RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
C11orf54-204ENST00000527003 IGLV4-3A0A075B6K6 122 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.6□□□□□ -1.99
C11orf54-204ENST00000527003 A0A096LNJ9 63 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 TRAV8-3A0A0A6YYJ7 113 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 TRAV8-4A0A0B4J246 113 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 IGKV2-29A2NJV5 120 aaPredicted RBP2.6□□□□□ -1.99
C11orf54-204ENST00000527003 SYS1-DBNDD2H3BUS1 97 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 PLNP26678 52 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 KRTDAPP60985 99 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 RBX1P62877 108 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 RPL39P62891 51 aaKnown RBP2.6□□□□□ -1.99
C11orf54-204ENST00000527003 SS18Q15532 418 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 TTC32Q5I0X7 151 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 UBE2DNLQ8IWF7 75 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 RMI2Q96E14 147 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 AMELXQ99217 191 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 CST9LQ9H4G1 147 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 Q9H8V8 135 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 CDC42SE2Q9NRR3 84 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 LINC00588Q9Y4M8 146 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 NACAE9PAV3 2078 aa2.6□□□□□ -1.99
C11orf54-204ENST00000527003 COL7A1Q02388 2944 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 TINCRA0A1B0GVN0 87 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 IFITM10A6NMD0 228 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 F8VRH5 84 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 H3BRM9 83 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 CRPP02741 224 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 ANGP03950 147 aaKnown RBP2.59□□□□□ -1.99
C11orf54-204ENST00000527003 C3orf79P0CE67 100 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 HERVK_113P63121 156 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 MIAQ16674 131 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 MPV17L2Q567V2 206 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 CASC10Q5T4H9 136 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 LINC01545Q5VT33 79 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 ZFAND6Q6FIF0 208 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 FAM19A3Q7Z5A8 133 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 NFE4Q86UQ8 179 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 LINC00269Q8N2A0 174 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 OR10D4PQ8NGN7 298 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 BAALCQ8WXS3 180 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 GEMIN7Q9H840 131 aaKnown RBP2.59□□□□□ -1.99
C11orf54-204ENST00000527003 PRR34Q9NV39 138 aa2.59□□□□□ -1.99
C11orf54-204ENST00000527003 CHTOPQ9Y3Y2 248 aaKnown RBP2.59□□□□□ -1.99
C11orf54-204ENST00000527003 IGLV4-60A0A075B6I1 120 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 LINC00959A0A1B0GUT2 108 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 IBA57-AS1B1ANH7 110 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 HSBP1L1C9JCN9 74 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 DPM2O94777 84 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 SCGB1D1O95968 90 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 IGKCP01834 107 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 IGLC3P0DOY3 106 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 UBE2D1P51668 147 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 REG3AQ06141 175 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 JOSD1Q15040 202 aaPredicted RBP2.58□□□□□ -2
C11orf54-204ENST00000527003 CD164L2Q6UWJ8 174 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 Q6ZUT4 128 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 WFDC10BQ8IUB3 73 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 LINC01561Q8N1V8 128 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 Q8N976 141 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 DEFB104AQ8WTQ1 72 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 KLK12Q9UKR0 248 aa2.58□□□□□ -2
C11orf54-204ENST00000527003 TGP01266 2768 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 IGLV5-45A0A087WSX0 123 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 NBDYA0A0U1RRE5 68 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 H0Y8G0 127 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 APOMO95445 188 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 IGHV3-30P01768 117 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 IGHV3-33P01772 117 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 SMIM6P0DI80 62 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 IGHV3-30-3P0DP02 117 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 IGHV3-30-5P0DP03 117 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 HERVK_113P61574 105 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 S100A12P80511 92 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 LINC00242Q5T6M2 205 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 CFAP161Q6P656 301 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 SFTA2Q6UW10 78 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 LINC00173Q6ZV60 143 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 CHCHD10Q8WYQ3 142 aaPredicted RBP2.57□□□□□ -2
C11orf54-204ENST00000527003 FAM104AQ969W3 186 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 UBE2WQ96B02 151 aa2.57□□□□□ -2
C11orf54-204ENST00000527003 OPRPNQ99935 248 aaPredicted RBP2.57□□□□□ -2
C11orf54-204ENST00000527003 MRPL35Q9NZE8 188 aaKnown RBP2.57□□□□□ -2
C11orf54-204ENST00000527003 DNAH7Q8WXX0 4024 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 IGLV4-69A0A075B6H9 119 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 A0A087WZ39 114 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 IGHV3OR16-9A0A0B4J2B5 98 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 A0A0J9YXV3 536 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 LOC105371267A0A1B0GV96 52 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 C11orf86A6NJI1 115 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 F8WDY8 70 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 COX7A2LO14548 114 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 XCL1P47992 114 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 TMEM170BQ5T4T1 132 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 ENHOQ6UWT2 76 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 LINC00469Q8N7U9 141 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 PLEKHB2Q96CS7 222 aa2.56□□□□□ -2
C11orf54-204ENST00000527003 CHAC1Q9BUX1 264 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms