RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
VEGFA-219ENST00000518824 TGIF2-C20orf24A0A0A6YYL0 155 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 ZNF561-AS1K7EIQ3 104 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 S100PP25815 95 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 RHEBQ15382 184 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
VEGFA-219ENST00000518824 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
VEGFA-219ENST00000518824 MAJINQ3KP22 176 aa8.41□□□□□ -1.06
VEGFA-219ENST00000518824 LINC00242Q5T6M2 205 aa8.41□□□□□ -1.06
VEGFA-219ENST00000518824 DPH3Q96FX2 82 aa8.41□□□□□ -1.06
VEGFA-219ENST00000518824 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
VEGFA-219ENST00000518824 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-219ENST00000518824 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
VEGFA-219ENST00000518824 A0A0J9YXV3 536 aa8.4□□□□□ -1.06
VEGFA-219ENST00000518824 APOC3P02656 99 aa8.4□□□□□ -1.06
VEGFA-219ENST00000518824 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.06
VEGFA-219ENST00000518824 NXT2Q9NPJ8 142 aaKnown RBP8.4□□□□□ -1.06
VEGFA-219ENST00000518824 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
VEGFA-219ENST00000518824 UBE2D1P51668 147 aa8.39□□□□□ -1.07
VEGFA-219ENST00000518824 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
VEGFA-219ENST00000518824 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
VEGFA-219ENST00000518824 ORMDL2Q53FV1 153 aa8.39□□□□□ -1.07
VEGFA-219ENST00000518824 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
VEGFA-219ENST00000518824 AMELXQ99217 191 aa8.39□□□□□ -1.07
VEGFA-219ENST00000518824 PKHD1L1Q86WI1 4243 aa8.38□□□□□ -1.07
VEGFA-219ENST00000518824 FABP9Q0Z7S8 132 aa8.38□□□□□ -1.07
VEGFA-219ENST00000518824 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
VEGFA-219ENST00000518824 STPG4Q8N801 248 aa8.38□□□□□ -1.07
VEGFA-219ENST00000518824 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
VEGFA-219ENST00000518824 TEX43Q6ZNM6 134 aa8.37□□□□□ -1.07
VEGFA-219ENST00000518824 TOMM6Q96B49 74 aa8.37□□□□□ -1.07
VEGFA-219ENST00000518824 A0A087WZ39 114 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 LINC01546A6NGU7 62 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.36□□□□□ -1.07
VEGFA-219ENST00000518824 K7EMI3 77 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 APOMO95445 188 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 GAGE2BQ13066 116 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 KIAA0087Q14695 138 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 URB1-AS1Q96HZ7 61 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
VEGFA-219ENST00000518824 PTTG1IPP53801 180 aa8.35□□□□□ -1.07
VEGFA-219ENST00000518824 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
VEGFA-219ENST00000518824 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
VEGFA-219ENST00000518824 VCX2Q9H322 139 aa8.35□□□□□ -1.07
VEGFA-219ENST00000518824 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
VEGFA-219ENST00000518824 A0A1W2PNN7 141 aa8.34□□□□□ -1.07
VEGFA-219ENST00000518824 MT-ND6P03923 174 aa8.34□□□□□ -1.07
VEGFA-219ENST00000518824 COX19Q49B96 90 aa8.34□□□□□ -1.07
VEGFA-219ENST00000518824 Q6ZN92 141 aa8.34□□□□□ -1.07
VEGFA-219ENST00000518824 SVBPQ8N300 66 aa8.34□□□□□ -1.07
VEGFA-219ENST00000518824 A0A096LNJ9 63 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 SNAPINO95295 136 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 SCGB3A1Q96QR1 104 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 TRAPPC1Q9Y5R8 145 aa8.33□□□□□ -1.08
VEGFA-219ENST00000518824 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
VEGFA-219ENST00000518824 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
VEGFA-219ENST00000518824 ERASQ7Z444 233 aa8.32□□□□□ -1.08
VEGFA-219ENST00000518824 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
VEGFA-219ENST00000518824 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
VEGFA-219ENST00000518824 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
VEGFA-219ENST00000518824 NPSP0C0P6 89 aa8.31□□□□□ -1.08
VEGFA-219ENST00000518824 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
VEGFA-219ENST00000518824 NDUFA5Q16718 116 aa8.31□□□□□ -1.08
VEGFA-219ENST00000518824 FA2HQ7L5A8 372 aa8.31□□□□□ -1.08
VEGFA-219ENST00000518824 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
VEGFA-219ENST00000518824 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
VEGFA-219ENST00000518824 KRTAP29-1A8MX34 341 aaPredicted RBP8.3□□□□□ -1.08
VEGFA-219ENST00000518824 NDUFA1O15239 70 aa8.3□□□□□ -1.08
VEGFA-219ENST00000518824 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
VEGFA-219ENST00000518824 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
VEGFA-219ENST00000518824 CBLN2Q8IUK8 224 aa8.3□□□□□ -1.08
VEGFA-219ENST00000518824 Q6ZRP5 223 aa8.29□□□□□ -1.08
VEGFA-219ENST00000518824 SMCO4Q9NRQ5 59 aa8.29□□□□□ -1.08
VEGFA-219ENST00000518824 TOMM7Q9P0U1 55 aa8.29□□□□□ -1.08
VEGFA-219ENST00000518824 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
VEGFA-219ENST00000518824 FAM168BA1KXE4 195 aa8.28□□□□□ -1.08
VEGFA-219ENST00000518824 J3QL48 77 aa8.28□□□□□ -1.08
VEGFA-219ENST00000518824 G0S2P27469 103 aa8.28□□□□□ -1.08
VEGFA-219ENST00000518824 PRR3P79522 188 aaKnown RBP8.28□□□□□ -1.08
VEGFA-219ENST00000518824 LINC01561Q8N1V8 128 aa8.28□□□□□ -1.08
VEGFA-219ENST00000518824 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
VEGFA-219ENST00000518824 HERC1Q15751 4861 aa8.27□□□□□ -1.09
VEGFA-219ENST00000518824 LINC00614P0C842 121 aa8.27□□□□□ -1.09
VEGFA-219ENST00000518824 HERVK_113P63121 156 aa8.27□□□□□ -1.09
VEGFA-219ENST00000518824 PHF5AQ7RTV0 110 aaKnown RBP8.27□□□□□ -1.09
VEGFA-219ENST00000518824 KRTAP7-1Q8IUC3 87 aa8.27□□□□□ -1.09
VEGFA-219ENST00000518824 C7orf33Q8WU49 177 aa8.27□□□□□ -1.09
VEGFA-219ENST00000518824 F8WDY8 70 aa8.26□□□□□ -1.09
VEGFA-219ENST00000518824 TLX1NBP0CAT3 122 aa8.26□□□□□ -1.09
VEGFA-219ENST00000518824 GAGE2EQ4V326 116 aa8.26□□□□□ -1.09
VEGFA-219ENST00000518824 PAPPA-AS1Q5QFB9 102 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms