RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 HIST1H2BMQ99879 126 aa14.51□□□□□ -0.09
PKP3-210ENST00000533249 SPACA4Q8TDM5 124 aa14.5□□□□□ -0.09
PKP3-210ENST00000533249 GAGE12HA6NDE8 117 aa14.49□□□□□ -0.09
PKP3-210ENST00000533249 LINC00614P0C842 121 aa14.49□□□□□ -0.09
PKP3-210ENST00000533249 C15orf56Q8N910 161 aa14.48□□□□□ -0.09
PKP3-210ENST00000533249 K7EMI3 77 aa14.47□□□□□ -0.09
PKP3-210ENST00000533249 TSHBP01222 138 aa14.47□□□□□ -0.09
PKP3-210ENST00000533249 NDUFA6P56556 154 aa14.47□□□□□ -0.09
PKP3-210ENST00000533249 ORMDL2Q53FV1 153 aa14.47□□□□□ -0.09
PKP3-210ENST00000533249 S100A6P06703 90 aa14.46□□□□□ -0.09
PKP3-210ENST00000533249 HIGD2BQ4VC39 106 aa14.46□□□□□ -0.09
PKP3-210ENST00000533249 CFAP161Q6P656 301 aa14.46□□□□□ -0.09
PKP3-210ENST00000533249 G0S2P27469 103 aa14.45□□□□□ -0.1
PKP3-210ENST00000533249 COX6A2Q02221 97 aa14.45□□□□□ -0.1
PKP3-210ENST00000533249 TMEM18Q96B42 140 aa14.45□□□□□ -0.1
PKP3-210ENST00000533249 CHCHD1Q96BP2 118 aaKnown RBP14.45□□□□□ -0.1
PKP3-210ENST00000533249 PLAC8Q9NZF1 115 aa14.45□□□□□ -0.1
PKP3-210ENST00000533249 HSBP1O75506 76 aa14.44□□□□□ -0.1
PKP3-210ENST00000533249 AMMECR1LQ6DCA0 310 aa14.44□□□□□ -0.1
PKP3-210ENST00000533249 C7orf33Q8WU49 177 aa14.44□□□□□ -0.1
PKP3-210ENST00000533249 SERF1AO75920 110 aa14.43□□□□□ -0.1
PKP3-210ENST00000533249 SMAGPQ0VAQ4 97 aa14.42□□□□□ -0.1
PKP3-210ENST00000533249 CHCHD10Q8WYQ3 142 aaPredicted RBP14.42□□□□□ -0.1
PKP3-210ENST00000533249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.41□□□□□ -0.1
PKP3-210ENST00000533249 IGKV2-24A0A0C4DH68 120 aa14.41□□□□□ -0.1
PKP3-210ENST00000533249 IGKV2-29A2NJV5 120 aaPredicted RBP14.41□□□□□ -0.1
PKP3-210ENST00000533249 MAJINQ3KP22 176 aa14.41□□□□□ -0.1
PKP3-210ENST00000533249 TMA7Q9Y2S6 64 aaKnown RBP14.41□□□□□ -0.1
PKP3-210ENST00000533249 LINC01546A6NGU7 62 aa14.39□□□□□ -0.11
PKP3-210ENST00000533249 URB1-AS1Q96HZ7 61 aa14.39□□□□□ -0.11
PKP3-210ENST00000533249 CYSLTR1Q9Y271 337 aa14.39□□□□□ -0.11
PKP3-210ENST00000533249 ESDP10768 282 aa14.38□□□□□ -0.11
PKP3-210ENST00000533249 H7C423 109 aa14.37□□□□□ -0.11
PKP3-210ENST00000533249 FGF6P10767 208 aa14.37□□□□□ -0.11
PKP3-210ENST00000533249 PMCHL1Q16048 86 aa14.37□□□□□ -0.11
PKP3-210ENST00000533249 STPG4Q8N801 248 aa14.37□□□□□ -0.11
PKP3-210ENST00000533249 GVQW2A0A096LPI5 108 aaPredicted RBP14.36□□□□□ -0.11
PKP3-210ENST00000533249 LINC01549A6NIU2 74 aa14.36□□□□□ -0.11
PKP3-210ENST00000533249 HBDP02042 147 aa14.36□□□□□ -0.11
PKP3-210ENST00000533249 C2orf66Q6UXQ4 117 aa14.36□□□□□ -0.11
PKP3-210ENST00000533249 TMEM101Q96IK0 257 aa14.36□□□□□ -0.11
PKP3-210ENST00000533249 RPL39P62891 51 aaKnown RBP14.35□□□□□ -0.11
PKP3-210ENST00000533249 COA6Q5JTJ3 125 aaKnown RBP14.35□□□□□ -0.11
PKP3-210ENST00000533249 FAM19A2Q8N3H0 131 aa14.35□□□□□ -0.11
PKP3-210ENST00000533249 A0A096LNI7 61 aa14.34□□□□□ -0.11
PKP3-210ENST00000533249 FOXI1Q12951 378 aa14.34□□□□□ -0.11
PKP3-210ENST00000533249 SCGB3A1Q96QR1 104 aa14.34□□□□□ -0.11
PKP3-210ENST00000533249 NUPR1O60356 82 aa14.33□□□□□ -0.12
PKP3-210ENST00000533249 XCL1P47992 114 aa14.33□□□□□ -0.12
PKP3-210ENST00000533249 LINC00310P59036 64 aa14.33□□□□□ -0.12
PKP3-210ENST00000533249 PRR3P79522 188 aaKnown RBP14.33□□□□□ -0.12
PKP3-210ENST00000533249 TOMM6Q96B49 74 aa14.33□□□□□ -0.12
PKP3-210ENST00000533249 S100A2P29034 98 aa14.32□□□□□ -0.12
PKP3-210ENST00000533249 PDZD11Q5EBL8 140 aa14.32□□□□□ -0.12
PKP3-210ENST00000533249 OR5A1Q8NGJ0 315 aa14.32□□□□□ -0.12
PKP3-210ENST00000533249 ZNF25P17030 456 aaPredicted RBP14.31□□□□□ -0.12
PKP3-210ENST00000533249 LINC00526Q96FQ7 95 aa14.31□□□□□ -0.12
PKP3-210ENST00000533249 SPANXA1Q9NS26 97 aa14.31□□□□□ -0.12
PKP3-210ENST00000533249 CCL25O15444 150 aa14.3□□□□□ -0.12
PKP3-210ENST00000533249 SNRPEP62304 92 aaKnown RBP14.3□□□□□ -0.12
PKP3-210ENST00000533249 LINC00959A0A1B0GUT2 108 aa14.29□□□□□ -0.12
PKP3-210ENST00000533249 FABP4P15090 132 aa14.29□□□□□ -0.12
PKP3-210ENST00000533249 MRPL52Q86TS9 123 aaKnown RBP14.29□□□□□ -0.12
PKP3-210ENST00000533249 LINC01600Q96MT4 127 aa14.29□□□□□ -0.12
PKP3-210ENST00000533249 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
PKP3-210ENST00000533249 UBE2D4Q9Y2X8 147 aa14.29□□□□□ -0.12
PKP3-210ENST00000533249 ATP5LO75964 103 aa14.28□□□□□ -0.12
PKP3-210ENST00000533249 LEPROTL1O95214 131 aa14.28□□□□□ -0.12
PKP3-210ENST00000533249 Q6ZN92 141 aa14.28□□□□□ -0.12
PKP3-210ENST00000533249 ERASQ7Z444 233 aa14.28□□□□□ -0.12
PKP3-210ENST00000533249 TMEM141Q96I45 108 aa14.28□□□□□ -0.12
PKP3-210ENST00000533249 HSPB8Q9UJY1 196 aa14.28□□□□□ -0.12
PKP3-210ENST00000533249 TNXBP22105 4242 aa14.27□□□□□ -0.12
PKP3-210ENST00000533249 A0A096LNJ9 63 aa14.27□□□□□ -0.13
PKP3-210ENST00000533249 IGHV1-58A0A0C4DH39 117 aa14.27□□□□□ -0.13
PKP3-210ENST00000533249 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.27□□□□□ -0.13
PKP3-210ENST00000533249 ODF1Q14990 250 aa14.27□□□□□ -0.13
PKP3-210ENST00000533249 PAPPA-AS1Q5QFB9 102 aa14.27□□□□□ -0.13
PKP3-210ENST00000533249 PYGO1Q9Y3Y4 419 aa14.27□□□□□ -0.13
PKP3-210ENST00000533249 CARD19Q96LW7 228 aa14.26□□□□□ -0.13
PKP3-210ENST00000533249 TIMM17AQ99595 171 aa14.26□□□□□ -0.13
PKP3-210ENST00000533249 LINC00474Q9P2X8 69 aa14.26□□□□□ -0.13
PKP3-210ENST00000533249 PKIGQ9Y2B9 76 aa14.25□□□□□ -0.13
PKP3-210ENST00000533249 CSDC2Q9Y534 153 aaKnown RBP14.25□□□□□ -0.13
PKP3-210ENST00000533249 IGIPA6NJ69 53 aa14.24□□□□□ -0.13
PKP3-210ENST00000533249 SS18Q15532 418 aa14.24□□□□□ -0.13
PKP3-210ENST00000533249 HIST3H2BBQ8N257 126 aa14.24□□□□□ -0.13
PKP3-210ENST00000533249 ZNF664Q8N3J9 261 aa14.24□□□□□ -0.13
PKP3-210ENST00000533249 VCX2Q9H322 139 aa14.24□□□□□ -0.13
PKP3-210ENST00000533249 LRP2P98164 4655 aa14.24□□□□□ -0.13
PKP3-210ENST00000533249 C5orf52A6NGY3 159 aa14.23□□□□□ -0.13
PKP3-210ENST00000533249 IFI27L1Q96BM0 104 aa14.23□□□□□ -0.13
PKP3-210ENST00000533249 OPRPNQ99935 248 aaPredicted RBP14.23□□□□□ -0.13
PKP3-210ENST00000533249 IGLV4-3A0A075B6K6 122 aa14.22□□□□□ -0.13
PKP3-210ENST00000533249 ZNF561-AS1K7EIQ3 104 aa14.22□□□□□ -0.13
PKP3-210ENST00000533249 NPSP0C0P6 89 aa14.22□□□□□ -0.13
PKP3-210ENST00000533249 MRPS36P82909 103 aaKnown RBP14.22□□□□□ -0.13
PKP3-210ENST00000533249 SYCNQ0VAF6 134 aa14.22□□□□□ -0.13
PKP3-210ENST00000533249 TEX43Q6ZNM6 134 aa14.22□□□□□ -0.13
PKP3-210ENST00000533249 Q6ZUT4 128 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms