCHD10Q8WYQ3 142 aaPredicted RBP3.72□□□□□ -1.81
SOX6-216ENST00000533658 PGLYRP4Q96LB8 373 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 MANBALQ9NQG1 85 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 NIT2Q9NQR4 276 aa3.72□□□□□ -1.81
SOX6-216ENST00000533658 A0A096LNI7 61 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 A0A1B0GWB2 263 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 SMKR1H3BMG3 65 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 BCL2P10415 239 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 XCL1P47992 114 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 CACNG7P62955 275 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 MEF2BQ02080 365 aaPredicted RBP3.71□□□□□ -1.82
SOX6-216ENST00000533658 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
SOX6-216ENST00000533658 COX19Q49B96 90 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 RNASE13Q5GAN3 156 aaKnown RBP3.71□□□□□ -1.82
SOX6-216ENST00000533658 Q6ZN92 141 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 DPH3P1Q9H4G8 78 aa3.71□□□□□ -1.82
SOX6-216ENST00000533658 TRAV1-1A0A0B4J248 108 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 H7C1H1 209 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 TRGC1P0CF51 173 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 FGF6P10767 208 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 CTRLP40313 264 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 RPS10P46783 165 aaKnown RBP3.7□□□□□ -1.82
SOX6-216ENST00000533658 RPS20P60866 119 aaKnown RBP3.7□□□□□ -1.82
SOX6-216ENST00000533658 PKIAP61925 76 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 TMEM97Q5BJF2 176 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 AMMECR1LQ6DCA0 310 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 Q6ZRU5 148 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 C9orf62Q8N4C0 152 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 RPP21Q9H633 154 aaKnown RBP3.7□□□□□ -1.82
SOX6-216ENST00000533658 TMEM242Q9NWH2 141 aa3.7□□□□□ -1.82
SOX6-216ENST00000533658 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.69□□□□□ -1.82
SOX6-216ENST00000533658 TRAV8-4A0A0B4J246 113 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 SDHAF1A6NFY7 115 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 F2Z2F3 143 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 CCL25O15444 150 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 GATCO43716 136 aaKnown RBP3.69□□□□□ -1.82
SOX6-216ENST00000533658 NCR2O95944 276 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 ALKAL2Q6UX46 152 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 PLAC8Q9NZF1 115 aa3.69□□□□□ -1.82
SOX6-216ENST00000533658 LPAP08519 4548 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 A0A0J9YXV3 536 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 PDE6DO43924 150 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 APCSP02743 223 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 RAB4AP20338 218 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 RAB5AP20339 215 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 EIF5AP63241 154 aaKnown RBP3.68□□□□□ -1.82
SOX6-216ENST00000533658 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
SOX6-216ENST00000533658 MRPL52Q86TS9 123 aaKnown RBP3.68□□□□□ -1.82
SOX6-216ENST00000533658 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
SOX6-216ENST00000533658 GVQW2A0A096LPI5 108 aaPredicted RBP3.67□□□□□ -1.82
SOX6-216ENST00000533658 LINC00959A0A1B0GUT2 108 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 RAB14P61106 215 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 PDZD11Q5EBL8 140 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 AMN1Q8IY45 258 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 RNF185Q96GF1 192 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 CNFNQ9BYD5 112 aa3.67□□□□□ -1.82
SOX6-216ENST00000533658 IGLV4-69A0A075B6H9 119 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 A0A1W2PNN7 141 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 C5orf38Q86SI9 138 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 AKAP14Q86UN6 197 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 SLC51BQ86UW2 128 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 OR5A1Q8NGJ0 315 aa3.66□□□□□ -1.82
SOX6-216ENST00000533658 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
SOX6-216ENST00000533658 TRAV13-1A0A0B4J241 112 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 HIGD1CA8MV81 97 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 I3L3M4 83 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 ESDP10768 282 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 Q6ZUT4 128 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 TCTE3Q8IZS6 198 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 SMIM12Q96EX1 92 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 CARD19Q96LW7 228 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 LINC01600Q96MT4 127 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 ST20Q9HBF5 79 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 CDC42SE2Q9NRR3 84 aa3.65□□□□□ -1.83
SOX6-216ENST00000533658 FAM168BA1KXE4 195 aa3.64□□□□□ -1.83
SOX6-216ENST00000533658 C9JQL5 133 aa3.64□□□□□ -1.83
SOX6-216ENST00000533658 POLR2KP53803 58 aaKnown RBP3.64□□□□□ -1.83
SOX6-216ENST00000533658 NDUFV3P56181 108 aaKnown RBP3.64□□□□□ -1.83
SOX6-216ENST00000533658 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
SOX6-216ENST00000533658 RPL39P62891 51 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms