RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
AMBRA1-207ENST00000529553 TRBV27A0A0K0K1C4 114 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 TMEM250H0YL14 139 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 POLR2KP53803 58 aaKnown RBP6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 CENPWQ5EE01 88 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 CLLU1Q5K131 121 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 ORAOV1Q8WV07 137 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 CTDSP1Q9GZU7 261 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 MED9Q9NWA0 146 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
AMBRA1-207ENST00000529553 FAM229BQ4G0N7 80 aa6.68□□□□□ -1.34
AMBRA1-207ENST00000529553 LBHQ53QV2 105 aaPredicted RBP6.68□□□□□ -1.34
AMBRA1-207ENST00000529553 LINC00242Q5T6M2 205 aa6.68□□□□□ -1.34
AMBRA1-207ENST00000529553 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
AMBRA1-207ENST00000529553 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 NDUFC2-KCTD14E9PQ53 114 aa6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 CFC1BP0CG36 223 aa6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 EIF5A2Q9GZV4 153 aaKnown RBP6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 RNASE7Q9H1E1 156 aaKnown RBP6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 UBE2D4Q9Y2X8 147 aa6.67□□□□□ -1.34
AMBRA1-207ENST00000529553 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 K7EN84 100 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 BCE1O60756 84 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 GNG4P50150 75 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 OCC1Q8TAD7 63 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 C22orf24Q9Y442 160 aa6.66□□□□□ -1.34
AMBRA1-207ENST00000529553 VCYO14598 125 aa6.65□□□□□ -1.34
AMBRA1-207ENST00000529553 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.34
AMBRA1-207ENST00000529553 RNASE13Q5GAN3 156 aaKnown RBP6.64□□□□□ -1.35
AMBRA1-207ENST00000529553 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
AMBRA1-207ENST00000529553 FCER1GP30273 86 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 RAB14P61106 215 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 PEA15Q15121 130 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 TMEM18Q96B42 140 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 SMIM7Q9BQ49 75 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 TP73-AS1Q9UF72 201 aa6.63□□□□□ -1.35
AMBRA1-207ENST00000529553 IGKV2D-26A0A0A0MRZ7 120 aa6.62□□□□□ -1.35
AMBRA1-207ENST00000529553 ZNF727A8MUV8 499 aa6.62□□□□□ -1.35
AMBRA1-207ENST00000529553 CEBPGP53567 150 aa6.62□□□□□ -1.35
AMBRA1-207ENST00000529553 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
AMBRA1-207ENST00000529553 LINC01551Q86U37 167 aa6.62□□□□□ -1.35
AMBRA1-207ENST00000529553 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
AMBRA1-207ENST00000529553 Q6ZUT4 128 aa6.61□□□□□ -1.35
AMBRA1-207ENST00000529553 KIR2DL4Q99706 377 aa6.61□□□□□ -1.35
AMBRA1-207ENST00000529553 LINC00862A6NCI5 91 aa6.6□□□□□ -1.35
AMBRA1-207ENST00000529553 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
AMBRA1-207ENST00000529553 PPP1R17O96001 155 aa6.6□□□□□ -1.35
AMBRA1-207ENST00000529553 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
AMBRA1-207ENST00000529553 FAM74A3Q4VXF1 159 aa6.6□□□□□ -1.35
AMBRA1-207ENST00000529553 FAM231DQ6ZW35 169 aa6.6□□□□□ -1.35
AMBRA1-207ENST00000529553 MRPL55Q7Z7F7 128 aaKnown RBP6.59□□□□□ -1.35
AMBRA1-207ENST00000529553 TMEM191AQ9H0A3 160 aa6.59□□□□□ -1.35
AMBRA1-207ENST00000529553 NAT8Q9UHE5 227 aa6.59□□□□□ -1.35
AMBRA1-207ENST00000529553 ADCYAP1P18509 176 aa6.58□□□□□ -1.36
AMBRA1-207ENST00000529553 RAB4AP20338 218 aa6.58□□□□□ -1.36
AMBRA1-207ENST00000529553 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
AMBRA1-207ENST00000529553 MT1HP80294 61 aa6.58□□□□□ -1.36
AMBRA1-207ENST00000529553 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
AMBRA1-207ENST00000529553 TGIF2-C20orf24A0A0A6YYL0 155 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 MRPS36P82909 103 aaKnown RBP6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 UQCC3Q6UW78 93 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 C2orf82Q6UX34 121 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 COMMD7Q86VX2 200 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 FAM104AQ969W3 186 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 OSTCQ9NRP0 149 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 V9GYV3 84 aa6.57□□□□□ -1.36
AMBRA1-207ENST00000529553 TMEM218A2RU14 115 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 A8MWL6 223 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 TCAPO15273 167 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 GATCO43716 136 aaKnown RBP6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 SUMO2P61956 95 aaKnown RBP6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 ADIRFQ15847 76 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 CT83Q5H943 113 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 LINC01561Q8N1V8 128 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 SPANXA1Q9NS26 97 aa6.56□□□□□ -1.36
AMBRA1-207ENST00000529553 PPP1R2P9O14990 202 aa6.55□□□□□ -1.36
AMBRA1-207ENST00000529553 TNFRSF6BO95407 300 aa6.55□□□□□ -1.36
AMBRA1-207ENST00000529553 HBBP68871 147 aa6.55□□□□□ -1.36
AMBRA1-207ENST00000529553 KRTAP19-2Q3LHN2 52 aa6.55□□□□□ -1.36
AMBRA1-207ENST00000529553 BORCS7Q96B45 105 aa6.55□□□□□ -1.36
AMBRA1-207ENST00000529553 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
AMBRA1-207ENST00000529553 IFITM10A6NMD0 228 aa6.54□□□□□ -1.36
AMBRA1-207ENST00000529553 UBE2AP49459 152 aa6.54□□□□□ -1.36
AMBRA1-207ENST00000529553 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-207ENST00000529553 C10orf91Q5T1B1 145 aa6.54□□□□□ -1.36
AMBRA1-207ENST00000529553 LINC00469Q8N7U9 141 aa6.54□□□□□ -1.36
AMBRA1-207ENST00000529553 NRACQ8N912 160 aa6.54□□□□□ -1.36
AMBRA1-207ENST00000529553 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms