RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 IFITM1P13164 125 aa12.39□□□□□ -0.43
USH1C-205ENST00000527020 UBE2L6O14933 153 aa12.38□□□□□ -0.43
USH1C-205ENST00000527020 LY6G6DO95868 133 aa12.38□□□□□ -0.43
USH1C-205ENST00000527020 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
USH1C-205ENST00000527020 OTOGQ6ZRI0 2925 aa12.37□□□□□ -0.43
USH1C-205ENST00000527020 C9JAW5 83 aa12.37□□□□□ -0.43
USH1C-205ENST00000527020 PF4P02776 101 aa12.37□□□□□ -0.43
USH1C-205ENST00000527020 ZNF625Q96I27 306 aaPredicted RBP12.37□□□□□ -0.43
USH1C-205ENST00000527020 H7C423 109 aa12.36□□□□□ -0.43
USH1C-205ENST00000527020 SLC25A20O43772 301 aa12.36□□□□□ -0.43
USH1C-205ENST00000527020 ANKRD29Q8N6D5 301 aa12.36□□□□□ -0.43
USH1C-205ENST00000527020 SPATA3Q8NHX4 192 aa12.36□□□□□ -0.43
USH1C-205ENST00000527020 PPDPFLQ8WWR9 84 aa12.36□□□□□ -0.43
USH1C-205ENST00000527020 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
USH1C-205ENST00000527020 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
USH1C-205ENST00000527020 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
USH1C-205ENST00000527020 M0QXV9 152 aa12.35□□□□□ -0.43
USH1C-205ENST00000527020 CRLF1O75462 422 aa12.35□□□□□ -0.43
USH1C-205ENST00000527020 LINC00612Q8N6U2 182 aa12.35□□□□□ -0.43
USH1C-205ENST00000527020 LINC00308Q8TCZ7 52 aa12.35□□□□□ -0.43
USH1C-205ENST00000527020 GAGE6Q13070 117 aa12.34□□□□□ -0.43
USH1C-205ENST00000527020 CIRBPQ14011 172 aaKnown RBP12.34□□□□□ -0.43
USH1C-205ENST00000527020 ATXN8Q156A1 80 aa12.34□□□□□ -0.43
USH1C-205ENST00000527020 FN1P02751 2386 aaKnown RBP12.34□□□□□ -0.43
USH1C-205ENST00000527020 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
USH1C-205ENST00000527020 TRBV6-8A0A0A6YYG3 113 aa12.33□□□□□ -0.44
USH1C-205ENST00000527020 LINC01620Q4KN68 170 aa12.33□□□□□ -0.44
USH1C-205ENST00000527020 SOSTDC1Q6X4U4 206 aa12.33□□□□□ -0.44
USH1C-205ENST00000527020 KIR2DL5BQ8NHK3 375 aa12.33□□□□□ -0.44
USH1C-205ENST00000527020 A0A0U1RRA0 63 aa12.33□□□□□ -0.44
USH1C-205ENST00000527020 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
USH1C-205ENST00000527020 CDIP1Q9H305 208 aa12.32□□□□□ -0.44
USH1C-205ENST00000527020 X6R8D5 127 aa12.32□□□□□ -0.44
USH1C-205ENST00000527020 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
USH1C-205ENST00000527020 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
USH1C-205ENST00000527020 PRIMA1Q86XR5 153 aa12.32□□□□□ -0.44
USH1C-205ENST00000527020 NBEAL2Q6ZNJ1 2754 aa12.31□□□□□ -0.44
USH1C-205ENST00000527020 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
USH1C-205ENST00000527020 NSD1Q96L73 2696 aaPredicted RBP12.3□□□□□ -0.44
USH1C-205ENST00000527020 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
USH1C-205ENST00000527020 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
USH1C-205ENST00000527020 INAFM1C9JVW0 142 aa12.28□□□□□ -0.44
USH1C-205ENST00000527020 HERV-K104P63124 156 aa12.28□□□□□ -0.44
USH1C-205ENST00000527020 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
USH1C-205ENST00000527020 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
USH1C-205ENST00000527020 MEIG1Q5JSS6 88 aa12.28□□□□□ -0.44
USH1C-205ENST00000527020 IGHV3OR16-9A0A0B4J2B5 98 aa12.27□□□□□ -0.45
USH1C-205ENST00000527020 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.45
USH1C-205ENST00000527020 COX6CP09669 75 aa12.26□□□□□ -0.45
USH1C-205ENST00000527020 GYPEP15421 78 aa12.26□□□□□ -0.45
USH1C-205ENST00000527020 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
USH1C-205ENST00000527020 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
USH1C-205ENST00000527020 SMIM9A6NGZ8 99 aa12.25□□□□□ -0.45
USH1C-205ENST00000527020 LST1O00453 97 aa12.25□□□□□ -0.45
USH1C-205ENST00000527020 SCGB1A1P11684 91 aa12.25□□□□□ -0.45
USH1C-205ENST00000527020 NOTCH2Q04721 2471 aa12.25□□□□□ -0.45
USH1C-205ENST00000527020 C9orf66Q5T8R8 295 aa12.24□□□□□ -0.45
USH1C-205ENST00000527020 COPS9Q8WXC6 57 aa12.23□□□□□ -0.45
USH1C-205ENST00000527020 PPDPFQ9H3Y8 114 aa12.23□□□□□ -0.45
USH1C-205ENST00000527020 A0A087WZ39 114 aa12.22□□□□□ -0.45
USH1C-205ENST00000527020 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
USH1C-205ENST00000527020 FAM222AQ5U5X8 452 aa12.22□□□□□ -0.45
USH1C-205ENST00000527020 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
USH1C-205ENST00000527020 XGP55808 180 aa12.21□□□□□ -0.45
USH1C-205ENST00000527020 TOMM7Q9P0U1 55 aa12.21□□□□□ -0.45
USH1C-205ENST00000527020 PRO0255Q9UI72 69 aa12.21□□□□□ -0.45
USH1C-205ENST00000527020 TEX49A0A1B0GTD5 131 aa12.2□□□□□ -0.46
USH1C-205ENST00000527020 C2orf82Q6UX34 121 aa12.2□□□□□ -0.46
USH1C-205ENST00000527020 MT-ATP8P03928 68 aa12.19□□□□□ -0.46
USH1C-205ENST00000527020 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
USH1C-205ENST00000527020 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
USH1C-205ENST00000527020 H3BT86 120 aa12.19□□□□□ -0.46
USH1C-205ENST00000527020 MIR7-3HGQ8N6C7 128 aa12.19□□□□□ -0.46
USH1C-205ENST00000527020 HIVEP1P15822 2718 aa12.19□□□□□ -0.46
USH1C-205ENST00000527020 A0A096LPF7 62 aa12.18□□□□□ -0.46
USH1C-205ENST00000527020 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
USH1C-205ENST00000527020 LYRM9A8MSI8 78 aa12.18□□□□□ -0.46
USH1C-205ENST00000527020 DEFB4AO15263 64 aa12.18□□□□□ -0.46
USH1C-205ENST00000527020 COX7A2LO14548 114 aa12.18□□□□□ -0.46
USH1C-205ENST00000527020 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
USH1C-205ENST00000527020 TMEM262E9PQX1 116 aa12.16□□□□□ -0.46
USH1C-205ENST00000527020 PAX4O43316 350 aa12.16□□□□□ -0.46
USH1C-205ENST00000527020 CITED1Q99966 193 aa12.16□□□□□ -0.46
USH1C-205ENST00000527020 TEP1Q99973 2627 aaKnown RBP12.15□□□□□ -0.46
USH1C-205ENST00000527020 IGKV2-28A0A075B6P5 120 aa12.15□□□□□ -0.47
USH1C-205ENST00000527020 IGHV4-28A0A0C4DH34 117 aa12.15□□□□□ -0.47
USH1C-205ENST00000527020 IGKV2D-28P01615 120 aa12.15□□□□□ -0.47
USH1C-205ENST00000527020 TRRAPQ9Y4A5 3859 aa12.14□□□□□ -0.47
USH1C-205ENST00000527020 ATRQ13535 2644 aa12.14□□□□□ -0.47
USH1C-205ENST00000527020 XCL1P47992 114 aa12.14□□□□□ -0.47
USH1C-205ENST00000527020 LINC00337Q8N6G1 96 aa12.14□□□□□ -0.47
USH1C-205ENST00000527020 LINC00158P58513 81 aa12.13□□□□□ -0.47
USH1C-205ENST00000527020 CLPSL2Q6UWE3 100 aa12.13□□□□□ -0.47
USH1C-205ENST00000527020 IBA57-AS1B1ANH7 110 aa12.13□□□□□ -0.47
USH1C-205ENST00000527020 APOC4P55056 127 aa12.13□□□□□ -0.47
USH1C-205ENST00000527020 SND1-IT1Q9HBX3 110 aa12.13□□□□□ -0.47
USH1C-205ENST00000527020 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
USH1C-205ENST00000527020 CCL18P55774 89 aa12.12□□□□□ -0.47
USH1C-205ENST00000527020 SS18Q15532 418 aa12.12□□□□□ -0.47
USH1C-205ENST00000527020 Q8NAQ8 132 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms