RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 PGPEP1Q9NXJ5 209 aa16.23■□□□□ 0.19
SLIT3-204ENST00000518140 PRO0461Q9UI25 63 aa16.23■□□□□ 0.19
SLIT3-204ENST00000518140 CSDC2Q9Y534 153 aaKnown RBP16.23■□□□□ 0.19
SLIT3-204ENST00000518140 J3QR89 54 aa16.22■□□□□ 0.19
SLIT3-204ENST00000518140 C11orf68Q9H3H3 251 aaKnown RBP16.22■□□□□ 0.19
SLIT3-204ENST00000518140 CDC42SE2Q9NRR3 84 aa16.22■□□□□ 0.19
SLIT3-204ENST00000518140 ZNF22P17026 224 aaPredicted RBP16.22■□□□□ 0.19
SLIT3-204ENST00000518140 CHCHD5Q9BSY4 110 aa16.22■□□□□ 0.19
SLIT3-204ENST00000518140 Q6ZTC4 211 aa16.2■□□□□ 0.18
SLIT3-204ENST00000518140 ETDBQ3ZM63 59 aa16.19■□□□□ 0.18
SLIT3-204ENST00000518140 SH2D6Q7Z4S9 175 aa16.19■□□□□ 0.18
SLIT3-204ENST00000518140 IGLV4-60A0A075B6I1 120 aa16.18■□□□□ 0.18
SLIT3-204ENST00000518140 TM2D3Q9BRN9 247 aa16.18■□□□□ 0.18
SLIT3-204ENST00000518140 H7C423 109 aa16.18■□□□□ 0.18
SLIT3-204ENST00000518140 NANOS2P60321 138 aaKnown RBP16.18■□□□□ 0.18
SLIT3-204ENST00000518140 HUWE1Q7Z6Z7 4374 aaKnown RBP16.18■□□□□ 0.18
SLIT3-204ENST00000518140 TMEM223A0PJW6 202 aa16.17■□□□□ 0.18
SLIT3-204ENST00000518140 TSPEAR-AS2P59090 65 aa16.17■□□□□ 0.18
SLIT3-204ENST00000518140 TSPAN13O95857 204 aa16.17■□□□□ 0.18
SLIT3-204ENST00000518140 COX6A2Q02221 97 aa16.17■□□□□ 0.18
SLIT3-204ENST00000518140 IGHV3-64A0A075B6Q5 118 aa16.16■□□□□ 0.18
SLIT3-204ENST00000518140 TINCRA0A1B0GVN0 87 aa16.16■□□□□ 0.18
SLIT3-204ENST00000518140 TMEM238C9JI98 176 aa16.16■□□□□ 0.18
SLIT3-204ENST00000518140 TMEM101Q96IK0 257 aa16.16■□□□□ 0.18
SLIT3-204ENST00000518140 SPATA25Q9BR10 227 aa16.16■□□□□ 0.18
SLIT3-204ENST00000518140 TRAV13-1A0A0B4J241 112 aa16.15■□□□□ 0.18
SLIT3-204ENST00000518140 J3QQQ9 107 aa16.15■□□□□ 0.18
SLIT3-204ENST00000518140 IGHV3-30P01768 117 aa16.15■□□□□ 0.18
SLIT3-204ENST00000518140 IGHV3-30-5P0DP03 117 aa16.15■□□□□ 0.18
SLIT3-204ENST00000518140 MTURNQ8N3F0 131 aa16.15■□□□□ 0.18
SLIT3-204ENST00000518140 APOMO95445 188 aa16.14■□□□□ 0.17
SLIT3-204ENST00000518140 MRPL23Q16540 153 aaKnown RBP16.14■□□□□ 0.17
SLIT3-204ENST00000518140 LGALS3P17931 250 aaKnown RBP16.14■□□□□ 0.17
SLIT3-204ENST00000518140 LINC00242Q5T6M2 205 aa16.14■□□□□ 0.17
SLIT3-204ENST00000518140 SIGMAR1Q99720 223 aa16.14■□□□□ 0.17
SLIT3-204ENST00000518140 GAGE12HA6NDE8 117 aa16.13■□□□□ 0.17
SLIT3-204ENST00000518140 C11orf45Q8TAV5 145 aa16.13■□□□□ 0.17
SLIT3-204ENST00000518140 TMEM262E9PQX1 116 aa16.12■□□□□ 0.17
SLIT3-204ENST00000518140 SMAGPQ0VAQ4 97 aa16.12■□□□□ 0.17
SLIT3-204ENST00000518140 LYRM7Q5U5X0 104 aa16.12■□□□□ 0.17
SLIT3-204ENST00000518140 ICOSQ9Y6W8 199 aa16.12■□□□□ 0.17
SLIT3-204ENST00000518140 LEPROTO15243 131 aa16.12■□□□□ 0.17
SLIT3-204ENST00000518140 GEMIN7Q9H840 131 aaKnown RBP16.12■□□□□ 0.17
SLIT3-204ENST00000518140 CDKN2A-AS1Q9UH64 79 aa16.12■□□□□ 0.17
SLIT3-204ENST00000518140 TRAV8-3A0A0A6YYJ7 113 aa16.11■□□□□ 0.17
SLIT3-204ENST00000518140 LOC107984156A0A0G2JMH3 177 aa16.11■□□□□ 0.17
SLIT3-204ENST00000518140 ARL17AQ8IVW1 177 aa16.11■□□□□ 0.17
SLIT3-204ENST00000518140 IGKV3OR2-268A0A0C4DH90 116 aa16.1■□□□□ 0.17
SLIT3-204ENST00000518140 CFC1BP0CG36 223 aa16.1■□□□□ 0.17
SLIT3-204ENST00000518140 CFC1P0CG37 223 aa16.1■□□□□ 0.17
SLIT3-204ENST00000518140 PSMB2P49721 201 aa16.1■□□□□ 0.17
SLIT3-204ENST00000518140 Q8N3U1 123 aa16.1■□□□□ 0.17
SLIT3-204ENST00000518140 TIRAPP58753 221 aa16.1■□□□□ 0.17
SLIT3-204ENST00000518140 SPINK8P0C7L1 97 aa16.09■□□□□ 0.17
SLIT3-204ENST00000518140 SCGB1A1P11684 91 aa16.09■□□□□ 0.17
SLIT3-204ENST00000518140 SMCPP49901 116 aaPredicted RBP16.09■□□□□ 0.17
SLIT3-204ENST00000518140 FAM19A3Q7Z5A8 133 aa16.07■□□□□ 0.16
SLIT3-204ENST00000518140 IGLV5-45A0A087WSX0 123 aa16.07■□□□□ 0.16
SLIT3-204ENST00000518140 C10orf126Q8N4M7 172 aa16.07■□□□□ 0.16
SLIT3-204ENST00000518140 IGHV3-30-3P0DP02 117 aa16.06■□□□□ 0.16
SLIT3-204ENST00000518140 SFTA2Q6UW10 78 aa16.06■□□□□ 0.16
SLIT3-204ENST00000518140 TRBV20-1A0A075B6N2 111 aa16.06■□□□□ 0.16
SLIT3-204ENST00000518140 DEFB131BA0A096LNP1 70 aa16.06■□□□□ 0.16
SLIT3-204ENST00000518140 PRO1854Q9UHT4 67 aa16.06■□□□□ 0.16
SLIT3-204ENST00000518140 A0A1B0GUV1 79 aa16.05■□□□□ 0.16
SLIT3-204ENST00000518140 FOXI1Q12951 378 aa16.05■□□□□ 0.16
SLIT3-204ENST00000518140 LYPD5Q6UWN5 251 aa16.05■□□□□ 0.16
SLIT3-204ENST00000518140 HERVK_113P63121 156 aa16.04■□□□□ 0.16
SLIT3-204ENST00000518140 DNHD1Q96M86 4753 aa16.04■□□□□ 0.16
SLIT3-204ENST00000518140 IGHV1-58A0A0C4DH39 117 aa16.03■□□□□ 0.16
SLIT3-204ENST00000518140 DNAH9Q9NYC9 4486 aa16.03■□□□□ 0.16
SLIT3-204ENST00000518140 H3BNG1 76 aa16.03■□□□□ 0.16
SLIT3-204ENST00000518140 TCL1BO95988 128 aa16.03■□□□□ 0.16
SLIT3-204ENST00000518140 LELP1Q5T871 98 aa16.03■□□□□ 0.16
SLIT3-204ENST00000518140 COL7A1Q02388 2944 aa16.02■□□□□ 0.16
SLIT3-204ENST00000518140 CLPSL2Q6UWE3 100 aa16.02■□□□□ 0.15
SLIT3-204ENST00000518140 A4D1N5 150 aa16.01■□□□□ 0.15
SLIT3-204ENST00000518140 LINC00959A0A1B0GUT2 108 aa15.99■□□□□ 0.15
SLIT3-204ENST00000518140 SCGB1C2P0DMR2 95 aa15.98■□□□□ 0.15
SLIT3-204ENST00000518140 LINC00269Q8N2A0 174 aa15.98■□□□□ 0.15
SLIT3-204ENST00000518140 A0A0B4J2C4 111 aa15.98■□□□□ 0.15
SLIT3-204ENST00000518140 SMIM1B2RUZ4 78 aa15.98■□□□□ 0.15
SLIT3-204ENST00000518140 MUSTN1Q8IVN3 82 aa15.98■□□□□ 0.15
SLIT3-204ENST00000518140 IGHV3-33P01772 117 aa15.96■□□□□ 0.15
SLIT3-204ENST00000518140 TEN1Q86WV5 123 aa15.96■□□□□ 0.15
SLIT3-204ENST00000518140 IGLV5-39A0A0G2JS06 123 aa15.96■□□□□ 0.15
SLIT3-204ENST00000518140 A0A0J9YXY3 114 aa15.96■□□□□ 0.15
SLIT3-204ENST00000518140 EIF4EBP3O60516 100 aaPredicted RBP15.96■□□□□ 0.15
SLIT3-204ENST00000518140 ANGP03950 147 aaKnown RBP15.96■□□□□ 0.15
SLIT3-204ENST00000518140 ESRGQ1W209 222 aa15.96■□□□□ 0.15
SLIT3-204ENST00000518140 PPDPFLQ8WWR9 84 aa15.96■□□□□ 0.15
SLIT3-204ENST00000518140 STAB2Q8WWQ8 2551 aa15.95■□□□□ 0.14
SLIT3-204ENST00000518140 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.95■□□□□ 0.14
SLIT3-204ENST00000518140 ERG28Q9UKR5 140 aa15.95■□□□□ 0.14
SLIT3-204ENST00000518140 IGHV3OR16-9A0A0B4J2B5 98 aa15.94■□□□□ 0.14
SLIT3-204ENST00000518140 CARD19Q96LW7 228 aa15.93■□□□□ 0.14
SLIT3-204ENST00000518140 B9D2Q9BPU9 175 aa15.93■□□□□ 0.14
SLIT3-204ENST00000518140 NDUFA12Q9UI09 145 aa15.93■□□□□ 0.14
SLIT3-204ENST00000518140 TRAV10A0A0B4J240 114 aa15.93■□□□□ 0.14
SLIT3-204ENST00000518140 XCL1P47992 114 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms