RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 ZNF25P17030 456 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-206ENST00000526966 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
CAPN1-206ENST00000526966 PKIGQ9Y2B9 76 aa11.65□□□□□ -0.54
CAPN1-206ENST00000526966 SRSF9Q13242 221 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN1-206ENST00000526966 REG3GQ6UW15 175 aa11.64□□□□□ -0.55
CAPN1-206ENST00000526966 A0A1B0GUT8 65 aa11.63□□□□□ -0.55
CAPN1-206ENST00000526966 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
CAPN1-206ENST00000526966 ESDP10768 282 aa11.63□□□□□ -0.55
CAPN1-206ENST00000526966 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
CAPN1-206ENST00000526966 GNB1LQ9BYB4 327 aa11.63□□□□□ -0.55
CAPN1-206ENST00000526966 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
CAPN1-206ENST00000526966 XCL1P47992 114 aa11.62□□□□□ -0.55
CAPN1-206ENST00000526966 CARD19Q96LW7 228 aa11.62□□□□□ -0.55
CAPN1-206ENST00000526966 LINC00959A0A1B0GUT2 108 aa11.61□□□□□ -0.55
CAPN1-206ENST00000526966 CCL25O15444 150 aa11.61□□□□□ -0.55
CAPN1-206ENST00000526966 RIGQ13278 110 aa11.61□□□□□ -0.55
CAPN1-206ENST00000526966 Q6ZRP5 223 aa11.61□□□□□ -0.55
CAPN1-206ENST00000526966 LINC00526Q96FQ7 95 aa11.61□□□□□ -0.55
CAPN1-206ENST00000526966 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-206ENST00000526966 PDZD11Q5EBL8 140 aa11.6□□□□□ -0.55
CAPN1-206ENST00000526966 TRBV6-5A0A0K0K1A5 114 aa11.59□□□□□ -0.55
CAPN1-206ENST00000526966 A0A1B0GW15 77 aa11.59□□□□□ -0.55
CAPN1-206ENST00000526966 I3L3M4 83 aa11.59□□□□□ -0.55
CAPN1-206ENST00000526966 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
CAPN1-206ENST00000526966 ATP5L2Q7Z4Y8 100 aa11.58□□□□□ -0.56
CAPN1-206ENST00000526966 TMEM101Q96IK0 257 aa11.58□□□□□ -0.56
CAPN1-206ENST00000526966 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
CAPN1-206ENST00000526966 PMCHP20382 165 aa11.57□□□□□ -0.56
CAPN1-206ENST00000526966 SYCNQ0VAF6 134 aa11.57□□□□□ -0.56
CAPN1-206ENST00000526966 TSHBP01222 138 aa11.56□□□□□ -0.56
CAPN1-206ENST00000526966 PTTG1IPP53801 180 aa11.56□□□□□ -0.56
CAPN1-206ENST00000526966 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
CAPN1-206ENST00000526966 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
CAPN1-206ENST00000526966 MRPL52Q86TS9 123 aaKnown RBP11.56□□□□□ -0.56
CAPN1-206ENST00000526966 TMEM191AQ9H0A3 160 aa11.56□□□□□ -0.56
CAPN1-206ENST00000526966 MRPL18Q9H0U6 180 aaKnown RBP11.56□□□□□ -0.56
CAPN1-206ENST00000526966 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
CAPN1-206ENST00000526966 ZNF561-AS1K7EIQ3 104 aa11.55□□□□□ -0.56
CAPN1-206ENST00000526966 DDTP30046 118 aa11.55□□□□□ -0.56
CAPN1-206ENST00000526966 HBBP68871 147 aa11.55□□□□□ -0.56
CAPN1-206ENST00000526966 SS18Q15532 418 aa11.55□□□□□ -0.56
CAPN1-206ENST00000526966 MRAP2Q96G30 205 aa11.55□□□□□ -0.56
CAPN1-206ENST00000526966 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
CAPN1-206ENST00000526966 CAMPP49913 170 aa11.54□□□□□ -0.56
CAPN1-206ENST00000526966 LPAP08519 4548 aa11.52□□□□□ -0.56
CAPN1-206ENST00000526966 LOC107984640A0A0U1RRK4 108 aa11.52□□□□□ -0.57
CAPN1-206ENST00000526966 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.57
CAPN1-206ENST00000526966 ZNF664Q8N3J9 261 aa11.52□□□□□ -0.57
CAPN1-206ENST00000526966 ST20Q9HBF5 79 aa11.52□□□□□ -0.57
CAPN1-206ENST00000526966 TRBV27A0A0K0K1C4 114 aa11.51□□□□□ -0.57
CAPN1-206ENST00000526966 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
CAPN1-206ENST00000526966 IGLV4-69A0A075B6H9 119 aa11.5□□□□□ -0.57
CAPN1-206ENST00000526966 A0A1W2PNN7 141 aa11.5□□□□□ -0.57
CAPN1-206ENST00000526966 RAB4AP20338 218 aa11.5□□□□□ -0.57
CAPN1-206ENST00000526966 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
CAPN1-206ENST00000526966 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
CAPN1-206ENST00000526966 AMN1Q8IY45 258 aa11.5□□□□□ -0.57
CAPN1-206ENST00000526966 BAGE3Q86Y29 109 aa11.49□□□□□ -0.57
CAPN1-206ENST00000526966 C14orf144Q96I85 54 aa11.48□□□□□ -0.57
CAPN1-206ENST00000526966 PSORS1C2Q9UIG4 136 aa11.48□□□□□ -0.57
CAPN1-206ENST00000526966 COX7A2LO14548 114 aa11.47□□□□□ -0.57
CAPN1-206ENST00000526966 APOMO95445 188 aa11.47□□□□□ -0.57
CAPN1-206ENST00000526966 CSDC2Q9Y534 153 aaKnown RBP11.47□□□□□ -0.57
CAPN1-206ENST00000526966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-206ENST00000526966 MALP21145 153 aa11.46□□□□□ -0.57
CAPN1-206ENST00000526966 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.57
CAPN1-206ENST00000526966 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-206ENST00000526966 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
CAPN1-206ENST00000526966 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
CAPN1-206ENST00000526966 CAMK2N2Q96S95 79 aa11.46□□□□□ -0.57
CAPN1-206ENST00000526966 SERF1AO75920 110 aa11.45□□□□□ -0.58
CAPN1-206ENST00000526966 SCGB1D1O95968 90 aa11.45□□□□□ -0.58
CAPN1-206ENST00000526966 C2orf88Q9BSF0 95 aa11.45□□□□□ -0.58
CAPN1-206ENST00000526966 UBE2D4Q9Y2X8 147 aa11.45□□□□□ -0.58
CAPN1-206ENST00000526966 LINC00310P59036 64 aa11.44□□□□□ -0.58
CAPN1-206ENST00000526966 PPBPP02775 128 aa11.43□□□□□ -0.58
CAPN1-206ENST00000526966 VCYO14598 125 aa11.42□□□□□ -0.58
CAPN1-206ENST00000526966 PPP1R17O96001 155 aa11.42□□□□□ -0.58
CAPN1-206ENST00000526966 CKS2P33552 79 aa11.42□□□□□ -0.58
CAPN1-206ENST00000526966 RNASE13Q5GAN3 156 aaKnown RBP11.42□□□□□ -0.58
CAPN1-206ENST00000526966 PHF5AQ7RTV0 110 aaKnown RBP11.42□□□□□ -0.58
CAPN1-206ENST00000526966 PRO1933Q9H354 126 aa11.42□□□□□ -0.58
CAPN1-206ENST00000526966 NUPR1O60356 82 aa11.41□□□□□ -0.58
CAPN1-206ENST00000526966 FCER1GP30273 86 aa11.41□□□□□ -0.58
CAPN1-206ENST00000526966 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
CAPN1-206ENST00000526966 SMAGPQ0VAQ4 97 aa11.41□□□□□ -0.58
CAPN1-206ENST00000526966 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
CAPN1-206ENST00000526966 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
CAPN1-206ENST00000526966 NRACQ8N912 160 aa11.41□□□□□ -0.58
CAPN1-206ENST00000526966 TRAV13-1A0A0B4J241 112 aa11.4□□□□□ -0.58
CAPN1-206ENST00000526966 D6R8Y8 96 aa11.4□□□□□ -0.58
CAPN1-206ENST00000526966 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
CAPN1-206ENST00000526966 Q6ZUT4 128 aa11.4□□□□□ -0.58
CAPN1-206ENST00000526966 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
CAPN1-206ENST00000526966 ORMDL3Q8N138 153 aa11.4□□□□□ -0.58
CAPN1-206ENST00000526966 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
CAPN1-206ENST00000526966 SPAG11BQ08648 103 aa11.39□□□□□ -0.59
CAPN1-206ENST00000526966 OPRPNQ99935 248 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-206ENST00000526966 TIMM21Q9BVV7 248 aa11.39□□□□□ -0.59
CAPN1-206ENST00000526966 C20orf202A1L168 122 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms