RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PIK3CD-AS1	Q5SR53	167 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540	NTN5	Q8WTR8	489 aa	Predicted RBP	10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540	TM2D3	Q9BRN9	247 aa		10.38	□□□□□ -0.75
NR1H3-231	ENST00000529540	TINCR	A0A1B0GVN0	87 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540	TRIAP1	O43715	76 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540	TIMM17B	O60830	172 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540	MIA	Q16674	131 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540	OVOL2	Q9BRP0	275 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540	SPANXA1	Q9NS26	97 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540		X6R8D5	127 aa		10.37	□□□□□ -0.75
NR1H3-231	ENST00000529540		H3BT86	120 aa		10.36	□□□□□ -0.75
NR1H3-231	ENST00000529540		H7C2G1	150 aa		10.36	□□□□□ -0.75
NR1H3-231	ENST00000529540	ANAPC13	Q9BS18	74 aa		10.36	□□□□□ -0.75
NR1H3-231	ENST00000529540	ICOS	Q9Y6W8	199 aa		10.36	□□□□□ -0.75
NR1H3-231	ENST00000529540	DNAH3	Q8TD57	4116 aa		10.36	□□□□□ -0.75
NR1H3-231	ENST00000529540	DAZ2	Q13117	558 aa	Known RBP	10.35	□□□□□ -0.75
NR1H3-231	ENST00000529540	MRPL23	Q16540	153 aa	Known RBP	10.35	□□□□□ -0.75
NR1H3-231	ENST00000529540	C11orf72	Q8NBR9	251 aa		10.35	□□□□□ -0.75
NR1H3-231	ENST00000529540	SVIP	Q8NHG7	77 aa		10.35	□□□□□ -0.75
NR1H3-231	ENST00000529540	NHLRC4	P0CG21	123 aa	Predicted RBP	10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	UBE2W	Q96B02	151 aa		10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	VSIG2	Q96IQ7	327 aa		10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	NDUFA12	Q9UI09	145 aa		10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	TRAV8-4	A0A0B4J246	113 aa		10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	SNCG	O76070	127 aa		10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	IFITM1	P13164	125 aa		10.34	□□□□□ -0.75
NR1H3-231	ENST00000529540	GAGE2B	Q13066	116 aa		10.33	□□□□□ -0.76
NR1H3-231	ENST00000529540	GAGE2E	Q4V326	116 aa		10.33	□□□□□ -0.76
NR1H3-231	ENST00000529540	IL17D	Q8TAD2	202 aa		10.33	□□□□□ -0.76
NR1H3-231	ENST00000529540	CHCHD7	Q9BUK0	85 aa		10.33	□□□□□ -0.76
NR1H3-231	ENST00000529540	C11orf68	Q9H3H3	251 aa	Known RBP	10.33	□□□□□ -0.76
NR1H3-231	ENST00000529540	GAGE2D	Q9UEU5	116 aa		10.33	□□□□□ -0.76
NR1H3-231	ENST00000529540	LYRM9	A8MSI8	78 aa		10.32	□□□□□ -0.76
NR1H3-231	ENST00000529540	COX6C	P09669	75 aa		10.32	□□□□□ -0.76
NR1H3-231	ENST00000529540		Q8NAQ8	132 aa		10.32	□□□□□ -0.76
NR1H3-231	ENST00000529540	UBE2D4	Q9Y2X8	147 aa		10.32	□□□□□ -0.76
NR1H3-231	ENST00000529540	TNFRSF18	Q9Y5U5	241 aa		10.32	□□□□□ -0.76
NR1H3-231	ENST00000529540	TRAV8-3	A0A0A6YYJ7	113 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	IGHV4-28	A0A0C4DH34	117 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	GAGE5	Q13069	117 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	GAGE6	Q13070	117 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	ADAMTSL4-AS1	Q5T5F5	129 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	C2orf82	Q6UX34	121 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	DNAJC30	Q96LL9	226 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540		H7C423	109 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	LST1	O00453	97 aa		10.31	□□□□□ -0.76
NR1H3-231	ENST00000529540	IGLV5-45	A0A087WSX0	123 aa		10.3	□□□□□ -0.76
NR1H3-231	ENST00000529540	FAM240A	A0A1B0GVK7	77 aa		10.3	□□□□□ -0.76
NR1H3-231	ENST00000529540	PLAC8L1	A1L4L8	177 aa		10.3	□□□□□ -0.76
NR1H3-231	ENST00000529540	PRM2	P04554	102 aa		10.3	□□□□□ -0.76
NR1H3-231	ENST00000529540	TIRAP	P58753	221 aa		10.3	□□□□□ -0.76
NR1H3-231	ENST00000529540	TRAV4	A0A0B4J268	109 aa		10.29	□□□□□ -0.76
NR1H3-231	ENST00000529540	TEX49	A0A1B0GTD5	131 aa		10.29	□□□□□ -0.76
NR1H3-231	ENST00000529540	SPART-AS1	P0CW21	52 aa		10.29	□□□□□ -0.76
NR1H3-231	ENST00000529540	NDUFV3	P56181	108 aa	Known RBP	10.29	□□□□□ -0.76
NR1H3-231	ENST00000529540	RETN	Q9HD89	108 aa		10.29	□□□□□ -0.76
NR1H3-231	ENST00000529540	NOP10	Q9NPE3	64 aa	Known RBP	10.29	□□□□□ -0.76
NR1H3-231	ENST00000529540	TRGV1	A0A0A0MS02	117 aa		10.28	□□□□□ -0.76
NR1H3-231	ENST00000529540	NDUFA1	O15239	70 aa		10.28	□□□□□ -0.76
NR1H3-231	ENST00000529540	PRSS2	P07478	247 aa		10.28	□□□□□ -0.76
NR1H3-231	ENST00000529540	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.28	□□□□□ -0.76
NR1H3-231	ENST00000529540	C15orf53	Q8NAA6	179 aa		10.28	□□□□□ -0.76
NR1H3-231	ENST00000529540	IGHV3-73	A0A0B4J1V6	119 aa		10.27	□□□□□ -0.77
NR1H3-231	ENST00000529540	IGHV3-53	P01767	116 aa		10.26	□□□□□ -0.77
NR1H3-231	ENST00000529540	FAM222A	Q5U5X8	452 aa		10.26	□□□□□ -0.77
NR1H3-231	ENST00000529540	LINC00612	Q8N6U2	182 aa		10.26	□□□□□ -0.77
NR1H3-231	ENST00000529540	TRGV2	A0A075B6R0	118 aa		10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	RNASE13	Q5GAN3	156 aa	Known RBP	10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	TTC32	Q5I0X7	151 aa		10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540		Q6ZSN1	163 aa		10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	FAM19A3	Q7Z5A8	133 aa		10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	RS1	O15537	224 aa		10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540		Q6ZTI0	123 aa		10.25	□□□□□ -0.77
NR1H3-231	ENST00000529540	IGLV5-39	A0A0G2JS06	123 aa		10.24	□□□□□ -0.77
NR1H3-231	ENST00000529540	DAD1	P61803	113 aa		10.24	□□□□□ -0.77
NR1H3-231	ENST00000529540	CLEC2B	Q92478	149 aa		10.24	□□□□□ -0.77
NR1H3-231	ENST00000529540		A0A0J9YWU9	116 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	DEFB4A	O15263	64 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	GAGE7	O76087	117 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	GAGE12F	P0CL80	117 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	GAGE12G	P0CL81	117 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	GAGE12I	P0CL82	117 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	COPS9	Q8WXC6	57 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	PPDPF	Q9H3Y8	114 aa		10.23	□□□□□ -0.77
NR1H3-231	ENST00000529540	GAGE12J	A6NER3	117 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	DEFB130B	P0DP73	79 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	DEFB130A	P0DP74	79 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	GAGE4	Q13068	117 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	CIRBP	Q14011	172 aa	Known RBP	10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	TMEM101	Q96IK0	257 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	CDKN2A-AS1	Q9UH64	79 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	HERVK_113	P63121	156 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	C11orf45	Q8TAV5	145 aa		10.22	□□□□□ -0.77
NR1H3-231	ENST00000529540	TRBV7-7	A0A0K0K1E9	115 aa		10.21	□□□□□ -0.78
NR1H3-231	ENST00000529540	LINC00308	Q8TCZ7	52 aa		10.21	□□□□□ -0.78
NR1H3-231	ENST00000529540		Q9UF83	564 aa		10.21	□□□□□ -0.78
NR1H3-231	ENST00000529540	COX7A2L	O14548	114 aa		10.2	□□□□□ -0.78
NR1H3-231	ENST00000529540	ATP5G1	P05496	136 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms