RNA–Protein interactions for RNA: ENST00000528997.5

MVB12A-209, Transcript of multivesicular body subunit 12A, humanhuman

TSL 2

Gene MVB12A, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12A-209ENST00000528997 HIST1H2BOP23527 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST1H2BBP33778 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST1H2BDP58876 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 LINC00310P59036 64 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST1H2BCP62807 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST2H2BEQ16778 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.36□□□□□ -0.43
MVB12A-209ENST00000528997 BAGE3Q86Y29 109 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST1H2BHQ93079 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST1H2BNQ99877 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 HIST1H2BMQ99879 126 aa12.36□□□□□ -0.43
MVB12A-209ENST00000528997 CCL25O15444 150 aa12.35□□□□□ -0.43
MVB12A-209ENST00000528997 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
MVB12A-209ENST00000528997 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
MVB12A-209ENST00000528997 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
MVB12A-209ENST00000528997 HBDP02042 147 aa12.34□□□□□ -0.43
MVB12A-209ENST00000528997 LINC00173Q6ZV60 143 aa12.34□□□□□ -0.43
MVB12A-209ENST00000528997 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
MVB12A-209ENST00000528997 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
MVB12A-209ENST00000528997 AMELXQ99217 191 aa12.34□□□□□ -0.43
MVB12A-209ENST00000528997 SRRM2Q9UQ35 2752 aaKnown RBP12.33□□□□□ -0.44
MVB12A-209ENST00000528997 CNBPP62633 177 aaKnown RBP12.33□□□□□ -0.44
MVB12A-209ENST00000528997 SS18Q15532 418 aa12.33□□□□□ -0.44
MVB12A-209ENST00000528997 PMCHL1Q16048 86 aa12.33□□□□□ -0.44
MVB12A-209ENST00000528997 PDZD11Q5EBL8 140 aa12.33□□□□□ -0.44
MVB12A-209ENST00000528997 CIRBP-AS1Q8TBR5 109 aa12.33□□□□□ -0.44
MVB12A-209ENST00000528997 C1orf196B1AJZ1 125 aa12.32□□□□□ -0.44
MVB12A-209ENST00000528997 SERF1AO75920 110 aa12.32□□□□□ -0.44
MVB12A-209ENST00000528997 PAPPA-AS1Q5QFB9 102 aa12.32□□□□□ -0.44
MVB12A-209ENST00000528997 Q6ZN92 141 aa12.32□□□□□ -0.44
MVB12A-209ENST00000528997 TRAV13-1A0A0B4J241 112 aa12.31□□□□□ -0.44
MVB12A-209ENST00000528997 IFITM10A6NMD0 228 aa12.31□□□□□ -0.44
MVB12A-209ENST00000528997 HSBP1O75506 76 aa12.31□□□□□ -0.44
MVB12A-209ENST00000528997 XCL1P47992 114 aa12.31□□□□□ -0.44
MVB12A-209ENST00000528997 CFAP161Q6P656 301 aa12.31□□□□□ -0.44
MVB12A-209ENST00000528997 TEX43Q6ZNM6 134 aa12.31□□□□□ -0.44
MVB12A-209ENST00000528997 FOXI1Q12951 378 aa12.3□□□□□ -0.44
MVB12A-209ENST00000528997 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
MVB12A-209ENST00000528997 VCX2Q9H322 139 aa12.3□□□□□ -0.44
MVB12A-209ENST00000528997 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.29□□□□□ -0.44
MVB12A-209ENST00000528997 SLPIP03973 132 aa12.29□□□□□ -0.44
MVB12A-209ENST00000528997 ZC2HC1BQ5TFG8 222 aa12.29□□□□□ -0.44
MVB12A-209ENST00000528997 CD164L2Q6UWJ8 174 aa12.29□□□□□ -0.44
MVB12A-209ENST00000528997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.28□□□□□ -0.44
MVB12A-209ENST00000528997 NUPR1O60356 82 aa12.28□□□□□ -0.44
MVB12A-209ENST00000528997 PLA2G1BP04054 148 aaKnown RBP12.28□□□□□ -0.44
MVB12A-209ENST00000528997 UBE2D1P51668 147 aa12.28□□□□□ -0.44
MVB12A-209ENST00000528997 FAM19A3Q7Z5A8 133 aa12.28□□□□□ -0.44
MVB12A-209ENST00000528997 C2orf88Q9BSF0 95 aa12.28□□□□□ -0.44
MVB12A-209ENST00000528997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.28□□□□□ -0.44
MVB12A-209ENST00000528997 COA6Q5JTJ3 125 aaKnown RBP12.27□□□□□ -0.45
MVB12A-209ENST00000528997 SDIM1Q6ZPB5 146 aa12.27□□□□□ -0.45
MVB12A-209ENST00000528997 FAM19A2Q8N3H0 131 aa12.27□□□□□ -0.45
MVB12A-209ENST00000528997 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
MVB12A-209ENST00000528997 PANO1I0J062 215 aa12.26□□□□□ -0.45
MVB12A-209ENST00000528997 ATP5LO75964 103 aa12.26□□□□□ -0.45
MVB12A-209ENST00000528997 LINC00242Q5T6M2 205 aa12.26□□□□□ -0.45
MVB12A-209ENST00000528997 GVQW2A0A096LPI5 108 aaPredicted RBP12.25□□□□□ -0.45
MVB12A-209ENST00000528997 IGHV3OR16-9A0A0B4J2B5 98 aa12.25□□□□□ -0.45
MVB12A-209ENST00000528997 CST9LQ9H4G1 147 aa12.25□□□□□ -0.45
MVB12A-209ENST00000528997 PMVKQ15126 192 aa12.24□□□□□ -0.45
MVB12A-209ENST00000528997 MYCBP2O75592 4640 aa12.22□□□□□ -0.45
MVB12A-209ENST00000528997 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
MVB12A-209ENST00000528997 COX7A2LO14548 114 aa12.22□□□□□ -0.45
MVB12A-209ENST00000528997 COX6A2Q02221 97 aa12.22□□□□□ -0.45
MVB12A-209ENST00000528997 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
MVB12A-209ENST00000528997 IFI27L1Q96BM0 104 aa12.21□□□□□ -0.45
MVB12A-209ENST00000528997 LEPROTL1O95214 131 aa12.2□□□□□ -0.46
MVB12A-209ENST00000528997 SEC11AP67812 179 aa12.2□□□□□ -0.46
MVB12A-209ENST00000528997 CIRBPQ14011 172 aaKnown RBP12.2□□□□□ -0.46
MVB12A-209ENST00000528997 LINC00526Q96FQ7 95 aa12.2□□□□□ -0.46
MVB12A-209ENST00000528997 FLG2Q5D862 2391 aaPredicted RBP12.19□□□□□ -0.46
MVB12A-209ENST00000528997 A0A087WZ39 114 aa12.19□□□□□ -0.46
MVB12A-209ENST00000528997 A0A0J9YXV3 536 aa12.19□□□□□ -0.46
MVB12A-209ENST00000528997 NDUFA6P56556 154 aa12.19□□□□□ -0.46
MVB12A-209ENST00000528997 HERVK_113P63121 156 aa12.19□□□□□ -0.46
MVB12A-209ENST00000528997 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
MVB12A-209ENST00000528997 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
MVB12A-209ENST00000528997 MALP21145 153 aa12.18□□□□□ -0.46
MVB12A-209ENST00000528997 KRTAP10-4P60372 401 aaPredicted RBP12.18□□□□□ -0.46
MVB12A-209ENST00000528997 IGLV5-45A0A087WSX0 123 aa12.17□□□□□ -0.46
MVB12A-209ENST00000528997 TRAV12-1A0A0B4J245 112 aa12.17□□□□□ -0.46
MVB12A-209ENST00000528997 LINC01561Q8N1V8 128 aa12.17□□□□□ -0.46
MVB12A-209ENST00000528997 SPACA4Q8TDM5 124 aa12.17□□□□□ -0.46
MVB12A-209ENST00000528997 PACRGQ96M98 296 aaPredicted RBP12.17□□□□□ -0.46
MVB12A-209ENST00000528997 HSPB8Q9UJY1 196 aa12.17□□□□□ -0.46
MVB12A-209ENST00000528997 ZNF561-AS1K7EIQ3 104 aa12.16□□□□□ -0.46
MVB12A-209ENST00000528997 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
MVB12A-209ENST00000528997 RPL37AP61513 92 aaKnown RBP12.16□□□□□ -0.46
MVB12A-209ENST00000528997 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
MVB12A-209ENST00000528997 CARD19Q96LW7 228 aa12.16□□□□□ -0.46
MVB12A-209ENST00000528997 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
MVB12A-209ENST00000528997 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
MVB12A-209ENST00000528997 A0A087WYN8 130 aa12.15□□□□□ -0.46
MVB12A-209ENST00000528997 IGKV2-24A0A0C4DH68 120 aa12.15□□□□□ -0.46
MVB12A-209ENST00000528997 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
MVB12A-209ENST00000528997 APOMO95445 188 aa12.14□□□□□ -0.47
MVB12A-209ENST00000528997 FABP4P15090 132 aa12.14□□□□□ -0.47
MVB12A-209ENST00000528997 HERC1Q15751 4861 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms