RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 DNAH17Q9UFH2 4485 aa16■□□□□ 0.15
PVT1-212ENST00000521951 H0Y8G0 127 aa16■□□□□ 0.15
PVT1-212ENST00000521951 HIST1H2BLQ99880 126 aa15.99■□□□□ 0.15
PVT1-212ENST00000521951 IGHV3OR16-9A0A0B4J2B5 98 aa15.99■□□□□ 0.15
PVT1-212ENST00000521951 SEC11AP67812 179 aa15.99■□□□□ 0.15
PVT1-212ENST00000521951 CHTOPQ9Y3Y2 248 aaKnown RBP15.99■□□□□ 0.15
PVT1-212ENST00000521951 TINCRA0A1B0GVN0 87 aa15.98■□□□□ 0.15
PVT1-212ENST00000521951 C5orf38Q86SI9 138 aa15.97■□□□□ 0.15
PVT1-212ENST00000521951 GEMIN7Q9H840 131 aaKnown RBP15.97■□□□□ 0.15
PVT1-212ENST00000521951 IGLV4-69A0A075B6H9 119 aa15.96■□□□□ 0.15
PVT1-212ENST00000521951 LRCOL1A6NCL2 159 aa15.96■□□□□ 0.15
PVT1-212ENST00000521951 IGLC3P0DOY3 106 aa15.96■□□□□ 0.15
PVT1-212ENST00000521951 HERVK_113P63121 156 aa15.96■□□□□ 0.15
PVT1-212ENST00000521951 TNP2Q05952 138 aa15.96■□□□□ 0.15
PVT1-212ENST00000521951 SYS1-DBNDD2H3BUS1 97 aa15.95■□□□□ 0.14
PVT1-212ENST00000521951 COX7A2LO14548 114 aa15.95■□□□□ 0.14
PVT1-212ENST00000521951 C3orf79P0CE67 100 aa15.95■□□□□ 0.14
PVT1-212ENST00000521951 ODF1Q14990 250 aa15.95■□□□□ 0.14
PVT1-212ENST00000521951 MRPL35Q9NZE8 188 aaKnown RBP15.95■□□□□ 0.14
PVT1-212ENST00000521951 LECT2O14960 151 aa15.94■□□□□ 0.14
PVT1-212ENST00000521951 WFDC2Q14508 124 aa15.94■□□□□ 0.14
PVT1-212ENST00000521951 F8VRH5 84 aa15.94■□□□□ 0.14
PVT1-212ENST00000521951 SPATA12Q7Z6I5 190 aa15.94■□□□□ 0.14
PVT1-212ENST00000521951 CDKN2A-AS1Q9UH64 79 aa15.94■□□□□ 0.14
PVT1-212ENST00000521951 A0A087WTM6 91 aa15.93■□□□□ 0.14
PVT1-212ENST00000521951 KRTDAPP60985 99 aa15.93■□□□□ 0.14
PVT1-212ENST00000521951 LINC00336Q6ZUF6 198 aa15.93■□□□□ 0.14
PVT1-212ENST00000521951 CHAC1Q9BUX1 264 aa15.93■□□□□ 0.14
PVT1-212ENST00000521951 A0A087WZ39 114 aa15.92■□□□□ 0.14
PVT1-212ENST00000521951 C11orf86A6NJI1 115 aa15.92■□□□□ 0.14
PVT1-212ENST00000521951 USP17L23D6RBM5 183 aa15.92■□□□□ 0.14
PVT1-212ENST00000521951 IGLV5-45A0A087WSX0 123 aa15.91■□□□□ 0.14
PVT1-212ENST00000521951 MALP21145 153 aa15.91■□□□□ 0.14
PVT1-212ENST00000521951 PET117Q6UWS5 81 aa15.91■□□□□ 0.14
PVT1-212ENST00000521951 LINC00469Q8N7U9 141 aa15.91■□□□□ 0.14
PVT1-212ENST00000521951 PMCHL2Q9BQD1 86 aa15.9■□□□□ 0.14
PVT1-212ENST00000521951 FAT2Q9NYQ8 4349 aa15.9■□□□□ 0.14
PVT1-212ENST00000521951 CFAP161Q6P656 301 aa15.89■□□□□ 0.13
PVT1-212ENST00000521951 C15orf56Q8N910 161 aa15.89■□□□□ 0.13
PVT1-212ENST00000521951 IGHV1-58A0A0C4DH39 117 aa15.88■□□□□ 0.13
PVT1-212ENST00000521951 ZNF22P17026 224 aaPredicted RBP15.88■□□□□ 0.13
PVT1-212ENST00000521951 LINC01545Q5VT33 79 aa15.88■□□□□ 0.13
PVT1-212ENST00000521951 LINC01561Q8N1V8 128 aa15.88■□□□□ 0.13
PVT1-212ENST00000521951 APOMO95445 188 aa15.86■□□□□ 0.13
PVT1-212ENST00000521951 IGHV3-64A0A075B6Q5 118 aa15.85■□□□□ 0.13
PVT1-212ENST00000521951 DPM2O94777 84 aa15.85■□□□□ 0.13
PVT1-212ENST00000521951 TMEM170BQ5T4T1 132 aa15.85■□□□□ 0.13
PVT1-212ENST00000521951 EREGO14944 169 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 PLNP26678 52 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 C14orf177Q52M58 125 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 H3BRM9 83 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 HIGD2BQ4VC39 106 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 Q8N814 137 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 OR10D4PQ8NGN7 298 aa15.84■□□□□ 0.13
PVT1-212ENST00000521951 IGKCP01834 107 aa15.83■□□□□ 0.12
PVT1-212ENST00000521951 SPINK8P0C7L1 97 aa15.83■□□□□ 0.12
PVT1-212ENST00000521951 ORAOV1Q8WV07 137 aa15.83■□□□□ 0.12
PVT1-212ENST00000521951 GVQW2A0A096LPI5 108 aaPredicted RBP15.82■□□□□ 0.12
PVT1-212ENST00000521951 hDV102S1A0JD36 115 aa15.82■□□□□ 0.12
PVT1-212ENST00000521951 SMIM1B2RUZ4 78 aa15.82■□□□□ 0.12
PVT1-212ENST00000521951 C20orf202A1L168 122 aa15.8■□□□□ 0.12
PVT1-212ENST00000521951 LINC00526Q96FQ7 95 aa15.8■□□□□ 0.12
PVT1-212ENST00000521951 DNAH11Q96DT5 4516 aa15.8■□□□□ 0.12
PVT1-212ENST00000521951 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.78■□□□□ 0.12
PVT1-212ENST00000521951 ZNF561-AS1K7EIQ3 104 aa15.78■□□□□ 0.12
PVT1-212ENST00000521951 SPAG11BQ08648 103 aa15.78■□□□□ 0.12
PVT1-212ENST00000521951 TMEM223A0PJW6 202 aa15.78■□□□□ 0.12
PVT1-212ENST00000521951 A0A1B0GVY2 172 aa15.77■□□□□ 0.11
PVT1-212ENST00000521951 KIAA0087Q14695 138 aa15.77■□□□□ 0.11
PVT1-212ENST00000521951 PKD1P98161 4303 aa15.77■□□□□ 0.11
PVT1-212ENST00000521951 IGLV5-39A0A0G2JS06 123 aa15.76■□□□□ 0.11
PVT1-212ENST00000521951 TOMM7Q9P0U1 55 aa15.76■□□□□ 0.11
PVT1-212ENST00000521951 SLPIP03973 132 aa15.75■□□□□ 0.11
PVT1-212ENST00000521951 FUSP35637 526 aaKnown RBP eCLIP15.74■□□□□ 0.11
PVT1-212ENST00000521951 KRTAP10-2P60368 255 aa15.74■□□□□ 0.11
PVT1-212ENST00000521951 NTN5Q8WTR8 489 aaPredicted RBP15.74■□□□□ 0.11
PVT1-212ENST00000521951 Q8IZM0 81 aa15.73■□□□□ 0.11
PVT1-212ENST00000521951 COX7B2Q8TF08 81 aa15.73■□□□□ 0.11
PVT1-212ENST00000521951 PRSS2P07478 247 aa15.73■□□□□ 0.11
PVT1-212ENST00000521951 C2orf48Q96LS8 159 aa15.73■□□□□ 0.11
PVT1-212ENST00000521951 HECTD4Q9Y4D8 3996 aa15.72■□□□□ 0.11
PVT1-212ENST00000521951 C6orf226Q5I0X4 101 aa15.72■□□□□ 0.11
PVT1-212ENST00000521951 ATOH7Q8N100 152 aa15.72■□□□□ 0.11
PVT1-212ENST00000521951 SCGB1D1O95968 90 aa15.71■□□□□ 0.11
PVT1-212ENST00000521951 AKR1D1P51857 326 aa15.71■□□□□ 0.11
PVT1-212ENST00000521951 CNBPP62633 177 aaKnown RBP15.71■□□□□ 0.11
PVT1-212ENST00000521951 CAMK2N2Q96S95 79 aa15.7■□□□□ 0.1
PVT1-212ENST00000521951 PGPEP1Q9NXJ5 209 aa15.7■□□□□ 0.1
PVT1-212ENST00000521951 HERVK_113P61574 105 aa15.69■□□□□ 0.1
PVT1-212ENST00000521951 F8WDY8 70 aa15.68■□□□□ 0.1
PVT1-212ENST00000521951 SYCNQ0VAF6 134 aa15.68■□□□□ 0.1
PVT1-212ENST00000521951 C2orf82Q6UX34 121 aa15.68■□□□□ 0.1
PVT1-212ENST00000521951 STPG4Q8N801 248 aa15.68■□□□□ 0.1
PVT1-212ENST00000521951 IGLV5-52A0A0A0MRZ9 124 aa15.68■□□□□ 0.1
PVT1-212ENST00000521951 Q6ZRU5 148 aa15.68■□□□□ 0.1
PVT1-212ENST00000521951 NDUFA1O15239 70 aa15.67■□□□□ 0.1
PVT1-212ENST00000521951 UNQ6190/PRO20217Q6UXQ8 127 aa15.67■□□□□ 0.1
PVT1-212ENST00000521951 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.66■□□□□ 0.1
PVT1-212ENST00000521951 CKS1BP61024 79 aa15.66■□□□□ 0.1
PVT1-212ENST00000521951 C10orf25Q5T742 122 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms