RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SMIM2Q9BVW6 85 aa12.1□□□□□ -0.47
PABPC1-215ENST00000520804 D6R8Y8 96 aa12.09□□□□□ -0.47
PABPC1-215ENST00000520804 PEA15Q15121 130 aa12.09□□□□□ -0.47
PABPC1-215ENST00000520804 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
PABPC1-215ENST00000520804 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
PABPC1-215ENST00000520804 F8W036 122 aa12.08□□□□□ -0.48
PABPC1-215ENST00000520804 S100A8P05109 93 aa12.08□□□□□ -0.48
PABPC1-215ENST00000520804 HBBP68871 147 aa12.08□□□□□ -0.48
PABPC1-215ENST00000520804 MRPL54Q6P161 138 aaKnown RBP12.08□□□□□ -0.48
PABPC1-215ENST00000520804 MRPL35Q9NZE8 188 aaKnown RBP12.08□□□□□ -0.48
PABPC1-215ENST00000520804 PSORS1C2Q9UIG4 136 aa12.08□□□□□ -0.48
PABPC1-215ENST00000520804 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
PABPC1-215ENST00000520804 MRPS36P82909 103 aaKnown RBP12.07□□□□□ -0.48
PABPC1-215ENST00000520804 ORAOV1Q8WV07 137 aa12.07□□□□□ -0.48
PABPC1-215ENST00000520804 SMDT1Q9H4I9 107 aa12.07□□□□□ -0.48
PABPC1-215ENST00000520804 F8WDY8 70 aa12.06□□□□□ -0.48
PABPC1-215ENST00000520804 NPYP01303 97 aa12.06□□□□□ -0.48
PABPC1-215ENST00000520804 MT-ND6P03923 174 aa12.06□□□□□ -0.48
PABPC1-215ENST00000520804 PHF5AQ7RTV0 110 aaKnown RBP12.06□□□□□ -0.48
PABPC1-215ENST00000520804 PPBPP02775 128 aa12.05□□□□□ -0.48
PABPC1-215ENST00000520804 A0A1B0GVG6 124 aa12.04□□□□□ -0.48
PABPC1-215ENST00000520804 IFITM10A6NMD0 228 aa12.04□□□□□ -0.48
PABPC1-215ENST00000520804 IMMP2LQ96T52 175 aa12.04□□□□□ -0.48
PABPC1-215ENST00000520804 NDUFA1O15239 70 aa12.03□□□□□ -0.48
PABPC1-215ENST00000520804 C1orf137Q5JT78 98 aa12.03□□□□□ -0.48
PABPC1-215ENST00000520804 RNF213Q63HN8 5207 aa12.02□□□□□ -0.48
PABPC1-215ENST00000520804 C10orf25Q5T742 122 aa12.02□□□□□ -0.49
PABPC1-215ENST00000520804 ORMDL3Q8N138 153 aa12.02□□□□□ -0.49
PABPC1-215ENST00000520804 TLX1NBP0CAT3 122 aa12.01□□□□□ -0.49
PABPC1-215ENST00000520804 UNQ6190/PRO20217Q6UXQ8 127 aa12.01□□□□□ -0.49
PABPC1-215ENST00000520804 RAB5AP20339 215 aa12□□□□□ -0.49
PABPC1-215ENST00000520804 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
PABPC1-215ENST00000520804 TMEM136Q6ZRR5 245 aa12□□□□□ -0.49
PABPC1-215ENST00000520804 ATP5L2Q7Z4Y8 100 aa12□□□□□ -0.49
PABPC1-215ENST00000520804 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
PABPC1-215ENST00000520804 TGIF2-C20orf24A0A0A6YYL0 155 aa11.99□□□□□ -0.49
PABPC1-215ENST00000520804 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
PABPC1-215ENST00000520804 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
PABPC1-215ENST00000520804 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
PABPC1-215ENST00000520804 A0A087WZ39 114 aa11.98□□□□□ -0.49
PABPC1-215ENST00000520804 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
PABPC1-215ENST00000520804 IGLV7-43P04211 117 aa11.97□□□□□ -0.49
PABPC1-215ENST00000520804 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
PABPC1-215ENST00000520804 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
PABPC1-215ENST00000520804 GAGE2EQ4V326 116 aa11.96□□□□□ -0.49
PABPC1-215ENST00000520804 KRTAP11-1Q8IUC1 163 aa11.96□□□□□ -0.49
PABPC1-215ENST00000520804 GAGE2DQ9UEU5 116 aa11.96□□□□□ -0.49
PABPC1-215ENST00000520804 PRSS47A8MTI9 375 aa11.95□□□□□ -0.5
PABPC1-215ENST00000520804 FAM19A5Q7Z5A7 132 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-215ENST00000520804 DIRC1Q969H9 104 aa11.95□□□□□ -0.5
PABPC1-215ENST00000520804 TMEM141Q96I45 108 aa11.95□□□□□ -0.5
PABPC1-215ENST00000520804 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
PABPC1-215ENST00000520804 LOC389332A0A1B0GUA5 103 aa11.93□□□□□ -0.5
PABPC1-215ENST00000520804 KRTAP7-1Q8IUC3 87 aa11.93□□□□□ -0.5
PABPC1-215ENST00000520804 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
PABPC1-215ENST00000520804 TRBV30A0A0K0K1B3 111 aa11.92□□□□□ -0.5
PABPC1-215ENST00000520804 UBE2D1P51668 147 aa11.92□□□□□ -0.5
PABPC1-215ENST00000520804 TEX43Q6ZNM6 134 aa11.92□□□□□ -0.5
PABPC1-215ENST00000520804 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
PABPC1-215ENST00000520804 H0Y9J4 135 aa11.91□□□□□ -0.5
PABPC1-215ENST00000520804 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
PABPC1-215ENST00000520804 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
PABPC1-215ENST00000520804 NDUFC2-KCTD14E9PQ53 114 aa11.9□□□□□ -0.5
PABPC1-215ENST00000520804 Q8N8P6 123 aa11.9□□□□□ -0.5
PABPC1-215ENST00000520804 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
PABPC1-215ENST00000520804 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
PABPC1-215ENST00000520804 M0QXV9 152 aa11.89□□□□□ -0.51
PABPC1-215ENST00000520804 C2orf66Q6UXQ4 117 aa11.89□□□□□ -0.51
PABPC1-215ENST00000520804 PACRGQ96M98 296 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-215ENST00000520804 UBE2BP63146 152 aa11.88□□□□□ -0.51
PABPC1-215ENST00000520804 PNRC1Q12796 327 aaPredicted RBP11.88□□□□□ -0.51
PABPC1-215ENST00000520804 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
PABPC1-215ENST00000520804 ZC2HC1BQ5TFG8 222 aa11.88□□□□□ -0.51
PABPC1-215ENST00000520804 Q6ZN92 141 aa11.88□□□□□ -0.51
PABPC1-215ENST00000520804 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
PABPC1-215ENST00000520804 AMELXQ99217 191 aa11.88□□□□□ -0.51
PABPC1-215ENST00000520804 LPAP08519 4548 aa11.88□□□□□ -0.51
PABPC1-215ENST00000520804 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
PABPC1-215ENST00000520804 VCX2Q9H322 139 aa11.87□□□□□ -0.51
PABPC1-215ENST00000520804 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
PABPC1-215ENST00000520804 NPSP0C0P6 89 aa11.86□□□□□ -0.51
PABPC1-215ENST00000520804 ORMDL2Q53FV1 153 aa11.86□□□□□ -0.51
PABPC1-215ENST00000520804 K7EMI3 77 aa11.85□□□□□ -0.51
PABPC1-215ENST00000520804 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
PABPC1-215ENST00000520804 PRSS2P07478 247 aa11.84□□□□□ -0.51
PABPC1-215ENST00000520804 KRTAP1-4P0C5Y4 121 aa11.84□□□□□ -0.51
PABPC1-215ENST00000520804 FAM19A3Q7Z5A8 133 aa11.84□□□□□ -0.51
PABPC1-215ENST00000520804 IGLV1-50A0A075B6I6 118 aa11.83□□□□□ -0.52
PABPC1-215ENST00000520804 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
PABPC1-215ENST00000520804 CKS1BP61024 79 aa11.82□□□□□ -0.52
PABPC1-215ENST00000520804 Q8IZM0 81 aa11.82□□□□□ -0.52
PABPC1-215ENST00000520804 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
PABPC1-215ENST00000520804 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
PABPC1-215ENST00000520804 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-215ENST00000520804 HERVK_113P63121 156 aa11.79□□□□□ -0.52
PABPC1-215ENST00000520804 SEC11AP67812 179 aa11.79□□□□□ -0.52
PABPC1-215ENST00000520804 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
PABPC1-215ENST00000520804 LINC00469Q8N7U9 141 aa11.79□□□□□ -0.52
PABPC1-215ENST00000520804 CTDSP1Q9GZU7 261 aa11.79□□□□□ -0.52
PABPC1-215ENST00000520804 CDKN2A-AS1Q9UH64 79 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms