RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 MTORP42345 2549 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 CEP290O15078 2479 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 OVOS2A0A0J9YW53 1432 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 OVOS2Q6IE36 1432 aa-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 RANBP2P49792 3224 aaKnown RBP-0.57□□□□□ -2.5
CSDE1-210ENST00000525878 MGAM2Q2M2H8 2515 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 C4AP0C0L4 1744 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 C4BP0C0L5 1744 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 QSER1Q2KHR3 1735 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 MON2Q7Z3U7 1717 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 FRYQ5TBA9 3013 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 SPINK4O60575 86 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 SIX6O95475 246 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 PPP1R17O96001 155 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 TSPAN19P0C672 248 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 NBEAP1P0C6P0 100 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 IGLC6P0CF74 106 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 CBLN1P23435 193 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 DEFB112Q30KQ8 113 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 SPTSSBQ8NFR3 76 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 FXYD6Q9H0Q3 95 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 MRPL40Q9NQ50 206 aaKnown RBP-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 GINS2Q9Y248 185 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 LENEPQ9Y5L5 61 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 COL12A1Q99715 3063 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 TARBP1Q13395 1621 aaKnown RBP-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 DISP2A7MBM2 1401 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 FHAD1B1AJZ9 1412 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 DIP2CQ9Y2E4 1556 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 ABCA3Q99758 1704 aa-0.58□□□□□ -2.5
CSDE1-210ENST00000525878 C5orf42Q9H799 3197 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 TOP2BQ02880 1626 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 TRIOO75962 3097 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 MYH4Q9Y623 1939 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 CTXND1A0A1B0GTU2 59 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 LINC00959A0A1B0GUT2 108 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 NCR2O95944 276 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 FABP1P07148 127 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 SMIM6P0DI80 62 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 LINC00694P0DN24 101 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 S100A3P33764 101 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 COX17Q14061 63 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 SKA2Q8WVK7 121 aaPredicted RBP-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 AIF1LQ9BQI0 150 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 SAR1AQ9NR31 198 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 NDUFA4L2Q9NRX3 87 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 R4GMQ9 66 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 PPIP5K1Q6PFW1 1433 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 LRRC37AA6NMS7 1700 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 TIAM2Q8IVF5 1701 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 ACACBO00763 2458 aa-0.59□□□□□ -2.5
CSDE1-210ENST00000525878 POLA1P09884 1462 aaPredicted RBP-0.6□□□□□ -2.5
CSDE1-210ENST00000525878 NKTRP30414 1462 aaKnown RBP-0.6□□□□□ -2.5
CSDE1-210ENST00000525878 PKD1L3Q7Z443 1732 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 SETBP1Q9Y6X0 1596 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 TRBV7-4A0A0J9YYF1 115 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 HCG22E2RYF7 251 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 UQCR11O14957 56 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 IL5P05113 134 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 PIPP12273 146 aaPredicted RBP-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 S100GP29377 79 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 CMPK1P30085 196 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 NCS1P62166 190 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 HIST1H1AQ02539 215 aaPredicted RBP-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 CCDC153Q494R4 210 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 S100A7L2Q5SY68 101 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 TMEM170BQ5T4T1 132 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 RPL7L1Q6DKI1 246 aaKnown RBP-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 SPTSSAQ969W0 71 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 SPRR4Q96PI1 79 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 LINC01558Q9Y6Z2 57 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 V9GYH0 126 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 TOPAZ1Q8N9V7 1692 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 EHBP1L1Q8N3D4 1523 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 SCN11AQ9UI33 1791 aa-0.6□□□□□ -2.51
CSDE1-210ENST00000525878 CFTRP13569 1480 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 GRIN2AQ12879 1464 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 C1orf167Q5SNV9 1468 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 MRC2Q9UBG0 1479 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 SHANK2Q9UPX8 1470 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 TLN2Q9Y4G6 2542 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 KNDC1Q76NI1 1749 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 SMG6Q86US8 1419 aaKnown RBP-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 C5P01031 1676 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 USP9XQ93008 2570 aaPredicted RBP-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 TRAV13-2A0A0B4J235 113 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 IGLC7A0M8Q6 106 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 A6NIN4 97 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 F8VRH5 84 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 TSTD3H0UI37 97 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 NDUFB6O95139 128 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 TNFP01375 233 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 BAGE2Q86Y30 109 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 Q8N8P6 123 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 MAFIPQ8WZ33 124 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 NAA60Q9H7X0 242 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 HSPB11Q9Y547 144 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 SLIT1O75093 1534 aa-0.61□□□□□ -2.51
CSDE1-210ENST00000525878 CICQ96RK0 1608 aaPredicted RBP-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms