RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 OR10D4PQ8NGN7 298 aa15.77■□□□□ 0.12
VEGFA-220ENST00000519767 ORMDL3Q8N138 153 aa15.76■□□□□ 0.11
VEGFA-220ENST00000519767 RAB5AP20339 215 aa15.75■□□□□ 0.11
VEGFA-220ENST00000519767 FAM104AQ969W3 186 aa15.75■□□□□ 0.11
VEGFA-220ENST00000519767 SPAG11BQ08648 103 aa15.74■□□□□ 0.11
VEGFA-220ENST00000519767 TMEM136Q6ZRR5 245 aa15.74■□□□□ 0.11
VEGFA-220ENST00000519767 IGHV3OR16-9A0A0B4J2B5 98 aa15.73■□□□□ 0.11
VEGFA-220ENST00000519767 REG3GQ6UW15 175 aa15.73■□□□□ 0.11
VEGFA-220ENST00000519767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.72■□□□□ 0.11
VEGFA-220ENST00000519767 SRSF9Q13242 221 aaKnown RBP eCLIP15.72■□□□□ 0.11
VEGFA-220ENST00000519767 PRELID3AQ96N28 172 aa15.72■□□□□ 0.11
VEGFA-220ENST00000519767 OPRPNQ99935 248 aaPredicted RBP15.72■□□□□ 0.11
VEGFA-220ENST00000519767 UBR4Q5T4S7 5183 aa15.71■□□□□ 0.11
VEGFA-220ENST00000519767 A0A1W2PNN7 141 aa15.7■□□□□ 0.1
VEGFA-220ENST00000519767 IFITM10A6NMD0 228 aa15.7■□□□□ 0.1
VEGFA-220ENST00000519767 ORAOV1Q8WV07 137 aa15.7■□□□□ 0.1
VEGFA-220ENST00000519767 MRPL35Q9NZE8 188 aaKnown RBP15.7■□□□□ 0.1
VEGFA-220ENST00000519767 PYGO1Q9Y3Y4 419 aa15.7■□□□□ 0.1
VEGFA-220ENST00000519767 PRSS47A8MTI9 375 aa15.69■□□□□ 0.1
VEGFA-220ENST00000519767 IFI27P40305 119 aaPredicted RBP15.69■□□□□ 0.1
VEGFA-220ENST00000519767 IMMP2LQ96T52 175 aa15.69■□□□□ 0.1
VEGFA-220ENST00000519767 LAMTOR2Q9Y2Q5 125 aa15.69■□□□□ 0.1
VEGFA-220ENST00000519767 RPL18AQ02543 176 aaKnown RBP15.68■□□□□ 0.1
VEGFA-220ENST00000519767 PNRC1Q12796 327 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-220ENST00000519767 C9orf116Q5BN46 136 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-220ENST00000519767 A0A0J9YXV3 536 aa15.67■□□□□ 0.1
VEGFA-220ENST00000519767 NDUFA1O15239 70 aa15.67■□□□□ 0.1
VEGFA-220ENST00000519767 MT-ND4LP03901 98 aa15.67■□□□□ 0.1
VEGFA-220ENST00000519767 TGIF2-C20orf24A0A0A6YYL0 155 aa15.66■□□□□ 0.1
VEGFA-220ENST00000519767 ANAPC16Q96DE5 110 aa15.66■□□□□ 0.1
VEGFA-220ENST00000519767 RAB14P61106 215 aa15.64■□□□□ 0.09
VEGFA-220ENST00000519767 A0A087WZ39 114 aa15.63■□□□□ 0.09
VEGFA-220ENST00000519767 KRTAP10-8P60410 259 aa15.63■□□□□ 0.09
VEGFA-220ENST00000519767 MAP1LC3AQ9H492 121 aa15.63■□□□□ 0.09
VEGFA-220ENST00000519767 MT-ND6P03923 174 aa15.62■□□□□ 0.09
VEGFA-220ENST00000519767 TMEM141Q96I45 108 aa15.62■□□□□ 0.09
VEGFA-220ENST00000519767 TNXBP22105 4242 aa15.61■□□□□ 0.09
VEGFA-220ENST00000519767 IGLV4-3A0A075B6K6 122 aa15.61■□□□□ 0.09
VEGFA-220ENST00000519767 LOC389332A0A1B0GUA5 103 aa15.61■□□□□ 0.09
VEGFA-220ENST00000519767 TLX1NBP0CAT3 122 aa15.61■□□□□ 0.09
VEGFA-220ENST00000519767 LINC00242Q5T6M2 205 aa15.61■□□□□ 0.09
VEGFA-220ENST00000519767 PSORS1C2Q9UIG4 136 aa15.61■□□□□ 0.09
VEGFA-220ENST00000519767 UNQ6190/PRO20217Q6UXQ8 127 aa15.6■□□□□ 0.09
VEGFA-220ENST00000519767 Q8N8P6 123 aa15.6■□□□□ 0.09
VEGFA-220ENST00000519767 C10orf25Q5T742 122 aa15.59■□□□□ 0.09
VEGFA-220ENST00000519767 TEX43Q6ZNM6 134 aa15.59■□□□□ 0.09
VEGFA-220ENST00000519767 K7EMI3 77 aa15.58■□□□□ 0.08
VEGFA-220ENST00000519767 PHF5AQ7RTV0 110 aaKnown RBP15.58■□□□□ 0.08
VEGFA-220ENST00000519767 LINC01561Q8N1V8 128 aa15.58■□□□□ 0.08
VEGFA-220ENST00000519767 CYSLTR1Q9Y271 337 aa15.58■□□□□ 0.08
VEGFA-220ENST00000519767 KIAA0087Q14695 138 aa15.57■□□□□ 0.08
VEGFA-220ENST00000519767 ORMDL2Q53FV1 153 aa15.57■□□□□ 0.08
VEGFA-220ENST00000519767 C2orf88Q9BSF0 95 aa15.57■□□□□ 0.08
VEGFA-220ENST00000519767 C6orf48Q9UBA6 75 aa15.57■□□□□ 0.08
VEGFA-220ENST00000519767 NPSP0C0P6 89 aa15.56■□□□□ 0.08
VEGFA-220ENST00000519767 Q6ZN92 141 aa15.56■□□□□ 0.08
VEGFA-220ENST00000519767 UBE2D1P51668 147 aa15.55■□□□□ 0.08
VEGFA-220ENST00000519767 C1orf137Q5JT78 98 aa15.55■□□□□ 0.08
VEGFA-220ENST00000519767 C2orf66Q6UXQ4 117 aa15.55■□□□□ 0.08
VEGFA-220ENST00000519767 VCX2Q9H322 139 aa15.55■□□□□ 0.08
VEGFA-220ENST00000519767 TRBV30A0A0K0K1B3 111 aa15.54■□□□□ 0.08
VEGFA-220ENST00000519767 G0S2P27469 103 aa15.53■□□□□ 0.08
VEGFA-220ENST00000519767 AMELXQ99217 191 aa15.52■□□□□ 0.08
VEGFA-220ENST00000519767 NXT2Q9NPJ8 142 aaKnown RBP15.52■□□□□ 0.08
VEGFA-220ENST00000519767 GAGE2EQ4V326 116 aa15.51■□□□□ 0.07
VEGFA-220ENST00000519767 PACRGQ96M98 296 aaPredicted RBP15.51■□□□□ 0.07
VEGFA-220ENST00000519767 CTDSP1Q9GZU7 261 aa15.51■□□□□ 0.07
VEGFA-220ENST00000519767 GAGE2DQ9UEU5 116 aa15.51■□□□□ 0.07
VEGFA-220ENST00000519767 FAM168BA1KXE4 195 aa15.49■□□□□ 0.07
VEGFA-220ENST00000519767 IGIPA6NJ69 53 aa15.49■□□□□ 0.07
VEGFA-220ENST00000519767 PAPPA-AS1Q5QFB9 102 aa15.49■□□□□ 0.07
VEGFA-220ENST00000519767 NDUFC2-KCTD14E9PQ53 114 aa15.48■□□□□ 0.07
VEGFA-220ENST00000519767 IGLV7-43P04211 117 aa15.48■□□□□ 0.07
VEGFA-220ENST00000519767 C2orf82Q6UX34 121 aa15.48■□□□□ 0.07
VEGFA-220ENST00000519767 LINC00173Q6ZV60 143 aa15.48■□□□□ 0.07
VEGFA-220ENST00000519767 DIRC1Q969H9 104 aa15.48■□□□□ 0.07
VEGFA-220ENST00000519767 PRSS2P07478 247 aa15.47■□□□□ 0.07
VEGFA-220ENST00000519767 SEC11AP67812 179 aa15.47■□□□□ 0.07
VEGFA-220ENST00000519767 CLLU1Q5K131 121 aa15.47■□□□□ 0.07
VEGFA-220ENST00000519767 FAM19A3Q7Z5A8 133 aa15.47■□□□□ 0.07
VEGFA-220ENST00000519767 FAM19A5Q7Z5A7 132 aaPredicted RBP15.46■□□□□ 0.07
VEGFA-220ENST00000519767 ODF1Q14990 250 aa15.45■□□□□ 0.06
VEGFA-220ENST00000519767 C6orf226Q5I0X4 101 aa15.45■□□□□ 0.06
VEGFA-220ENST00000519767 ZC2HC1BQ5TFG8 222 aa15.45■□□□□ 0.06
VEGFA-220ENST00000519767 CKS1BP61024 79 aa15.44■□□□□ 0.06
VEGFA-220ENST00000519767 LRP2P98164 4655 aa15.44■□□□□ 0.06
VEGFA-220ENST00000519767 TRAV9-1A0A075B6T8 112 aa15.42■□□□□ 0.06
VEGFA-220ENST00000519767 HERVK_113P63121 156 aa15.42■□□□□ 0.06
VEGFA-220ENST00000519767 UQCC3Q6UW78 93 aa15.42■□□□□ 0.06
VEGFA-220ENST00000519767 TIMM17AQ99595 171 aa15.42■□□□□ 0.06
VEGFA-220ENST00000519767 M0QXV9 152 aa15.41■□□□□ 0.06
VEGFA-220ENST00000519767 KRTAP7-1Q8IUC3 87 aa15.41■□□□□ 0.06
VEGFA-220ENST00000519767 Q8IZM0 81 aa15.41■□□□□ 0.06
VEGFA-220ENST00000519767 TOMM6Q96B49 74 aa15.41■□□□□ 0.06
VEGFA-220ENST00000519767 ALKBH7Q9BT30 221 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-220ENST00000519767 TOMM7Q9P0U1 55 aa15.41■□□□□ 0.06
VEGFA-220ENST00000519767 UBE2BP63146 152 aa15.4■□□□□ 0.06
VEGFA-220ENST00000519767 KRTAP11-1Q8IUC1 163 aa15.4■□□□□ 0.06
VEGFA-220ENST00000519767 GEMIN7Q9H840 131 aaKnown RBP15.4■□□□□ 0.06
VEGFA-220ENST00000519767 C9orf129Q5T035 196 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms