RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 VCX2Q9H322 139 aa9.77□□□□□ -0.85
SF3B2-202ENST00000524475 LINC00614P0C842 121 aa9.76□□□□□ -0.85
SF3B2-202ENST00000524475 MALP21145 153 aa9.76□□□□□ -0.85
SF3B2-202ENST00000524475 RAB5BP61020 215 aa9.76□□□□□ -0.85
SF3B2-202ENST00000524475 URB1-AS1Q96HZ7 61 aa9.76□□□□□ -0.85
SF3B2-202ENST00000524475 FAM30AQ9NZY2 134 aa9.76□□□□□ -0.85
SF3B2-202ENST00000524475 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
SF3B2-202ENST00000524475 APOMO95445 188 aa9.75□□□□□ -0.85
SF3B2-202ENST00000524475 LINC01620Q4KN68 170 aa9.75□□□□□ -0.85
SF3B2-202ENST00000524475 HIGD2BQ4VC39 106 aa9.75□□□□□ -0.85
SF3B2-202ENST00000524475 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
SF3B2-202ENST00000524475 SCGB3A1Q96QR1 104 aa9.75□□□□□ -0.85
SF3B2-202ENST00000524475 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
SF3B2-202ENST00000524475 OR10D4PQ8NGN7 298 aa9.74□□□□□ -0.85
SF3B2-202ENST00000524475 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 A0A087WZ39 114 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 COLCA2A8K830 154 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 SEC11AP67812 179 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 Q8N1X5 172 aa9.73□□□□□ -0.85
SF3B2-202ENST00000524475 A0A096LNJ9 63 aa9.72□□□□□ -0.85
SF3B2-202ENST00000524475 F8WDY8 70 aa9.72□□□□□ -0.85
SF3B2-202ENST00000524475 HBDP02042 147 aa9.72□□□□□ -0.85
SF3B2-202ENST00000524475 C2orf48Q96LS8 159 aa9.72□□□□□ -0.85
SF3B2-202ENST00000524475 CHAC1Q9BUX1 264 aa9.72□□□□□ -0.85
SF3B2-202ENST00000524475 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
SF3B2-202ENST00000524475 CIRBPQ14011 172 aaKnown RBP9.71□□□□□ -0.86
SF3B2-202ENST00000524475 CHCHD1Q96BP2 118 aaKnown RBP9.71□□□□□ -0.86
SF3B2-202ENST00000524475 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.86
SF3B2-202ENST00000524475 TRGC2P03986 189 aa9.7□□□□□ -0.86
SF3B2-202ENST00000524475 HERVK_113P63121 156 aa9.7□□□□□ -0.86
SF3B2-202ENST00000524475 COX6A2Q02221 97 aa9.7□□□□□ -0.86
SF3B2-202ENST00000524475 ZC2HC1BQ5TFG8 222 aa9.7□□□□□ -0.86
SF3B2-202ENST00000524475 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
SF3B2-202ENST00000524475 IGLV4-69A0A075B6H9 119 aa9.69□□□□□ -0.86
SF3B2-202ENST00000524475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-202ENST00000524475 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
SF3B2-202ENST00000524475 SYCNQ0VAF6 134 aa9.69□□□□□ -0.86
SF3B2-202ENST00000524475 PMVKQ15126 192 aa9.69□□□□□ -0.86
SF3B2-202ENST00000524475 PDZD11Q5EBL8 140 aa9.69□□□□□ -0.86
SF3B2-202ENST00000524475 SCXQ7RTU7 201 aa9.69□□□□□ -0.86
SF3B2-202ENST00000524475 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
SF3B2-202ENST00000524475 KRTAP17-1Q9BYP8 105 aa9.68□□□□□ -0.86
SF3B2-202ENST00000524475 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
SF3B2-202ENST00000524475 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
SF3B2-202ENST00000524475 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
SF3B2-202ENST00000524475 ATP5LO75964 103 aa9.67□□□□□ -0.86
SF3B2-202ENST00000524475 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
SF3B2-202ENST00000524475 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
SF3B2-202ENST00000524475 LINC00526Q96FQ7 95 aa9.67□□□□□ -0.86
SF3B2-202ENST00000524475 IGLV5-45A0A087WSX0 123 aa9.66□□□□□ -0.86
SF3B2-202ENST00000524475 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
SF3B2-202ENST00000524475 GEMIN7Q9H840 131 aaKnown RBP9.66□□□□□ -0.86
SF3B2-202ENST00000524475 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.66□□□□□ -0.86
SF3B2-202ENST00000524475 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
SF3B2-202ENST00000524475 HAMPP81172 84 aa9.65□□□□□ -0.86
SF3B2-202ENST00000524475 KIAA0087Q14695 138 aa9.65□□□□□ -0.86
SF3B2-202ENST00000524475 Q6ZRU5 148 aa9.65□□□□□ -0.86
SF3B2-202ENST00000524475 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
SF3B2-202ENST00000524475 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.86
SF3B2-202ENST00000524475 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.86
SF3B2-202ENST00000524475 PANO1I0J062 215 aa9.64□□□□□ -0.87
SF3B2-202ENST00000524475 SCO1O75880 301 aa9.64□□□□□ -0.87
SF3B2-202ENST00000524475 PMCHL1Q16048 86 aa9.64□□□□□ -0.87
SF3B2-202ENST00000524475 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
SF3B2-202ENST00000524475 CDKN2A-AS1Q9UH64 79 aa9.64□□□□□ -0.87
SF3B2-202ENST00000524475 EPM2AB3EWF7 344 aa9.63□□□□□ -0.87
SF3B2-202ENST00000524475 NDUFA1O15239 70 aa9.63□□□□□ -0.87
SF3B2-202ENST00000524475 HSBP1O75506 76 aa9.63□□□□□ -0.87
SF3B2-202ENST00000524475 SRRM2Q9UQ35 2752 aaKnown RBP9.63□□□□□ -0.87
SF3B2-202ENST00000524475 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
SF3B2-202ENST00000524475 IGLC3P0DOY3 106 aa9.62□□□□□ -0.87
SF3B2-202ENST00000524475 Q5VSD8 79 aa9.62□□□□□ -0.87
SF3B2-202ENST00000524475 Q8IZM0 81 aa9.62□□□□□ -0.87
SF3B2-202ENST00000524475 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
SF3B2-202ENST00000524475 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
SF3B2-202ENST00000524475 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-202ENST00000524475 LINC00310P59036 64 aa9.61□□□□□ -0.87
SF3B2-202ENST00000524475 LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
SF3B2-202ENST00000524475 PACRGQ96M98 296 aaPredicted RBP9.61□□□□□ -0.87
SF3B2-202ENST00000524475 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
SF3B2-202ENST00000524475 A0A096LNI7 61 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 TRAV12-1A0A0B4J245 112 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 SERF1AO75920 110 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 CHTF8P0CG12 524 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 S100A1P23297 94 aa9.6□□□□□ -0.87
SF3B2-202ENST00000524475 PRSS2P07478 247 aa9.59□□□□□ -0.87
SF3B2-202ENST00000524475 PTTG1IPP53801 180 aa9.59□□□□□ -0.87
SF3B2-202ENST00000524475 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
SF3B2-202ENST00000524475 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
SF3B2-202ENST00000524475 A0A087WYN8 130 aa9.58□□□□□ -0.88
SF3B2-202ENST00000524475 H3BRM9 83 aa9.58□□□□□ -0.88
SF3B2-202ENST00000524475 CXCL5P42830 114 aa9.58□□□□□ -0.88
SF3B2-202ENST00000524475 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
SF3B2-202ENST00000524475 UNQ6190/PRO20217Q6UXQ8 127 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms