RNA–Protein interactions for RNA: ENST00000520931.5

TNIP1-208, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-208ENST00000520931 CITED1Q99966 193 aa12.35□□□□□ -0.43
TNIP1-208ENST00000520931 TRAV25A0A0B4J276 109 aa12.34□□□□□ -0.43
TNIP1-208ENST00000520931 UBE2L6O14933 153 aa12.34□□□□□ -0.43
TNIP1-208ENST00000520931 GIG44P09565 113 aaPredicted RBP12.34□□□□□ -0.43
TNIP1-208ENST00000520931 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
TNIP1-208ENST00000520931 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
TNIP1-208ENST00000520931 ANAPC13Q9BS18 74 aa12.34□□□□□ -0.43
TNIP1-208ENST00000520931 F5H768 121 aa12.33□□□□□ -0.44
TNIP1-208ENST00000520931 LRRC75A-AS1Q8N1F1 130 aa12.33□□□□□ -0.44
TNIP1-208ENST00000520931 NBEAL2Q6ZNJ1 2754 aa12.33□□□□□ -0.44
TNIP1-208ENST00000520931 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
TNIP1-208ENST00000520931 H3BT86 120 aa12.33□□□□□ -0.44
TNIP1-208ENST00000520931 GAGE2BQ13066 116 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 GAGE2EQ4V326 116 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 C15orf53Q8NAA6 179 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 TMEM243Q9BU79 118 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 GAGE2DQ9UEU5 116 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 TTC32Q5I0X7 151 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
TNIP1-208ENST00000520931 GAGE6Q13070 117 aa12.31□□□□□ -0.44
TNIP1-208ENST00000520931 CSDC2Q9Y534 153 aaKnown RBP12.31□□□□□ -0.44
TNIP1-208ENST00000520931 ITPR2Q14571 2701 aa12.31□□□□□ -0.44
TNIP1-208ENST00000520931 PLAC8L1A1L4L8 177 aa12.31□□□□□ -0.44
TNIP1-208ENST00000520931 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
TNIP1-208ENST00000520931 TMEM86BQ8N661 226 aa12.3□□□□□ -0.44
TNIP1-208ENST00000520931 TENM4Q6N022 2769 aa12.29□□□□□ -0.44
TNIP1-208ENST00000520931 TRGV4A0A0C4DH28 118 aa12.29□□□□□ -0.44
TNIP1-208ENST00000520931 LINC01006Q8NI28 216 aa12.28□□□□□ -0.44
TNIP1-208ENST00000520931 FAM19A3Q7Z5A8 133 aa12.27□□□□□ -0.44
TNIP1-208ENST00000520931 COX7A2LO14548 114 aa12.27□□□□□ -0.45
TNIP1-208ENST00000520931 IGLV4-60A0A075B6I1 120 aa12.26□□□□□ -0.45
TNIP1-208ENST00000520931 C16orf74Q96GX8 76 aa12.26□□□□□ -0.45
TNIP1-208ENST00000520931 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
TNIP1-208ENST00000520931 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
TNIP1-208ENST00000520931 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
TNIP1-208ENST00000520931 FAM218AQ96MZ4 157 aa12.24□□□□□ -0.45
TNIP1-208ENST00000520931 CHCHD5Q9BSY4 110 aa12.24□□□□□ -0.45
TNIP1-208ENST00000520931 NDUFV3P56181 108 aaKnown RBP12.24□□□□□ -0.45
TNIP1-208ENST00000520931 C19orf73Q9NVV2 129 aa12.24□□□□□ -0.45
TNIP1-208ENST00000520931 HERV-K104P63124 156 aa12.23□□□□□ -0.45
TNIP1-208ENST00000520931 COX7B2Q8TF08 81 aa12.23□□□□□ -0.45
TNIP1-208ENST00000520931 DEFB130BP0DP73 79 aa12.23□□□□□ -0.45
TNIP1-208ENST00000520931 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
TNIP1-208ENST00000520931 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
TNIP1-208ENST00000520931 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
TNIP1-208ENST00000520931 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
TNIP1-208ENST00000520931 TRBV6-4A0A1B0GX49 114 aa12.22□□□□□ -0.45
TNIP1-208ENST00000520931 CSNK1G2-AS1Q8NCQ2 148 aa12.22□□□□□ -0.45
TNIP1-208ENST00000520931 Q9HAA7 133 aa12.22□□□□□ -0.45
TNIP1-208ENST00000520931 PDZD2O15018 2839 aa12.21□□□□□ -0.45
TNIP1-208ENST00000520931 IGLV1-51P01701 117 aa12.21□□□□□ -0.45
TNIP1-208ENST00000520931 LINC00158P58513 81 aa12.21□□□□□ -0.45
TNIP1-208ENST00000520931 HIVEP2P31629 2446 aa12.21□□□□□ -0.45
TNIP1-208ENST00000520931 FHL2Q14192 279 aa12.2□□□□□ -0.46
TNIP1-208ENST00000520931 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
TNIP1-208ENST00000520931 TRBV6-8A0A0A6YYG3 113 aa12.2□□□□□ -0.46
TNIP1-208ENST00000520931 PFN2P35080 140 aa12.2□□□□□ -0.46
TNIP1-208ENST00000520931 BAALC-AS2P0C853 105 aa12.19□□□□□ -0.46
TNIP1-208ENST00000520931 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
TNIP1-208ENST00000520931 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
TNIP1-208ENST00000520931 ANK3Q12955 4377 aaKnown RBP12.19□□□□□ -0.46
TNIP1-208ENST00000520931 B5MCH6 92 aa12.18□□□□□ -0.46
TNIP1-208ENST00000520931 CRPP02741 224 aa12.18□□□□□ -0.46
TNIP1-208ENST00000520931 VWFP04275 2813 aa12.18□□□□□ -0.46
TNIP1-208ENST00000520931 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
TNIP1-208ENST00000520931 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
TNIP1-208ENST00000520931 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
TNIP1-208ENST00000520931 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
TNIP1-208ENST00000520931 CLPSL2Q6UWE3 100 aa12.17□□□□□ -0.46
TNIP1-208ENST00000520931 A0A096LPF7 62 aa12.16□□□□□ -0.46
TNIP1-208ENST00000520931 IGHV3OR16-9A0A0B4J2B5 98 aa12.16□□□□□ -0.46
TNIP1-208ENST00000520931 CCDC179H3BU77 68 aa12.16□□□□□ -0.46
TNIP1-208ENST00000520931 FAM240AA0A1B0GVK7 77 aa12.16□□□□□ -0.46
TNIP1-208ENST00000520931 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
TNIP1-208ENST00000520931 CMC4P56277 68 aaPredicted RBP12.15□□□□□ -0.46
TNIP1-208ENST00000520931 C22orf24Q9Y442 160 aa12.15□□□□□ -0.46
TNIP1-208ENST00000520931 TRACP01848 142 aa12.14□□□□□ -0.47
TNIP1-208ENST00000520931 CCL18P55774 89 aa12.14□□□□□ -0.47
TNIP1-208ENST00000520931 Q6Q795 121 aa12.14□□□□□ -0.47
TNIP1-208ENST00000520931 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
TNIP1-208ENST00000520931 RNASE1P07998 156 aaKnown RBP12.14□□□□□ -0.47
TNIP1-208ENST00000520931 XCL1P47992 114 aa12.14□□□□□ -0.47
TNIP1-208ENST00000520931 FASNP49327 2511 aaKnown RBP12.14□□□□□ -0.47
TNIP1-208ENST00000520931 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
TNIP1-208ENST00000520931 SMIM11BQ8TCY0 68 aa12.13□□□□□ -0.47
TNIP1-208ENST00000520931 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
TNIP1-208ENST00000520931 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
TNIP1-208ENST00000520931 A0A087WYN8 130 aa12.12□□□□□ -0.47
TNIP1-208ENST00000520931 GYPEP15421 78 aa12.12□□□□□ -0.47
TNIP1-208ENST00000520931 ATP5G1P05496 136 aa12.12□□□□□ -0.47
TNIP1-208ENST00000520931 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
TNIP1-208ENST00000520931 C16orf95Q9H693 158 aa12.12□□□□□ -0.47
TNIP1-208ENST00000520931 A0A087WZ39 114 aa12.11□□□□□ -0.47
TNIP1-208ENST00000520931 LINC00959A0A1B0GUT2 108 aa12.11□□□□□ -0.47
TNIP1-208ENST00000520931 PAX4O43316 350 aa12.11□□□□□ -0.47
TNIP1-208ENST00000520931 OR13C6PQ8NH95 151 aa12.11□□□□□ -0.47
TNIP1-208ENST00000520931 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
TNIP1-208ENST00000520931 C6orf226Q5I0X4 101 aa12.1□□□□□ -0.47
TNIP1-208ENST00000520931 FAM110AQ9BQ89 295 aa12.1□□□□□ -0.47
TNIP1-208ENST00000520931 SMR3AQ99954 134 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms