RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 RPL36AP83881 106 aaKnown RBP7.39□□□□□ -1.23
CAPN1-221ENST00000531068 UBE2V1Q13404 147 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 PMVKQ15126 192 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 ZC2HC1BQ5TFG8 222 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 BAALCQ8WXS3 180 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 RPL36ALQ969Q0 106 aaKnown RBP7.39□□□□□ -1.23
CAPN1-221ENST00000531068 DNAJC30Q96LL9 226 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 TM2D2Q9BX73 214 aa7.39□□□□□ -1.23
CAPN1-221ENST00000531068 TRAV8-3A0A0A6YYJ7 113 aa7.38□□□□□ -1.23
CAPN1-221ENST00000531068 E9PLD3 99 aa7.38□□□□□ -1.23
CAPN1-221ENST00000531068 I3L3M4 83 aa7.38□□□□□ -1.23
CAPN1-221ENST00000531068 PYGO1Q9Y3Y4 419 aa7.38□□□□□ -1.23
CAPN1-221ENST00000531068 TRBV7-3A0A075B6L6 115 aa7.37□□□□□ -1.23
CAPN1-221ENST00000531068 NMUP48645 174 aa7.37□□□□□ -1.23
CAPN1-221ENST00000531068 PCP2Q8IVA1 136 aa7.37□□□□□ -1.23
CAPN1-221ENST00000531068 Q9HAA7 133 aa7.37□□□□□ -1.23
CAPN1-221ENST00000531068 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
CAPN1-221ENST00000531068 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
CAPN1-221ENST00000531068 TSHBP01222 138 aa7.36□□□□□ -1.23
CAPN1-221ENST00000531068 UBE2D3P61077 147 aa7.36□□□□□ -1.23
CAPN1-221ENST00000531068 UBE2D2P62837 147 aa7.36□□□□□ -1.23
CAPN1-221ENST00000531068 C20orf203Q8NBC4 194 aa7.36□□□□□ -1.23
CAPN1-221ENST00000531068 CST9LQ9H4G1 147 aa7.36□□□□□ -1.23
CAPN1-221ENST00000531068 IGKV2D-26A0A0A0MRZ7 120 aa7.35□□□□□ -1.23
CAPN1-221ENST00000531068 C11orf86A6NJI1 115 aa7.35□□□□□ -1.23
CAPN1-221ENST00000531068 HERVK_113P61574 105 aa7.35□□□□□ -1.23
CAPN1-221ENST00000531068 MAPKAPK5-AS1Q8N8E1 139 aa7.35□□□□□ -1.23
CAPN1-221ENST00000531068 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
CAPN1-221ENST00000531068 RMI2Q96E14 147 aa7.35□□□□□ -1.23
CAPN1-221ENST00000531068 CHCHD7Q9BUK0 85 aa7.35□□□□□ -1.23
CAPN1-221ENST00000531068 LRCOL1A6NCL2 159 aa7.34□□□□□ -1.23
CAPN1-221ENST00000531068 C9orf118A6NHY6 69 aa7.34□□□□□ -1.23
CAPN1-221ENST00000531068 DAZ4Q86SG3 579 aaKnown RBP7.34□□□□□ -1.23
CAPN1-221ENST00000531068 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
CAPN1-221ENST00000531068 DAZ3Q9NR90 486 aaKnown RBP7.34□□□□□ -1.23
CAPN1-221ENST00000531068 RYR1P21817 5038 aa7.34□□□□□ -1.24
CAPN1-221ENST00000531068 TRBV6-8A0A0A6YYG3 113 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 GCSHP23434 173 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 PTTG1IPP53801 180 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 NTM-AS1Q6ZSK4 140 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 Q8N1X5 172 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 CHAC1Q9BUX1 264 aa7.33□□□□□ -1.24
CAPN1-221ENST00000531068 IGLV4-69A0A075B6H9 119 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 TMEM262E9PQX1 116 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 SMIM13P0DJ93 91 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 CEND1Q8N111 149 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 Q8N814 137 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 TIMM21Q9BVV7 248 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 SPANXA1Q9NS26 97 aa7.32□□□□□ -1.24
CAPN1-221ENST00000531068 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 CCL25O15444 150 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 FUSP35637 526 aaKnown RBP eCLIP7.31□□□□□ -1.24
CAPN1-221ENST00000531068 VAMP3Q15836 100 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 Q8N3U1 123 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 AMELXQ99217 191 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 TP73-AS1Q9UF72 201 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 KLK12Q9UKR0 248 aa7.31□□□□□ -1.24
CAPN1-221ENST00000531068 KRTAP10-1P60331 282 aa7.3□□□□□ -1.24
CAPN1-221ENST00000531068 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
CAPN1-221ENST00000531068 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
CAPN1-221ENST00000531068 GTF2H5Q6ZYL4 71 aa7.3□□□□□ -1.24
CAPN1-221ENST00000531068 CHCHD5Q9BSY4 110 aa7.3□□□□□ -1.24
CAPN1-221ENST00000531068 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
CAPN1-221ENST00000531068 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
CAPN1-221ENST00000531068 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
CAPN1-221ENST00000531068 RPL39P62891 51 aaKnown RBP7.29□□□□□ -1.24
CAPN1-221ENST00000531068 DEFB104AQ8WTQ1 72 aa7.29□□□□□ -1.24
CAPN1-221ENST00000531068 UBE2WQ96B02 151 aa7.29□□□□□ -1.24
CAPN1-221ENST00000531068 VCX2Q9H322 139 aa7.29□□□□□ -1.24
CAPN1-221ENST00000531068 SPANXB1Q9NS25 103 aaPredicted RBP7.29□□□□□ -1.24
CAPN1-221ENST00000531068 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 A6NJY4 79 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 XGP55808 180 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 OR5A1Q8NGJ0 315 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 PLEKHB2Q96CS7 222 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 KRTAP4-5Q9BYR2 181 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 CSDC2Q9Y534 153 aaKnown RBP7.28□□□□□ -1.24
CAPN1-221ENST00000531068 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
CAPN1-221ENST00000531068 TMEM223A0PJW6 202 aa7.27□□□□□ -1.25
CAPN1-221ENST00000531068 LEPROTO15243 131 aa7.27□□□□□ -1.25
CAPN1-221ENST00000531068 CRPP02741 224 aa7.27□□□□□ -1.25
CAPN1-221ENST00000531068 ANGP03950 147 aaKnown RBP7.27□□□□□ -1.25
CAPN1-221ENST00000531068 COTL1Q14019 142 aa7.27□□□□□ -1.25
CAPN1-221ENST00000531068 AMMECR1LQ6DCA0 310 aa7.27□□□□□ -1.25
CAPN1-221ENST00000531068 C1orf43Q9BWL3 253 aa7.27□□□□□ -1.25
CAPN1-221ENST00000531068 TINCRA0A1B0GVN0 87 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 A0A1W2PPM0 123 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 GAGE10A6NGK3 116 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 ZNF815PA8K554 130 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 EPM2AB3EWF7 344 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 FXYD2P54710 66 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 FAM19A3Q7Z5A8 133 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
CAPN1-221ENST00000531068 H7C423 109 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms