RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 SMKR1H3BMG3 65 aa6.27□□□□□ -1.41
CTNND1-235ENST00000533189 NUPR1O60356 82 aa6.27□□□□□ -1.41
CTNND1-235ENST00000533189 PPP1R17O96001 155 aa6.27□□□□□ -1.41
CTNND1-235ENST00000533189 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
CTNND1-235ENST00000533189 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
CTNND1-235ENST00000533189 A0A087X002 238 aa6.26□□□□□ -1.41
CTNND1-235ENST00000533189 TRBV30A0A0K0K1B3 111 aa6.26□□□□□ -1.41
CTNND1-235ENST00000533189 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
CTNND1-235ENST00000533189 TAGLN2P37802 199 aaKnown RBP6.26□□□□□ -1.41
CTNND1-235ENST00000533189 FAM231DQ6ZW35 169 aa6.26□□□□□ -1.41
CTNND1-235ENST00000533189 RETNLBQ9BQ08 111 aa6.26□□□□□ -1.41
CTNND1-235ENST00000533189 IFITM10A6NMD0 228 aa6.25□□□□□ -1.41
CTNND1-235ENST00000533189 PPP1R2P9O14990 202 aa6.25□□□□□ -1.41
CTNND1-235ENST00000533189 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
CTNND1-235ENST00000533189 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
CTNND1-235ENST00000533189 CT83Q5H943 113 aa6.25□□□□□ -1.41
CTNND1-235ENST00000533189 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
CTNND1-235ENST00000533189 PACRGQ96M98 296 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-235ENST00000533189 CTDSP1Q9GZU7 261 aa6.25□□□□□ -1.41
CTNND1-235ENST00000533189 TGIF2-C20orf24A0A0A6YYL0 155 aa6.24□□□□□ -1.41
CTNND1-235ENST00000533189 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
CTNND1-235ENST00000533189 HBBP68871 147 aa6.24□□□□□ -1.41
CTNND1-235ENST00000533189 LBHQ53QV2 105 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-235ENST00000533189 NRACQ8N912 160 aa6.24□□□□□ -1.41
CTNND1-235ENST00000533189 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
CTNND1-235ENST00000533189 TCAPO15273 167 aa6.23□□□□□ -1.41
CTNND1-235ENST00000533189 RPL39P62891 51 aaKnown RBP6.23□□□□□ -1.41
CTNND1-235ENST00000533189 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
CTNND1-235ENST00000533189 LCE2DQ5TA82 110 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-235ENST00000533189 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
CTNND1-235ENST00000533189 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
CTNND1-235ENST00000533189 C22orf24Q9Y442 160 aa6.23□□□□□ -1.41
CTNND1-235ENST00000533189 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
CTNND1-235ENST00000533189 RIGQ13278 110 aa6.22□□□□□ -1.41
CTNND1-235ENST00000533189 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
CTNND1-235ENST00000533189 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
CTNND1-235ENST00000533189 LINC00304Q8N9R0 145 aa6.22□□□□□ -1.41
CTNND1-235ENST00000533189 BCE1O60756 84 aa6.21□□□□□ -1.42
CTNND1-235ENST00000533189 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
CTNND1-235ENST00000533189 ZNF727A8MUV8 499 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 TMEM250H0YL14 139 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 CEBPGP53567 150 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 LINC00469Q8N7U9 141 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 FAM104AQ969W3 186 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 C20orf78Q9BR46 151 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
CTNND1-235ENST00000533189 PRSS2P07478 247 aa6.19□□□□□ -1.42
CTNND1-235ENST00000533189 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
CTNND1-235ENST00000533189 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
CTNND1-235ENST00000533189 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
CTNND1-235ENST00000533189 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
CTNND1-235ENST00000533189 LINC00862A6NCI5 91 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 CKS2P33552 79 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 CKS1BP61024 79 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 RGS21Q2M5E4 152 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 LINC00242Q5T6M2 205 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 FAM104BQ5XKR9 115 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 XAGE1AQ9HD64 81 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 TP73-AS1Q9UF72 201 aa6.18□□□□□ -1.42
CTNND1-235ENST00000533189 TRBV24-1A0A075B6N3 115 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 IGKV2D-26A0A0A0MRZ7 120 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 IFI27P40305 119 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-235ENST00000533189 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 LINC01561Q8N1V8 128 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 OSTCQ9NRP0 149 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 TOMM7Q9P0U1 55 aa6.17□□□□□ -1.42
CTNND1-235ENST00000533189 TNFRSF6BO95407 300 aa6.16□□□□□ -1.42
CTNND1-235ENST00000533189 CTAG1AP78358 180 aa6.16□□□□□ -1.42
CTNND1-235ENST00000533189 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
CTNND1-235ENST00000533189 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
CTNND1-235ENST00000533189 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
CTNND1-235ENST00000533189 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.42
CTNND1-235ENST00000533189 UBE2AP49459 152 aa6.15□□□□□ -1.42
CTNND1-235ENST00000533189 Q6ZN92 141 aa6.15□□□□□ -1.42
CTNND1-235ENST00000533189 TMEM141Q96I45 108 aa6.15□□□□□ -1.42
CTNND1-235ENST00000533189 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
CTNND1-235ENST00000533189 IGLV4-3A0A075B6K6 122 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 RPL37AP8A6NKH3 93 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 RAB5AP20339 215 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 TEX43Q6ZNM6 134 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 LINC00167Q96N53 147 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 PYGO1Q9Y3Y4 419 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 V9GYV3 84 aa6.14□□□□□ -1.43
CTNND1-235ENST00000533189 SLC51BQ86UW2 128 aa6.13□□□□□ -1.43
CTNND1-235ENST00000533189 Q8IZM0 81 aa6.13□□□□□ -1.43
CTNND1-235ENST00000533189 ALKBH7Q9BT30 221 aaPredicted RBP6.13□□□□□ -1.43
CTNND1-235ENST00000533189 BATF3Q9NR55 127 aa6.13□□□□□ -1.43
CTNND1-235ENST00000533189 A0A1B0GW15 77 aa6.12□□□□□ -1.43
CTNND1-235ENST00000533189 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
CTNND1-235ENST00000533189 D6R8Y8 96 aa6.12□□□□□ -1.43
CTNND1-235ENST00000533189 SRSF3P84103 164 aaKnown RBP6.12□□□□□ -1.43
CTNND1-235ENST00000533189 EIF5A2Q9GZV4 153 aaKnown RBP6.12□□□□□ -1.43
CTNND1-235ENST00000533189 F8VRH5 84 aa6.11□□□□□ -1.43
CTNND1-235ENST00000533189 NPYP01303 97 aa6.11□□□□□ -1.43
CTNND1-235ENST00000533189 BLOC1S1P78537 153 aa6.11□□□□□ -1.43
CTNND1-235ENST00000533189 ASB16-AS1Q495Z4 193 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms