RNA–Protein interactions for RNA: ENST00000519938.5

IKBKB-213, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 2,403 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-213ENST00000519938 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
IKBKB-213ENST00000519938 LINC01600Q96MT4 127 aa12.48□□□□□ -0.41
IKBKB-213ENST00000519938 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
IKBKB-213ENST00000519938 HERV-K104P63124 156 aa12.48□□□□□ -0.41
IKBKB-213ENST00000519938 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
IKBKB-213ENST00000519938 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
IKBKB-213ENST00000519938 PF4P02776 101 aa12.47□□□□□ -0.41
IKBKB-213ENST00000519938 TRBV10-2A0A0K0K1G8 114 aa12.46□□□□□ -0.41
IKBKB-213ENST00000519938 RPL13AP40429 203 aaKnown RBP12.46□□□□□ -0.41
IKBKB-213ENST00000519938 CDIP1Q9H305 208 aa12.46□□□□□ -0.41
IKBKB-213ENST00000519938 NOTCH3Q9UM47 2321 aa12.46□□□□□ -0.42
IKBKB-213ENST00000519938 MTORP42345 2549 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 TRBV6-8A0A0A6YYG3 113 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 KRTAP10-3P60369 221 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 JMJD1CQ15652 2540 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 MEIG1Q5JSS6 88 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 LINC00482Q8N8I6 264 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 SMR3AQ99954 134 aa12.45□□□□□ -0.42
IKBKB-213ENST00000519938 GAGE6Q13070 117 aa12.44□□□□□ -0.42
IKBKB-213ENST00000519938 KIR2DL5BQ8NHK3 375 aa12.44□□□□□ -0.42
IKBKB-213ENST00000519938 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
IKBKB-213ENST00000519938 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
IKBKB-213ENST00000519938 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
IKBKB-213ENST00000519938 PPDPFQ9H3Y8 114 aa12.42□□□□□ -0.42
IKBKB-213ENST00000519938 ITPR2Q14571 2701 aa12.42□□□□□ -0.42
IKBKB-213ENST00000519938 NIPBLQ6KC79 2804 aaeCLIP12.42□□□□□ -0.42
IKBKB-213ENST00000519938 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
IKBKB-213ENST00000519938 LST1O00453 97 aa12.41□□□□□ -0.42
IKBKB-213ENST00000519938 CRLF1O75462 422 aa12.41□□□□□ -0.42
IKBKB-213ENST00000519938 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
IKBKB-213ENST00000519938 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
IKBKB-213ENST00000519938 LINC00612Q8N6U2 182 aa12.41□□□□□ -0.42
IKBKB-213ENST00000519938 NTN5Q8WTR8 489 aaPredicted RBP12.41□□□□□ -0.42
IKBKB-213ENST00000519938 IGLV4-60A0A075B6I1 120 aa12.4□□□□□ -0.42
IKBKB-213ENST00000519938 SOSTDC1Q6X4U4 206 aa12.4□□□□□ -0.42
IKBKB-213ENST00000519938 CLEC2BQ92478 149 aa12.4□□□□□ -0.42
IKBKB-213ENST00000519938 H3BT86 120 aa12.39□□□□□ -0.43
IKBKB-213ENST00000519938 C2orf82Q6UX34 121 aa12.39□□□□□ -0.43
IKBKB-213ENST00000519938 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
IKBKB-213ENST00000519938 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
IKBKB-213ENST00000519938 C2CD3Q4AC94 2353 aa12.39□□□□□ -0.43
IKBKB-213ENST00000519938 LY6G6DO95868 133 aa12.38□□□□□ -0.43
IKBKB-213ENST00000519938 HIVEP2P31629 2446 aa12.38□□□□□ -0.43
IKBKB-213ENST00000519938 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
IKBKB-213ENST00000519938 IGKV3OR2-268A0A0C4DH90 116 aa12.37□□□□□ -0.43
IKBKB-213ENST00000519938 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
IKBKB-213ENST00000519938 SHISA2Q6UWI4 295 aa12.36□□□□□ -0.43
IKBKB-213ENST00000519938 X6R8D5 127 aa12.36□□□□□ -0.43
IKBKB-213ENST00000519938 XGP55808 180 aa12.36□□□□□ -0.43
IKBKB-213ENST00000519938 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
IKBKB-213ENST00000519938 GYPEP15421 78 aa12.35□□□□□ -0.43
IKBKB-213ENST00000519938 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
IKBKB-213ENST00000519938 MT-ATP8P03928 68 aa12.35□□□□□ -0.43
IKBKB-213ENST00000519938 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
IKBKB-213ENST00000519938 A0A087WZ39 114 aa12.34□□□□□ -0.43
IKBKB-213ENST00000519938 COX7A2LO14548 114 aa12.34□□□□□ -0.43
IKBKB-213ENST00000519938 C9orf66Q5T8R8 295 aa12.34□□□□□ -0.43
IKBKB-213ENST00000519938 TOMM7Q9P0U1 55 aa12.34□□□□□ -0.43
IKBKB-213ENST00000519938 PRO0255Q9UI72 69 aa12.33□□□□□ -0.44
IKBKB-213ENST00000519938 LINC00959A0A1B0GUT2 108 aa12.32□□□□□ -0.44
IKBKB-213ENST00000519938 KMT2BQ9UMN6 2715 aaPredicted RBP12.32□□□□□ -0.44
IKBKB-213ENST00000519938 A0A1B0GUV1 79 aa12.31□□□□□ -0.44
IKBKB-213ENST00000519938 TRAV13-2A0A0B4J235 113 aa12.31□□□□□ -0.44
IKBKB-213ENST00000519938 MIR7-3HGQ8N6C7 128 aa12.31□□□□□ -0.44
IKBKB-213ENST00000519938 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
IKBKB-213ENST00000519938 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
IKBKB-213ENST00000519938 IBA57-AS1B1ANH7 110 aa12.29□□□□□ -0.44
IKBKB-213ENST00000519938 FAM222AQ5U5X8 452 aa12.29□□□□□ -0.44
IKBKB-213ENST00000519938 C5orf38Q86SI9 138 aa12.29□□□□□ -0.44
IKBKB-213ENST00000519938 FASNP49327 2511 aaKnown RBP12.29□□□□□ -0.44
IKBKB-213ENST00000519938 LINC00158P58513 81 aa12.29□□□□□ -0.44
IKBKB-213ENST00000519938 SS18Q15532 418 aa12.28□□□□□ -0.44
IKBKB-213ENST00000519938 SND1-IT1Q9HBX3 110 aa12.28□□□□□ -0.44
IKBKB-213ENST00000519938 PAX4O43316 350 aa12.27□□□□□ -0.44
IKBKB-213ENST00000519938 DEFB121Q5J5C9 76 aa12.27□□□□□ -0.44
IKBKB-213ENST00000519938 A0A1B0GV72 72 aa12.27□□□□□ -0.45
IKBKB-213ENST00000519938 INAFM1C9JVW0 142 aa12.27□□□□□ -0.45
IKBKB-213ENST00000519938 CRPP02741 224 aa12.27□□□□□ -0.45
IKBKB-213ENST00000519938 SPATA3Q8NHX4 192 aa12.27□□□□□ -0.45
IKBKB-213ENST00000519938 TRACP01848 142 aa12.26□□□□□ -0.45
IKBKB-213ENST00000519938 APOC4P55056 127 aa12.26□□□□□ -0.45
IKBKB-213ENST00000519938 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
IKBKB-213ENST00000519938 C6orf226Q5I0X4 101 aa12.25□□□□□ -0.45
IKBKB-213ENST00000519938 XCL1P47992 114 aa12.24□□□□□ -0.45
IKBKB-213ENST00000519938 DEFB135Q30KP9 77 aa12.24□□□□□ -0.45
IKBKB-213ENST00000519938 IGKV2-28A0A075B6P5 120 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 IGKV2D-28P01615 120 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 A0A096LPF7 62 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 CCL18P55774 89 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 CKS1BP61024 79 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
IKBKB-213ENST00000519938 FAM240AA0A1B0GVK7 77 aa12.22□□□□□ -0.45
IKBKB-213ENST00000519938 SNCGO76070 127 aa12.22□□□□□ -0.45
IKBKB-213ENST00000519938 PFN2P35080 140 aa12.22□□□□□ -0.45
IKBKB-213ENST00000519938 Q8IZM0 81 aa12.21□□□□□ -0.45
IKBKB-213ENST00000519938 CITED1Q99966 193 aa12.21□□□□□ -0.45
IKBKB-213ENST00000519938 FN1P02751 2386 aaKnown RBP12.21□□□□□ -0.46
IKBKB-213ENST00000519938 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
IKBKB-213ENST00000519938 DEFB4AO15263 64 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms