RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
CTNND1-229ENST00000531014 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
CTNND1-229ENST00000531014 HCG22E2RYF7 251 aa5.35□□□□□ -1.55
CTNND1-229ENST00000531014 DEFB1P60022 68 aa5.35□□□□□ -1.55
CTNND1-229ENST00000531014 LINC00482Q8N8I6 264 aa5.35□□□□□ -1.55
CTNND1-229ENST00000531014 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-229ENST00000531014 CD164Q04900 197 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 USF3Q68DE3 2245 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 Q6YL49 198 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 YLPM1P49750 1951 aaKnown RBP5.34□□□□□ -1.55
CTNND1-229ENST00000531014 DSCAML1Q8TD84 2053 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 ACYP2P14621 99 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 ZNF80P51504 273 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-229ENST00000531014 Q8N814 137 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 MAP6D1Q9H9H5 199 aa5.34□□□□□ -1.55
CTNND1-229ENST00000531014 ANKRD36A6QL64 1941 aa5.34□□□□□ -1.56
CTNND1-229ENST00000531014 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.56
CTNND1-229ENST00000531014 U3KQK5 164 aa5.34□□□□□ -1.56
CTNND1-229ENST00000531014 IGF2RP11717 2491 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 EML6Q6ZMW3 1958 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 NBASA2RRP1 2371 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 C4orf3Q8WVX3 66 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 TRBV6-4A0A1B0GX49 114 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 PCNX1Q96RV3 2341 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 M0QY20 66 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 LINC00575Q6W349 94 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 IGLV2-8P01709 118 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 TP53TG3Q9ULZ0 132 aa5.33□□□□□ -1.56
CTNND1-229ENST00000531014 PTPN13Q12923 2485 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 TP53BP1Q12888 1972 aaPredicted RBP5.32□□□□□ -1.56
CTNND1-229ENST00000531014 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 FSTL3O95633 263 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 SMR3AQ99954 134 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 C7orf65Q6ZTY9 151 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 ODF3L1Q8IXM7 274 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 IGLV3-1P01715 115 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 Q6ZS46 218 aa5.32□□□□□ -1.56
CTNND1-229ENST00000531014 RITA1Q96K30 269 aa5.31□□□□□ -1.56
CTNND1-229ENST00000531014 Q9UF83 564 aa5.31□□□□□ -1.56
CTNND1-229ENST00000531014 FASNP49327 2511 aaKnown RBP5.31□□□□□ -1.56
CTNND1-229ENST00000531014 DENND4CQ5VZ89 1909 aa5.31□□□□□ -1.56
CTNND1-229ENST00000531014 Q6ZTC4 211 aa5.31□□□□□ -1.56
CTNND1-229ENST00000531014 Q8IZM0 81 aa5.31□□□□□ -1.56
CTNND1-229ENST00000531014 CIRBP-AS1Q8TBR5 109 aa5.31□□□□□ -1.56
CTNND1-229ENST00000531014 DOCK4Q8N1I0 1966 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 BCE1O60756 84 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 A0A087WSZ3 146 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 NUPR2A6NF83 97 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 RSPO1Q2MKA7 263 aaPredicted RBP5.3□□□□□ -1.56
CTNND1-229ENST00000531014 LINC01548A6NM66 108 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 C11orf71Q6IPW1 123 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 LINC00959A0A1B0GUT2 108 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 UNQ9165/PRO28630Q6UXU0 137 aa5.3□□□□□ -1.56
CTNND1-229ENST00000531014 SHANK1Q9Y566 2161 aa5.29□□□□□ -1.56
CTNND1-229ENST00000531014 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
CTNND1-229ENST00000531014 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
CTNND1-229ENST00000531014 SBSPONQ8IVN8 264 aa5.29□□□□□ -1.56
CTNND1-229ENST00000531014 NYNRINQ9P2P1 1898 aaKnown RBP5.29□□□□□ -1.56
CTNND1-229ENST00000531014 TSHBP01222 138 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 LMO4P61968 165 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 TP53AIP1Q9HCN2 124 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 A0A087WYN8 130 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 MSMPQ1L6U9 139 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 PRRC2AP48634 2157 aaKnown RBP5.28□□□□□ -1.56
CTNND1-229ENST00000531014 ABCA2Q9BZC7 2435 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 Q6ZSR3 168 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 LINC00846Q9NV44 126 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
CTNND1-229ENST00000531014 REG3GQ6UW15 175 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 SPG11Q96JI7 2443 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 Q9BRP9 147 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 DOPEY1Q5JWR5 2465 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 EGFEM1PQ0D2K5 195 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 LELP1Q5T871 98 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 H3BPC8 53 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 K7EQG2 157 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 CYP4F30PQ9H0H9 118 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 EP400Q96L91 3159 aa5.27□□□□□ -1.57
CTNND1-229ENST00000531014 CYSRT1A8MQ03 144 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 C16orf95Q9H693 158 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 MALRD1Q5VYJ5 2156 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 NAV3Q8IVL0 2385 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 F8WDY8 70 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 EDN2P20800 178 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 KRTAP24-1Q3LI83 254 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 LCA10Q71F78 164 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 SORL1Q92673 2214 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
CTNND1-229ENST00000531014 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
CTNND1-229ENST00000531014 MED13LQ71F56 2210 aa5.25□□□□□ -1.57
CTNND1-229ENST00000531014 IGLV1-47P01700 117 aa5.25□□□□□ -1.57
CTNND1-229ENST00000531014 POLR2KP53803 58 aaKnown RBP5.24□□□□□ -1.57
CTNND1-229ENST00000531014 SPTBN4Q9H254 2564 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 NAV2Q8IVL1 2488 aa5.24□□□□□ -1.57
CTNND1-229ENST00000531014 E7EUB6 86 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms